View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10515_high_5 (Length: 241)

Name: NF10515_high_5
Description: NF10515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10515_high_5
NF10515_high_5
[»] chr5 (57 HSPs)
chr5 (1-189)||(15675352-15675540)
chr5 (1-189)||(35468942-35469130)
chr5 (1-188)||(30249004-30249191)
chr5 (1-189)||(34444005-34444194)
chr5 (28-191)||(14832697-14832860)
chr5 (28-192)||(2476431-2476595)
chr5 (1-194)||(33006946-33007118)
chr5 (51-189)||(15504038-15504176)
chr5 (1-189)||(34846406-34846573)
chr5 (79-189)||(1672375-1672485)
chr5 (1-189)||(7161972-7162148)
chr5 (1-173)||(32953572-32953732)
chr5 (6-189)||(43228531-43228702)
chr5 (74-189)||(13942641-13942755)
chr5 (75-189)||(16567904-16568018)
chr5 (74-189)||(12267271-12267385)
chr5 (74-189)||(36234443-36234558)
chr5 (51-187)||(6900856-6900992)
chr5 (94-189)||(21069153-21069248)
chr5 (99-189)||(37552051-37552141)
chr5 (99-189)||(37654881-37654971)
chr5 (1-60)||(16667499-16667558)
chr5 (1-60)||(15503955-15504014)
chr5 (80-154)||(767416-767490)
chr5 (99-173)||(37779780-37779854)
chr5 (1-60)||(17192675-17192734)
chr5 (1-60)||(21069048-21069107)
chr5 (99-173)||(37607573-37607647)
chr5 (1-60)||(767321-767380)
chr5 (139-189)||(25034985-25035035)
chr5 (5-58)||(7159609-7159662)
chr5 (104-189)||(8214527-8214612)
chr5 (1-41)||(42989573-42989613)
chr5 (142-189)||(2985872-2985919)
chr5 (138-189)||(4306673-4306724)
chr5 (138-189)||(15497447-15497498)
chr5 (6-53)||(16567847-16567894)
chr5 (51-134)||(17192570-17192651)
chr5 (1-60)||(36234588-36234647)
chr5 (1-55)||(12267420-12267474)
chr5 (1-53)||(1672499-1672551)
chr5 (142-193)||(204121-204172)
chr5 (24-55)||(13942790-13942821)
chr5 (9-60)||(15436041-15436091)
chr5 (151-190)||(31649079-31649118)
chr5 (6-53)||(37607513-37607560)
chr5 (6-53)||(37779720-37779767)
chr5 (137-188)||(42989673-42989724)
chr5 (138-192)||(17330967-17331021)
chr5 (150-192)||(36704749-36704791)
chr5 (142-192)||(39435868-39435918)
chr5 (51-97)||(39605801-39605847)
chr5 (31-60)||(13695092-13695121)
chr5 (138-183)||(14317151-14317196)
chr5 (138-186)||(192894-192942)
chr5 (28-60)||(6900800-6900832)
chr5 (149-189)||(38397550-38397590)
[»] chr1 (39 HSPs)
chr1 (1-190)||(14727369-14727558)
chr1 (1-189)||(27583905-27584089)
chr1 (1-186)||(37153881-37154066)
chr1 (1-189)||(25007503-25007691)
chr1 (1-189)||(44305451-44305639)
chr1 (1-188)||(25011426-25011612)
chr1 (28-189)||(1428307-1428468)
chr1 (1-190)||(27460735-27460906)
chr1 (1-189)||(31844529-31844696)
chr1 (51-176)||(4641938-4642063)
chr1 (1-189)||(6331725-6331892)
chr1 (94-188)||(33468860-33468954)
chr1 (1-192)||(8239330-8239502)
chr1 (75-190)||(4774085-4774200)
chr1 (1-189)||(24646092-24646275)
chr1 (94-191)||(34459253-34459350)
chr1 (101-190)||(9527196-9527285)
chr1 (100-183)||(49898526-49898609)
chr1 (1-186)||(24745451-24745629)
chr1 (94-189)||(6801972-6802067)
chr1 (1-173)||(44238749-44238934)
chr1 (18-76)||(33468951-33469009)
chr1 (1-55)||(48940438-48940492)
chr1 (5-60)||(9527088-9527143)
chr1 (80-154)||(48940328-48940402)
chr1 (3-59)||(34459150-34459206)
chr1 (6-40)||(4774051-4774085)
chr1 (1-60)||(6802113-6802176)
chr1 (1-58)||(4642089-4642146)
chr1 (138-173)||(17875579-17875614)
chr1 (150-193)||(37575150-37575193)
chr1 (150-189)||(42817784-42817823)
chr1 (150-188)||(11647352-11647390)
chr1 (87-117)||(48940386-48940416)
chr1 (138-187)||(3830102-3830151)
chr1 (51-96)||(34459231-34459276)
chr1 (28-57)||(49898442-49898471)
chr1 (142-190)||(26159376-26159424)
chr1 (28-60)||(33169338-33169370)
[»] chr4 (54 HSPs)
chr4 (1-189)||(4728598-4728786)
chr4 (1-188)||(10715695-10715883)
chr4 (1-188)||(10929465-10929653)
chr4 (4-191)||(4552228-4552415)
chr4 (1-199)||(2017315-2017513)
chr4 (1-189)||(40969264-40969452)
chr4 (1-189)||(46645643-46645831)
chr4 (1-192)||(2576211-2576403)
chr4 (1-188)||(10058577-10058743)
chr4 (56-189)||(32005978-32006111)
chr4 (1-186)||(31364175-31364339)
chr4 (82-189)||(52373875-52373982)
chr4 (51-183)||(2521792-2521924)
chr4 (73-186)||(43003075-43003188)
chr4 (1-190)||(9003607-9003784)
chr4 (1-189)||(41972330-41972513)
chr4 (94-190)||(25237721-25237817)
chr4 (74-190)||(50383987-50384102)
chr4 (80-159)||(50099989-50100068)
chr4 (101-194)||(11826931-11827024)
chr4 (69-156)||(1585777-1585864)
chr4 (1-60)||(25237616-25237675)
chr4 (99-189)||(14044462-14044552)
chr4 (1-168)||(49745079-49745263)
chr4 (99-186)||(32828281-32828368)
chr4 (1-55)||(8901843-8901897)
chr4 (99-188)||(9694204-9694291)
chr4 (1-53)||(9694139-9694191)
chr4 (1-53)||(14044397-14044449)
chr4 (1-60)||(2521948-2522007)
chr4 (6-60)||(31929048-31929102)
chr4 (1-60)||(36947558-36947617)
chr4 (2-51)||(50383929-50383978)
chr4 (138-194)||(5516928-5516984)
chr4 (1-60)||(50099880-50099939)
chr4 (1-60)||(52373778-52373837)
chr4 (151-193)||(24974528-24974570)
chr4 (119-189)||(36947650-36947720)
chr4 (141-187)||(42843980-42844026)
chr4 (142-194)||(43357064-43357116)
chr4 (138-189)||(12211085-12211136)
chr4 (138-181)||(25182742-25182785)
chr4 (142-189)||(26438240-26438287)
chr4 (138-189)||(37236117-37236168)
chr4 (5-60)||(41955269-41955324)
chr4 (138-189)||(49908216-49908267)
chr4 (138-188)||(48131134-48131184)
chr4 (139-188)||(10351871-10351920)
chr4 (143-191)||(6689214-6689262)
chr4 (142-190)||(20130398-20130446)
chr4 (138-182)||(26449845-26449889)
chr4 (28-60)||(42739869-42739901)
chr4 (74-126)||(43003156-43003208)
chr4 (140-188)||(55464518-55464566)
[»] chr8 (34 HSPs)
chr8 (2-188)||(36406378-36406564)
chr8 (1-189)||(28928098-28928287)
chr8 (1-189)||(3383907-3384095)
chr8 (1-189)||(24965072-24965239)
chr8 (73-173)||(34282764-34282864)
chr8 (87-186)||(35384256-35384355)
chr8 (80-186)||(27321753-27321859)
chr8 (99-190)||(38214863-38214954)
chr8 (73-177)||(13243242-13243346)
chr8 (1-60)||(13243133-13243192)
chr8 (5-61)||(34282913-34282969)
chr8 (1-60)||(39431679-39431738)
chr8 (138-189)||(21958779-21958830)
chr8 (138-190)||(36409652-36409704)
chr8 (1-45)||(27321882-27321926)
chr8 (6-54)||(31500854-31500902)
chr8 (74-126)||(34282832-34282884)
chr8 (67-115)||(39431591-39431639)
chr8 (150-189)||(8968569-8968608)
chr8 (138-189)||(17839594-17839645)
chr8 (5-60)||(21138075-21138130)
chr8 (138-190)||(27046968-27047020)
chr8 (138-189)||(5637567-5637618)
chr8 (138-189)||(13152253-13152304)
chr8 (74-117)||(13243222-13243265)
chr8 (151-189)||(16594824-16594862)
chr8 (151-189)||(24592196-24592234)
chr8 (142-192)||(29632544-29632594)
chr8 (142-192)||(39915670-39915720)
chr8 (11-60)||(24674618-24674667)
chr8 (101-154)||(31500736-31500789)
chr8 (138-186)||(10014312-10014360)
chr8 (139-191)||(30791347-30791399)
chr8 (1-53)||(38214798-38214850)
[»] chr2 (43 HSPs)
chr2 (1-189)||(6799773-6799961)
chr2 (5-189)||(41114757-41114941)
chr2 (1-189)||(29257406-29257594)
chr2 (1-190)||(13203807-13203996)
chr2 (1-159)||(18299060-18299218)
chr2 (1-189)||(17148821-17149024)
chr2 (73-189)||(41010624-41010740)
chr2 (51-189)||(303979-304117)
chr2 (1-190)||(22572608-22572776)
chr2 (51-189)||(12000646-12000785)
chr2 (99-190)||(2475944-2476035)
chr2 (94-189)||(17249463-17249558)
chr2 (80-185)||(25563091-25563196)
chr2 (67-189)||(15651346-15651468)
chr2 (1-57)||(12000563-12000619)
chr2 (104-186)||(16220919-16221001)
chr2 (6-60)||(25562980-25563034)
chr2 (3-60)||(304141-304198)
chr2 (100-173)||(33909250-33909323)
chr2 (20-96)||(2475886-2475962)
chr2 (1-57)||(15651247-15651303)
chr2 (94-154)||(45444376-45444436)
chr2 (1-59)||(17249358-17249416)
chr2 (1-60)||(41010515-41010574)
chr2 (138-188)||(42755571-42755621)
chr2 (150-189)||(1542853-1542892)
chr2 (138-189)||(26161698-26161749)
