View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10513_low_9 (Length: 278)
Name: NF10513_low_9
Description: NF10513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10513_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 2 - 262
Target Start/End: Complemental strand, 43857410 - 43857150
Alignment:
| Q |
2 |
ttagcttgatgctttctttattttcaattggtagattttctcctaaccattttttatatctgatcaaagaaaaacaaatagataatcaaaagtcatttca |
101 |
Q |
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| T |
43857410 |
ttagcttgatgctttctttattttcaattggtagattttctcctaaccattttttatatctgatcaaagaaaaataaatagataatcaaaagtcatttct |
43857311 |
T |
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| Q |
102 |
taagtatcaaatcattttcattaacccaaataataagactactaaaaccaatttagaattataaaaaattcaagtgtatttagtctaaattttacagtaa |
201 |
Q |
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| T |
43857310 |
taagtatcaaatcattttcattaacccaaataataagactgctaaaaccaatttagaattataaaaaattcaagtgtatttagtctaaattttacagtaa |
43857211 |
T |
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| Q |
202 |
ataagtttgactctttagatcttttttgtttacatttcaatttggaatgagtacataatat |
262 |
Q |
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| T |
43857210 |
ataagtttgactctttagttcttttttgtttacatttcaatttggaatgagtacataatat |
43857150 |
T |
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