View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10513_low_8 (Length: 320)
Name: NF10513_low_8
Description: NF10513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10513_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 18 - 311
Target Start/End: Complemental strand, 27739453 - 27739155
Alignment:
| Q |
18 |
gatgttgcacagaatgagcctgcataaattggctgagaatctgaaaagaaaaaataatgtcagactagtgtcatagtgataaaatataagagacattaat |
117 |
Q |
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| T |
27739453 |
gatgttgcacagaatgagcctgcataaattggctgagaatctgaaaagaaaaaataatgtcagactagtgtcataatgataaaatataagagacattaat |
27739354 |
T |
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| Q |
118 |
tgatctatcataaaatgctcagttataataagacatttttggttag-----atgattttgttattatgaatacaaaagagaatcttttgcaaggagttag |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27739353 |
tgatctatcataaaatgctcagttataataagacatttttggttaggttagatgattttgttattatgaatacaaaagagaatcttttgcaaggagttag |
27739254 |
T |
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| Q |
213 |
acataactaaatttgaggaatttaagtgacatgtggcatgtgattcaataggcaatgattggtgtgtagaaaattgatgagaatctctttttccctttg |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
27739253 |
acataactaaatttgaggaatttaagtgacatgtggcatgtgattcaataggcaatgattggtgtgtagaaaattgatgagaatctctttttccttttg |
27739155 |
T |
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