chr2 (5-60)||(34756735-34756790)
chr2 (142-188)||(4554296-4554342)
chr2 (5-59)||(15429222-15429276)
chr2 (1-59)||(33909359-33909417)
chr2 (138-187)||(8058306-8058355)
chr2 (142-187)||(26655688-26655733)
chr2 (138-189)||(34526586-34526637)
chr2 (138-188)||(18425814-18425864)
chr2 (80-126)||(25563070-25563116)
chr2 (151-189)||(31162097-31162135)
chr2 (27-60)||(13654790-13654823)
chr2 (143-192)||(22483775-22483824)
chr2 (142-190)||(6402767-6402815)
chr2 (28-60)||(9011436-9011468)
chr2 (13-53)||(29759855-29759895)
chr2 (150-186)||(34756941-34756977)
[»] chr6 (21 HSPs)
chr6 (1-182)||(9696095-9696276)
chr6 (5-189)||(2941266-2941450)
chr6 (1-188)||(23663648-23663835)
chr6 (1-174)||(34248916-34249089)
chr6 (8-189)||(15122090-15122271)
chr6 (2-187)||(15528987-15529172)
chr6 (1-185)||(9046807-9046991)
chr6 (3-188)||(10397698-10397866)
chr6 (1-187)||(1780933-1781098)
chr6 (51-192)||(31188197-31188338)
chr6 (75-173)||(28614308-28614406)
chr6 (51-176)||(2836068-2836193)
chr6 (1-173)||(14938826-14938986)
chr6 (58-188)||(31200045-31200176)
chr6 (74-186)||(34188911-34189023)
chr6 (99-189)||(339476-339566)
chr6 (83-188)||(2960794-2960899)
chr6 (1-60)||(339375-339434)
chr6 (5-60)||(2836217-2836272)
chr6 (138-189)||(21148896-21148947)
chr6 (138-190)||(26218296-26218348)
[»] scaffold0618 (1 HSPs)
scaffold0618 (1-189)||(1735-1923)
[»] chr3 (40 HSPs)
chr3 (2-186)||(7501002-7501186)
chr3 (1-189)||(28311322-28311510)
chr3 (1-188)||(14461110-14461297)
chr3 (1-186)||(53651943-53652128)
chr3 (1-190)||(44047629-44047817)
chr3 (27-189)||(12909899-12910059)
chr3 (28-195)||(43700075-43700242)
chr3 (1-188)||(26370931-26371097)
chr3 (1-191)||(37516687-37516856)
chr3 (60-186)||(33178983-33179109)
chr3 (74-189)||(41218243-41218358)
chr3 (1-189)||(25391733-25391900)
chr3 (1-60)||(33179141-33179200)
chr3 (99-189)||(53987974-53988065)
chr3 (101-189)||(26278475-26278563)
chr3 (1-60)||(53068287-53068346)
chr3 (1-59)||(41218389-41218447)
chr3 (1-53)||(35077269-35077321)
chr3 (1-53)||(53987909-53987961)
chr3 (5-58)||(38239502-38239555)
chr3 (1-53)||(26278408-26278460)
chr3 (99-155)||(41358541-41358597)
chr3 (130-189)||(35077641-35077700)
chr3 (139-192)||(31989295-31989348)
chr3 (138-195)||(48757328-48757385)
chr3 (138-194)||(6891511-6891567)
chr3 (1-53)||(9600395-9600447)
chr3 (138-189)||(6929867-6929918)
chr3 (138-189)||(19269162-19269213)
chr3 (139-190)||(21434441-21434492)
chr3 (139-190)||(53710664-53710715)
chr3 (3-60)||(36869966-36870023)
chr3 (20-60)||(43447620-43447660)
chr3 (142-189)||(39772948-39772995)
chr3 (99-145)||(9600460-9600506)
chr3 (21-59)||(41358632-41358670)
chr3 (8-60)||(497401-497453)
chr3 (142-190)||(22967394-22967442)
chr3 (99-135)||(41199857-41199893)
chr3 (28-60)||(41199946-41199978)
[»] scaffold0075 (2 HSPs)
scaffold0075 (3-189)||(11565-11751)
scaffold0075 (3-184)||(6952-7132)
[»] chr7 (47 HSPs)
chr7 (1-189)||(35300316-35300504)
chr7 (1-176)||(23704370-23704545)
chr7 (1-189)||(26722847-26723014)
chr7 (74-188)||(4843432-4843546)
chr7 (75-189)||(22206574-22206688)
chr7 (75-189)||(22228051-22228165)
chr7 (6-192)||(5991305-5991479)
chr7 (73-188)||(21932631-21932746)
chr7 (73-189)||(28693891-28694007)
chr7 (1-173)||(7873124-7873284)
chr7 (94-190)||(3012454-3012550)
chr7 (94-191)||(814859-814956)
chr7 (58-188)||(21688244-21688375)
chr7 (74-188)||(19377523-19377638)
chr7 (108-174)||(41759530-41759596)
chr7 (1-189)||(38991064-38991236)
chr7 (5-61)||(41759624-41759680)
chr7 (99-186)||(25688102-25688189)
chr7 (1-58)||(21688154-21688211)
chr7 (2-58)||(21932798-21932854)
chr7 (1-60)||(28694057-28694116)
chr7 (1-60)||(42439591-42439650)
chr7 (99-189)||(30852447-30852537)
chr7 (104-173)||(42439466-42439535)
chr7 (1-60)||(3012349-3012408)
chr7 (1-60)||(38129010-38129069)
chr7 (2-60)||(4843344-4843402)
chr7 (98-182)||(38128876-38128960)
chr7 (1-60)||(815002-815061)
chr7 (2-57)||(19377435-19377490)
chr7 (94-189)||(41862234-41862329)
chr7 (1-53)||(30852382-30852434)
chr7 (138-189)||(19400247-19400298)
chr7 (6-53)||(25688202-25688249)
chr7 (139-189)||(27387165-27387215)
chr7 (6-42)||(22206709-22206745)
chr7 (6-42)||(22227994-22228030)
chr7 (142-189)||(38575127-38575174)
chr7 (138-193)||(45197906-45197961)
chr7 (51-105)||(38128932-38128986)
chr7 (51-96)||(3012432-3012477)
chr7 (138-189)||(22937701-22937752)
chr7 (138-189)||(37001214-37001265)
chr7 (138-189)||(38826023-38826074)
chr7 (151-189)||(20965955-20965993)
chr7 (12-60)||(1756821-1756869)
chr7 (142-194)||(36631983-36632035)
[»] scaffold0638 (2 HSPs)
scaffold0638 (101-189)||(4217-4305)
scaffold0638 (6-53)||(4155-4202)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-188)||(109192-109375)
scaffold0021 (103-173)||(112108-112179)
[»] scaffold0015 (1 HSPs)
scaffold0015 (138-189)||(214018-214069)
[»] scaffold0178 (2 HSPs)
scaffold0178 (138-193)||(21940-21995)
scaffold0178 (138-193)||(27442-27497)
[»] scaffold0170 (1 HSPs)
scaffold0170 (138-190)||(9343-9396)
[»] scaffold0108 (1 HSPs)
scaffold0108 (99-135)||(20928-20964)
[»] scaffold0002 (1 HSPs)
scaffold0002 (142-190)||(479417-479465)


Alignment Details
Target: chr5 (Bit Score: 173; Significance: 4e-93; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 15675352 - 15675540
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||| |    
T  15675352 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaagttccgcaggaaagatatatccgaaggaaatgtgaaattatctac 15675451  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15675452 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 15675540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 35468942 - 35469130
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  35468942 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtagaaaatgtgaaattatctgc 35469041  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  35469042 aggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataaattttttgcccaggctctataaaattcctggctcagccactg 35469130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 30249004 - 30249191
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30249004 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgc 30249103  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    || ||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||| |||||||||| ||||| |||||    
T  30249104 agaaaatgtgaaattatttgcaggaagaaagcaacgttttgcgataaattttttgcccagactctgtaaaattcctggctccaccact 30249191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 34444005 - 34444194
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||| ||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  34444005 ttttgtctaaattccgcaagaaatgcatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgc 34444104  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa-attttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||    
T  34444105 aggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataattttttttgcccaggctctctaaaattcctagctccgccactg 34444194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 28 - 191
Target Start/End: Complemental strand, 14832860 - 14832697
Alignment:
Q  28 tttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaag 127  Q
    ||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14832860 tttcctgtagattttgccaaggatttagattccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaag 14832761  T
Q  128 gaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgct 191  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  14832760 gaagtaatgttttgcgataaattttttgcccagactctataaaatttctggctccgccactgct 14832697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 2476431 - 2476595
Alignment:
Q  28 tttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaag 127  Q
    |||||||| ||||||  ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  2476431 tttcctgcggattttatcaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaag 2476530  T
Q  128 gaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgctt 192  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||    
T  2476531 gaagtaacgttttgcgataaattttttgcccaggctctatataatttctggctccgccactgctt 2476595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 33006946 - 33007118
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||          
T  33006946 ttttgtgtaaattccgtaggaaacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaatt------ 33007039  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgcttgt 194  Q
                   ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||    
T  33007040 ---------------attcgcaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaattcctggctccgccactgattgt 33007118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 15504038 - 15504176
Alignment:
Q  51 tttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaatt 150  Q
    |||||| ||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15504038 tttaggatccgcgggaaagatatatccgcaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataaatt 15504137  T
Q  151 ttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||| | |||||||||| |||| || ||||||||||||    
T  15504138 ttttgtcgaggctctatataatttctggctccgccactg 15504176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 34846406 - 34846573
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||          
T  34846406 ttttgtgtaaattccgcagtaaacacatttcctacagattttgccaaggatttaggttccgcatgaaagatatatccgtaggaaatgtgaaatt------ 34846499  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
                   |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  34846500 ---------------attcgcaggaaggaagtaacgttttgcgataaattttttgtccaggctctataaaattcctggctccgccactg 34846573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 1672485 - 1672375
Alignment:
Q  79 taggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctag 178  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || |    
T  1672485 taggaaatgtgaaattatctgcagaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatttctgg 1672386  T
Q  179 ctccgccactg 189  Q
    |||||||||||    
T  1672385 ctccgccactg 1672375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 7162148 - 7161972
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| |||||||     | ||||       || |||| ||||||||||||||||||  |    
T  7162148 ttttatgtaaattccacaggaaacacatttcctgcagattttgcctaggatttc----ctgcag-------at-tccgcaggaaatgtgaaattatccac 7162061  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || ||||||||||||    
T  7162060 aggaaatgtgaaattatttgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatttctggctccgccactg 7161972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 32953732 - 32953572
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| |||||||     | ||||       || |||| |||||||||||||||||||||    
T  32953732 ttttatgtaaattccgtaggaaacacatttcctgcagattttgcctaggatttc----ctgcag-------at-tccgcaggaaatgtgaaattatctgc 32953645  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  32953644 aggaaatgtgaaattattcgtaggaaggaagtaacattttgcgataacttttttgcacaggctctataaaatt 32953572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 43228702 - 43228531
Alignment:
Q  6 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaa 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||     | ||||       || |||| |||||||||||||||||||||| |||    
T  43228702 tgtaaattccgcaggaaacacatttcctgcagattttgcctaggatttc----ctgcag-------at-tccgcaggaaatgtgaaattatctgcaagaa 43228615  T
Q  106 atgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    || |||||||||||||||||| | |||||| ||||||||| | ||||||||||||||||||||||||| || ||||||||||||    
T  43228614 atatgaaattattcgcaggaaaggagtaacattttgcgattagttttttgcccaggctctataaaatttctggctccgccactg 43228531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 13942755 - 13942641
Alignment:
Q  74 atccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    ||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  13942755 atccgcaggaaatgtgaa-ttatccacaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataatttttttacccaggctctataaaatt 13942657  T
Q  174 cctagctccgccactg 189  Q
     || ||||||||||||    
T  13942656 tctggctccgccactg 13942641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 16567904 - 16568018
Alignment:
Q  75 tccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattc 174  Q
    |||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||| |||||||||||||     
T  16567904 tccgcaggaaatgtgaaattatccgcaggaaatgtgaaattattcccaggaaggaagtaacattttgcgataatttttttgcccaagctctataaaattt 16568003  T
Q  175 ctagctccgccactg 189  Q
    ||  |||||||||||    
T  16568004 ctgactccgccactg 16568018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 12267385 - 12267271
Alignment:
Q  74 atccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    ||||| |||||||||||| ||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  12267385 atccgcaggaaatgtgaa-ttatccgcagaaaatgtgaaattattcacaggaaggaagtaacgttttgcgataaactttttgcccaggctctataaaatg 12267287  T
Q  174 cctagctccgccactg 189  Q
     || ||||||||||||    
T  12267286 tctggctccgccactg 12267271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 36234558 - 36234443
Alignment:
Q  74 atccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||  ||||||||||||    
T  36234558 atccgcaggaaatgtgaaattatctgcaagaaatgtgaaattattcgcaagaaggaagtaacattttgcgataaattttttgtccaaactctataaaatt 36234459  T
Q  174 cctagctccgccactg 189  Q
    |||  |||| ||||||    
T  36234458 cctcactccaccactg 36234443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 187
Target Start/End: Original strand, 6900856 - 6900992
Alignment:
Q  51 tttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaatt 150  Q
    |||||| ||||| || |||||||||||| | |||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  6900856 tttaggatccgcgggaaagatatatccgcaagaaatgtgaaattatccgcaggaaatgtgaaattattcgcatgaaggaagtaacattttgcgataaatt 6900955  T
Q  151 ttttgcccaggctctataaaattcctagctccgccac 187  Q
    |||| | ||  |||||| ||||| ||  |||||||||    
T  6900956 ttttactcatactctattaaatttctgtctccgccac 6900992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 21069153 - 21069248
Alignment:
Q  94 tatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| |||||||||||| || ||||| ||||||    
T  21069153 tatctgcaggaaatgtgaaattatttccaggaaggaaataacgttttgcgataaattttttgcccagactctataaaatttctggctccaccactg 21069248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 37552051 - 37552141
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||| || ||||| ||||||    
T  37552051 gcaggaaatgtgaaattattcgcaggaaggaagtaacattttgcaataatttttttgcccaggctctataaaatttctggctccaccactg 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 37654881 - 37654971
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||| || ||||| ||||||    
T  37654881 gcaggaaatgtgaaattattcgcaggaaggaagtaacattttgcaataatttttttgcccaggctctataaaatttctggctccaccactg 37654971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16667558 - 16667499
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16667558 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 16667499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15503955 - 15504014
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15503955 ttttgtgtaaattctgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 15504014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 767416 - 767490
Alignment:
Q  80 aggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaatttttt 154  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  767416 aggaaatgtgaaattatccgcagaaaatgagaaattattcgcaggaagaaagtaacgttttgcaataaatttttt 767490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 37779780 - 37779854
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    ||||||||||||||||||||||| ||||||||||||| |||| |||||| |||||||| || |||||||||||||    
T  37779780 gcaggaaatgtgaaattattcgctggaaggaagtaacattttacgataatttttttgcacaagctctataaaatt 37779854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17192734 - 17192675
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  17192734 ttttgtgtcaattccgcaggaaatacatttcctgcagattttgtcaaggatttaggttcc 17192675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21069048 - 21069107
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  21069048 ttttgtgtatattccgcaagaaacacatttcctgcagattttgccaaagatttaggttcc 21069107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 37607573 - 37607647
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    |||||||||||||||||||| || ||||||||||||| |||| |||||| |||||||| || |||||||||||||    
T  37607573 gcaggaaatgtgaaattatttgctggaaggaagtaacattttacgataatttttttgcacaagctctataaaatt 37607647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 767321 - 767380
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  767321 ttttgtataaattccgcaggaaacacatttcctacaggttttgccaaggatttagattcc 767380  T

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Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 25034985 - 25035035
Alignment:
Q  139 ttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||||||||||||||| ||||||||  |||||||||||    
T  25034985 ttgcgataaattttttgcccaggctctatgaaattcctgactccgccactg 25035035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 7159662 - 7159609
Alignment:
Q  5 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtt 58  Q
    ||||| |||||||||||||||| |||||||| |||||||||||| |||||||||    
T  7159662 gtgtacattccgcaggaaacacgtttcctgcggattttgccaagaatttaggtt 7159609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 8214612 - 8214527
Alignment:
Q  104 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||| ||||||||||||||||||| | ||||| |||| |||||| |||||| || ||||||| || ||||||| | ||||||||||    
T  8214612 aaatatgaaattattcgcaggaagtacgtaacattttacgataatttttttaccaaggctctttataattcctggttccgccactg 8214527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42989573 - 42989613
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattt 41  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  42989573 ttttgtgtaaattccgcaggaaacacatttcctgcggattt 42989613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 2985872 - 2985919
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  2985872 cgataaatttttcgcccaggctctatataattcctggctccgccactg 2985919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 4306724 - 4306673
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||| |||||||||||||  ||||||| ||||||||||||    
T  4306724 tttgcgataaatttttcgcccaggctctatgtaattcctggctccgccactg 4306673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 15497498 - 15497447
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||| |||||||||||||  ||||||| ||||||||||||    
T  15497498 tttgcgataaatttttcgcccaggctctatgtaattcctggctccgccactg 15497447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 16567847 - 16567894
Alignment:
Q  6 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    |||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  16567847 tgtaaatttcgcaggaaacacatttcctacagattttgcctaggattt 16567894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 17192651 - 17192570
Alignment:
Q  51 tttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaa 134  Q
    |||||| |||||||| ||||||||| || || |||||||||||||||||||  |||| |||||||||| ||| |||||||||||    
T  17192651 tttaggatccgcaggaaagatatattcgcagaaaatgtgaaattatctgca-aaaatatgaaattatttgca-gaaggaagtaa 17192570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36234647 - 36234588
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||| ||||||||| ||||||||| ||||||||||||||||| |||||| |||| |||||    
T  36234647 ttttatgtaaattcagcaggaaacgcatttcctgcagattttaccaagggtttaagttcc 36234588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12267474 - 12267420
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttag 55  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||| | ||||||    
T  12267474 ttttatgtaaattccgcaagaaacacatttcctgtagattttgccacgaatttag 12267420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1672551 - 1672499
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    |||| |||| ||||||||||||||| |||| |||||||||||||| |||||||    
T  1672551 ttttatgtacattccgcaggaaacatattttctgcagattttgcctaggattt 1672499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 204121 - 204172
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactgcttg 193  Q
    |||||||||||| ||||||| ||||||||||| ||  |||||||||||||||    
T  204121 cgataaatttttcgcccaggttctataaaatttctgactccgccactgcttg 204172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Complemental strand, 13942821 - 13942790
Alignment:
Q  24 cacatttcctgcagattttgccaaggatttag 55  Q
    ||||||||||||||||||||||||||||||||    
T  13942821 cacatttcctgcagattttgccaaggatttag 13942790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 15436041 - 15436091
Alignment:
Q  9 aaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||||||| ||||    
T  15436041 aaattccgcaggaaaca-atttcctgcggattttgcctaggatttagattcc 15436091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 31649118 - 31649079
Alignment:
Q  151 ttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  31649118 ttttgcccaggctctataaatttcctggctccgccactgc 31649079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 37607513 - 37607560
Alignment:
Q  6 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    ||||||||||| | |||||||||||||||||||||||| | |||||||    
T  37607513 tgtaaattccgtatgaaacacatttcctgcagattttgtctaggattt 37607560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 37779720 - 37779767
Alignment:
Q  6 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    ||||||||||| | |||||||||||||||||||||||| | |||||||    
T  37779720 tgtaaattccgtatgaaacacatttcctgcagattttgtctaggattt 37779767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 42989673 - 42989724
Alignment:
Q  137 ttttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    |||||| |||||||||||| |||| |||||||||||||||  ||||||||||    
T  42989673 ttttgcaataaattttttgtccagactctataaaattcctgactccgccact 42989724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 17331021 - 17330967
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactgctt 192  Q
    |||| ||||||||||| |||| ||||| ||||| ||||| |||||||||||||||    
T  17331021 tttgggataaatttttcgcccgggctccataaatttcctggctccgccactgctt 17330967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 36704791 - 36704749
Alignment:
Q  150 tttttgcccaggctctataaaattcctagctccgccactgctt 192  Q
    ||||||||||||||||||||| || || |||||||||||||||    
T  36704791 tttttgcccaggctctataaattttctggctccgccactgctt 36704749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 39435868 - 39435918
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactgctt 192  Q
    |||| |||||||||||| ||||| ||||| ||||| |||||||||||||||    
T  39435868 cgattaattttttgcccgggctccataaatttcctggctccgccactgctt 39435918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 39605847 - 39605801
Alignment:
Q  51 tttaggttccgcagggaagatatatccgtaggaaatgtgaaattatc 97  Q
    |||||| |||||||| |||||||||||| |||||||||| |||||||    
T  39605847 tttaggatccgcaggaaagatatatccgcaggaaatgtgcaattatc 39605801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 13695092 - 13695121
Alignment:
Q  31 cctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||||||||||||||||||||||||    
T  13695092 cctgcagattttgccaaggatttaggttcc 13695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 14317151 - 14317196
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccg 183  Q
    |||||||||||||||| | |||||||||||| ||||||| ||||||    
T  14317151 tttgcgataaatttttcgtccaggctctatataattcctggctccg 14317196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 192894 - 192942
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgcca 186  Q
    ||||||||||||||||| ||||   ||||||||||||||| ||||||||    
T  192894 tttgcgataaattttttacccaaattctataaaattcctaactccgcca 192942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 6900800 - 6900832
Alignment:
Q  28 tttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||||||||||| ||||||||||||||||    
T  6900800 tttcctgcagattttgtcaaggatttaggttcc 6900832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 38397590 - 38397550
Alignment:
Q  149 ttttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||| ||||| |||||| ||||||||||||    
T  38397590 ttttttgcccaggctttataatattcctggctccgccactg 38397550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 14727369 - 14727558
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  14727369 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatctgtaggaaatgtgaaattatctgc 14727468  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||    
T  14727469 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataatttttttgcccaggctctataaaatttctggctccgccactgc 14727558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 27584089 - 27583905
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  27584089 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccccaggaaagatatatccgtaggaaatgtgaaattatctgc 27583990  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  27583989 aggaaatgtgaaattattcgcag----gaagtaacgttttgcgataaattttttgctcaggctctataaaattcctggctccgccactg 27583905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 37154066 - 37153881
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  37154066 ttttgtgtaaattccgcaggaaatgtatttcctgcagattttgccaaggatttaggttccacaggaaagatatatccgtaggaaatgtgaatttatctgc 37153967  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgcca 186  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37153966 aggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctggctccgcca 37153881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 25007503 - 25007691
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||    
T  25007503 ttttgtgtaaattccgcaagaaatgtatttcctgcagattttgccaaggatttaggttctgcaggaaagatatatccgtaggaaatgtgaatttatctgc 25007602  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25007603 aggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctggctccgccactg 25007691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 44305451 - 44305639
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  44305451 ttttgtgtaaattccgcaggaaatgtatttcctgcagattttgccaaggatttaggttccacaggaaagatatatccgtaggaaatgtgaatttatctgc 44305550  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  44305551 aggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataatttttttgcccaggctctataaaattcctggctccgccactg 44305639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 25011612 - 25011426
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  25011612 ttttgtgtaaattccgcaggaaacacattttctgcagattttgccaaggatttaggttccgcaga-aagatatatccgtaggaaatgtgaaattatctgc 25011514  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    || |||||  |||||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||||||| || || ||||||||    
T  25011513 agaaaatgcaaaattattcgcatgaaggaagtaacgttttgcgataatttttttgcccagattctataaaatttctggcgccgccact 25011426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 1428468 - 1428307
Alignment:
Q  28 tttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaag 127  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||    
T  1428468 tttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcagaaaatgtgaaattattcgtaggaag 1428369  T
Q  128 gaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||    
T  1428368 gaagtaacgttttgcggtaaattttttgcccaggctctataaaattcctggctccgctactg 1428307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 27460735 - 27460906
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||    
T  27460735 ttttgtgtaaattccgaaggaaacacatttcctgcagattttgccaaggatttaggttccg-----------------taggaaatgtgaaattatctgc 27460817  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||||||    
T  27460818 aggaaatgtgaaattattcgcaggaaggaagtaatgttttgcgataaatttttt-cccaggctctataaaattcttggctccgccactgc 27460906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 31844696 - 31844529
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||          
T  31844696 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaatt------ 31844603  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
                   |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  31844602 ---------------attcgcaggaaggaagtaacattttgcgataaattttttgcccagactctataaaattcctggctccgccactg 31844529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 51 - 176
Target Start/End: Complemental strand, 4642063 - 4641938
Alignment:
Q  51 tttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaatt 150  Q
    |||||| |||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  4642063 tttaggatccgcaggaaagatatatccgcaggaaatatgaaattatccgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgattgatt 4641964  T
Q  151 ttttgcccaggctctataaaattcct 176  Q
    |||||| | |||||||||||||||||    
T  4641963 ttttgcacgggctctataaaattcct 4641938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 6331725 - 6331892
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||                      
T  6331725 ttttgtgtaaattccgcaggaaacacatttcctacagattttgccaaggatttaggttccgcaggaaagatatatccgtagg------------------ 6331806  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
       ||||||||||||||| | ||||||||||||||||||||||||||||||||||| || |||||||||||||||| | ||||||||||    
T  6331807 ---aaatgtgaaattatttgaaggaaggaagtaacgttttgcgataaattttttgctcatgctctataaaattcctggttccgccactg 6331892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 33468954 - 33468860
Alignment:
Q  94 tatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33468954 tatctgtaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctggctccgccact 33468860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 8239330 - 8239502
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacat--ttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatct 98  Q
    ||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||                    
T  8239330 ttttgtgtaaattccgcaggaaatatatatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtagg---------------- 8239413  T
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgctt 192  Q
         ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  8239414 -----aaatgtgaaattattcataggaaggaagtaacgttttgcgataaattttttgcctaggttctataaaattcctggctccgccactgctt 8239502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 75 - 190
Target Start/End: Original strand, 4774085 - 4774200
Alignment:
Q  75 tccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattc 174  Q
    |||| |||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||     
T  4774085 tccgcaggaaatgtgaaattatccgcaagaaatgtgaaattattcgcaggaagaaagtaacattttgcgataatttttttgcccagactctataaaattt 4774184  T
Q  175 ctagctccgccactgc 190  Q
    || |||||||||||||    
T  4774185 ctggctccgccactgc 4774200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 24646092 - 24646275
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||  || ||   || | |||  | || |    || ||    
T  24646092 ttttgtgtacattccgtaggaaacacatttcctgcagattttgccaaggatttaggttcc-caggtgaggtaatacctttggatttttgga----tccgc 24646186  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||| |||||||||||||| |||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  24646187 aggaaatttgaaattattcgcatgaaggaagtaacattttgagataatttttttgcccaggctctataaaattcctggctccgcaactg 24646275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 34459253 - 34459350
Alignment:
Q  94 tatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgct 191  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  34459253 tatctgtaggaaatgtgaaattattcgtgggaaggaagtaacgttttgtgataaattttttgcccagactctataaaattcctggctccgtcactgct 34459350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 190
Target Start/End: Original strand, 9527196 - 9527285
Alignment:
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||||||| || |||| ||||||||    
T  9527196 aggaaatgtgaaattattcgcaggaagacagtaacgttttgcgataaattttttgcccatactctataaaatttctggctctgccactgc 9527285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 183
Target Start/End: Original strand, 49898526 - 49898609
Alignment:
Q  100 caggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccg 183  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| |||| || ||||||    
T  49898526 caggaaatgtgaaattattcgcaggaaggacgtaacattttgcgataaattttttgcccagactctatataatttctggctccg 49898609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 24745451 - 24745629
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||     | || |  ||| || |||||  |  | |    || ||    
T  24745451 ttttgtgtaaattctgcaggaaacacattttctgcagattttgccaaggatttaggttttaaggtgaggtaataccc-taggattttagga----tccgc 24745545  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgcca 186  Q
    |||||||||||||||||||||| |||| ||||||| ||  ||||||| |||||||||||| ||||||||||||||| |||||||||    
T  24745546 aggaaatgtgaaattattcgcatgaagaaagtaacatt--gcgataatttttttgcccagactctataaaattcctggctccgcca 24745629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 6802067 - 6801972
Alignment:
Q  94 tatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||| |||||| |||| | ||||| |||||||||||||||||||||||| |||  |||||||||||| || |||| |||||||    
T  6802067 tatctgcaggaaatgtgcaattatccgcatgtaggaaataacgttttgcgataaattttttgtccaaactctataaaatttcttgctctgccactg 6801972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 44238934 - 44238749
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc-----------------gcagggaagatatatccgtagga 83  Q
    |||| ||||||||| |||||||||||||||| || |||||||||||||||||||||||||                 ||| | |||||||||||| | ||    
T  44238934 ttttttgtaaattctgcaggaaacacatttcttgtagattttgccaaggatttaggttcctagaggtagtaggatctgcaagaaagatatatccgcatga 44238835  T
Q  84 aatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    |||||||||||||| ||||||||||||||| |||||||    | |||||||| |||| |||||||| |||| | ||| ||||||||||||    
T  44238834 aatgtgaaattatccgcaggaaatgtgaaaatattcgc----atgaagtaacattttacgataaatattttacacagactctataaaatt 44238749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 33469009 - 33468951
Alignment:
Q  18 aggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatc 76  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  33469009 aggaaacacatttcctgcaaattttgtcaaggatttaggttccgcaggaaagatatatc 33468951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 48940492 - 48940438
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttag 55  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  48940492 ttttgtgtaaattccgcaggaaacacatttcatgcagattttgtcaaggatttag 48940438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 9527088 - 9527143
Alignment:
Q  5 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||| | |||||||||||| |||||||||||||||||||||||||||||||    
T  9527088 gtgtaaatttcacaggaaacacatctcctgcagattttgccaaggatttaggttcc 9527143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 48940402 - 48940328
Alignment:
Q  80 aggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaatttttt 154  Q
    ||||||||||||||||||||||  |||||||||||||||||||| || ||| ||| ||||||| |||| ||||||    
T  48940402 aggaaatgtgaaattatctgcaaaaaatgtgaaattattcgcagtaaagaaataaagttttgcaataattttttt 48940328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 34459150 - 34459206
Alignment:
Q  3 ttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttc 59  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  34459150 ttgtggaatttccgtaggaaacacatttcctgcagattttgccaaggatttaagttc 34459206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 4774051 - 4774085
Alignment:
Q  6 tgtaaattccgcaggaaacacatttcctgcagatt 40  Q
    |||||||||||||||||||||||||||||||||||    
T  4774051 tgtaaattccgcaggaaacacatttcctgcagatt 4774085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6802176 - 6802113
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgca----gattttgccaaggatttaggttcc 60  Q
    |||| |||||||||| |||||||||||||||||||     ||||||||||||||||||||||||    
T  6802176 ttttctgtaaattccacaggaaacacatttcctgcctgcggattttgccaaggatttaggttcc 6802113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4642146 - 4642089
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtt 58  Q
    |||| |||||||| | ||||||| ||||||| ||||||||||| ||||||||||||||    
T  4642146 ttttatgtaaatttcacaggaaatacatttcttgcagattttgtcaaggatttaggtt 4642089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 173
Target Start/End: Original strand, 17875579 - 17875614
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaatt 173  Q
    ||||||||||||||||||||||| ||||||||||||    
T  17875579 tttgcgataaattttttgcccagactctataaaatt 17875614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 37575150 - 37575193
Alignment:
Q  150 tttttgcccaggctctataaaattcctagctccgccactgcttg 193  Q
    |||||| ||| |||||||||||||||||||||| ||||||||||    
T  37575150 tttttgtccaagctctataaaattcctagctccaccactgcttg 37575193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 42817784 - 42817823
Alignment:
Q  150 tttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  42817784 tttttgcccagactctataaaattcctggctccgccactg 42817823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 188
Target Start/End: Original strand, 11647352 - 11647390
Alignment:
Q  150 tttttgcccaggctctataaaattcctagctccgccact 188  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  11647352 tttttgcccaggctctataaaattcctggctccaccact 11647390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 117
Target Start/End: Complemental strand, 48940416 - 48940386
Alignment:
Q  87 gtgaaattatctgcaggaaatgtgaaattat 117  Q
    |||||||||||||||||||||||||||||||    
T  48940416 gtgaaattatctgcaggaaatgtgaaattat 48940386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 3830102 - 3830151
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccac 187  Q
    |||||||||||||||||||||  |||| ||||| ||||| ||||||||||    
T  3830102 tttgcgataaattttttgcccgagctccataaatttcctggctccgccac 3830151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 34459231 - 34459276
Alignment:
Q  51 tttaggttccgcagggaagatatatccgtaggaaatgtgaaattat 96  Q
    |||||| |||||| | |||||||||| |||||||||||||||||||    
T  34459231 tttaggatccgcaagaaagatatatctgtaggaaatgtgaaattat 34459276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 49898442 - 49898471
Alignment:
Q  28 tttcctgcagattttgccaaggatttaggt 57  Q
    ||||||||||||||||||||||||||||||    
T  49898442 tttcctgcagattttgccaaggatttaggt 49898471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 26159376 - 26159424
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    |||| ||||||| |||||||||| ||||| ||||| |||||||||||||    
T  26159376 cgattaatttttcgcccaggctccataaatttcctggctccgccactgc 26159424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 33169370 - 33169338
Alignment:
Q  28 tttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||| ||||||||||||||||||||||||    
T  33169370 tttcctgcggattttgccaaggatttaggttcc 33169338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 9e-91; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 4728598 - 4728786
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  4728598 ttttgagtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatctgtaggaaatgtgaaattatctgc 4728697  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4728698 agaaaatgtgaaattatttgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 4728786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 10715695 - 10715883
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcc-tgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctg 99  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10715695 ttttgtgtaaattccgcaggaaacacattgccctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctg 10715794  T
Q  100 caggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  10715795 caggaaatgtgaaattattcgcaggaaggaagtaatgttttgcgataaattttttgcccaggctctataaaatacctggctccgccact 10715883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 10929465 - 10929653
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcc-tgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctg 99  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10929465 ttttgtgtaaattccgcaggaaacacattgccctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctg 10929564  T
Q  100 caggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  10929565 caggaaatgtgaaattattcgcaggaaggaagtaatgttttgcgataaattttttgcccaggctctataaaatacctggctccgccact 10929653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 4552228 - 4552415
Alignment:
Q  4 tgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcagg 103  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  4552228 tgtgtaaattccgcaggaaatgtatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcagg 4552327  T
Q  104 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgct 191  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  4552328 aaatgtgaaattatttgtaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaattcctggctccgccactgct 4552415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 2017513 - 2017315
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||||||||   |||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||     
T  2017513 ttttgtgtaaattccgcaggaaatgtatttcccgcagattttgccaagtatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgt 2017414  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgcttgtccccg 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  2017413 aggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgcccaggctttataaaattcctggctccgccactgattgtgcccg 2017315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 40969264 - 40969452
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||| ||||||||||||||| |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40969264 ttttgtgtaaattctgcaggaaacacattttctgcagattttgtcaatgatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgc 40969363  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    || |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||| |||||    
T  40969364 agaaaatatgaaattattcgcagaaaggaagtaacgttttgcgataaattttttgcccaagctctataaaattgctggctccgtcactg 40969452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 46645643 - 46645831
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||| ||||||||||||||| |||| ||||||||| | |    
T  46645643 ttttgtgtaaattctgcaggaaacacatttcatgcagattttgccaagagtttaggttccgcaggaaagatatatccgtagaaaatatgaaattatatac 46645742  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  46645743 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaatttttttcccagactctataaaattcctggctccgccactg 46645831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 2576211 - 2576403
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagatttt-gccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctg 99  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||| ||||||||||    
T  2576211 ttttgtataaattccgcaggaaacacatttcctgcagatttttgccaaggatgtaggttccgcaggaaatatatatccgtaggaaatgtaaaattatctg 2576310  T
Q  100 caggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgctt 192  Q
    ||| |||| |||||||| |||||| ||||||||||||||||||||||| |||||||||||| || |||||||||| | |||||||||||||||    
T  2576311 cagaaaatatgaaattaatcgcagaaaggaagtaacgttttgcgataatttttttgcccagactttataaaattcttggctccgccactgctt 2576403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 10058577 - 10058743
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||          
T  10058577 ttttgtgtaaattccgcaggaaacacatttccagcagattttaccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaatt------ 10058670  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10058671 ---------------attcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctggctccgccact 10058743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 56 - 189
Target Start/End: Original strand, 32005978 - 32006111
Alignment:
Q  56 gttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttg 155  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32005978 gttccgcaggaaagatatatccgtaggaaatgtgaatttatttgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttg 32006077  T
Q  156 cccaggctctataaaattcctagctccgccactg 189  Q
    ||||| ||||||||||||| |  |||||||||||    
T  32006078 cccagactctataaaattcatgactccgccactg 32006111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 31364175 - 31364339
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||          
T  31364175 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagaaaagatatatccgtaggaaatgtgaaatt------ 31364268  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgcca 186  Q
                   |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||    
T  31364269 ---------------attcgcaggaaggaagtaacgttttgcgataaattttttgcccatgctctataaaatttctggctccgcca 31364339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 52373875 - 52373982
Alignment:
Q  82 gaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctc 181  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  52373875 gaaatgtgaaattatccgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcacagactctataaaattcctggctc 52373974  T
Q  182 cgccactg 189  Q
    ||||||||    
T  52373975 cgccactg 52373982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 51 - 183
Target Start/End: Complemental strand, 2521924 - 2521792
Alignment:
Q  51 tttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaatt 150  Q
    |||||| |||||||| |||| ||||||| || |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2521924 tttaggatccgcaggaaagacatatccgcagaaaatgtgatattatccgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttacgataaatt 2521825  T
Q  151 ttttgcccaggctctataaaattcctagctccg 183  Q
    ||||||||| | |||||||||||||| ||||||    
T  2521824 ttttgcccatgttctataaaattcctggctccg 2521792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 43003188 - 43003075
Alignment:
Q  73 tatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaat 172  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||| |||| |||||||||||    
T  43003188 tatcggtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaagaagtaacgttctgcaataaattttttgtccagactctataaaat 43003089  T
Q  173 tcctagctccgcca 186  Q
    | || |||||||||    
T  43003088 ttctggctccgcca 43003075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 9003607 - 9003784
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||     | ||||       || |||| ||||||||||||||||||       
T  9003607 ttttatgtaaattccgcaggaaacacatttcctgcagattttgcctaggatttc----ctgcag-------at-tccgcaggaaatgtgaaattatccat 9003694  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||  ||||||||||||    
T  9003695 aggaaatgtgaaattattcgcaagaaggaagtaacattttgcgataatttttttgtccaggctctataaaatttctgactccgccactgc 9003784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 41972513 - 41972330
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagata-tatccgtaggaaatgtgaaattatctg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  || || ||||   ||   || | |    ||| |    
T  41972513 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattaaggttcc-caggtgaggtaatatcttaag---attttagg--atccg 41972420  T
Q  100 caggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  | |||||||||||| ||||||| ||||    
T  41972419 cagaaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgaccagattttataaaattcctggctccgctactg 41972330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 94 - 190
Target Start/End: Original strand, 25237721 - 25237817
Alignment:
Q  94 tatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||   |||||||| |||||||| |||||||||||||||||||||    
T  25237721 tatccgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgtgataaaaaatttgcccatgctctatataattcctagctccgccactgc 25237817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 190
Target Start/End: Original strand, 50383987 - 50384102
Alignment:
Q  74 atccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    |||||||||||||||||||| ||| ||||||| | | |||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  50383987 atccgtaggaaatgtgaaataatccgcaggaattataaaattattcgcaggaaggaagtaacgttttgcaat-ttttttttgcccaggctctataaaatt 50384085  T
Q  174 cctagctccgccactgc 190  Q
    | | |||||||||||||    
T  50384086 cttggctccgccactgc 50384102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 50099989 - 50100068
Alignment:
Q  80 aggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgccca 159  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  50099989 aggaaatgtgaaattatccgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttaccca 50100068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 11827024 - 11826931
Alignment:
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgcttgt 194  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||| || ||| |||||||| ||||    
T  11827024 aggaaatgtgaaattattcgcaggaaggaagtaacattttacgataatttttttgcctaggctctataaaatttctggcttcgccactgtttgt 11826931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 1585777 - 1585864
Alignment:
Q  69 gatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgc 156  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||| | |||| ||| ||||||||||||||| ||||||||    
T  1585777 gatatatccgtaggaaatgtaaatttatctgcaggaaatgtgaaattattcgtacgaagaaagcaacgttttgcgataatttttttgc 1585864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25237616 - 25237675
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25237616 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 25237675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 14044462 - 14044552
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||||  |||||||||||| || ||||||||||||    
T  14044462 gcaggaaatgtgaaattattctcaggaaggaggtaacattttgcgataatttttttgcccatactctataaaatttctggctccgccactg 14044552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 49745079 - 49745263
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc----gcagggaa--------gatat----atccgtaggaa 84  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||      ||| ||        ||| |    ||||| |||||    
T  49745079 ttttgtgtaaattccgtaggaaacacattttctgcagattttgccaaggatttaggttcctaggtgaggtaataccttaggattttaggatccgcaggaa 49745178  T
Q  85 atgtgaaattatctgcag-gaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctata 168  Q
    ||||||||||||| ||||  |||||| ||||||||||||||||||| ||||| |||| ||||||||||||| ||||| |||||||    
T  49745179 atgtgaaattatccgcagaaaaatgtaaaattattcgcaggaaggacgtaacattttacgataaattttttccccagactctata 49745263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 186
Target Start/End: Original strand, 32828281 - 32828368
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgcca 186  Q
    ||||||||||| |||||||| |||||||||||||||  ||||| ||||| |||||||||||||| |||||||||| || |||||||||    
T  32828281 gcaggaaatgtaaaattatttgcaggaaggaagtaatattttgtgataatttttttgcccaggccctataaaatttctggctccgcca 32828368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8901843 - 8901897
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttag 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8901843 ttttgtgtaaactccgcaggaaacacatttcctgcagattttgccaaggatttag 8901897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 9694204 - 9694291
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    ||||||||||| |||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||| |||||| || |||||||||||    
T  9694204 gcaggaaatgtcaaattattcgcaagaaggaaataacattttgcgat-aattttttgcccaggctcta-aaaatttctggctccgccact 9694291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9694139 - 9694191
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  9694139 ttttatgtaaattccgcaggaaacacatttcctgcagattttgcctaggattt 9694191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14044397 - 14044449
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  14044397 ttttatgtaaattccgcaggaaacacatttcctgcagattttgcctaggattt 14044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2522007 - 2521948
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||||| |||||||||||||||||||||| |||||||  ||||||||||||||||    
T  2522007 ttttgtgtaaagtccgcaggaaacacatttcctgtagattttatcaaggatttaggttcc 2521948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 31929102 - 31929048
Alignment:
Q  6 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||    
T  31929102 tgtaaattctgcaagaaacacatttcctgcaaattttgccaaggatttaggttcc 31929048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36947558 - 36947617
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||| ||||||| |||||||||| ||||||||| |||||||||||| |||||||||||    
T  36947558 ttttgtataaattctgcaggaaacatatttcctgcggattttgccaagaatttaggttcc 36947617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 50383929 - 50383978
Alignment:
Q  2 tttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggat 51  Q
    |||| |||||||  ||||||||||||||||||||||||||||||||||||    
T  50383929 tttgcgtaaattttgcaggaaacacatttcctgcagattttgccaaggat 50383978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 5516984 - 5516928
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactgcttgt 194  Q
    |||||||||||||||| |||||||||||||  | ||||| |||||||||||||||||    
T  5516984 tttgcgataaatttttcgcccaggctctatgtagttcctggctccgccactgcttgt 5516928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 50099880 - 50099939
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||||||||||| ||||||  ||||| ||||| ||||||| |||||||||||||||    
T  50099880 ttttgtgtaaattccgtaggaaattcattttctgcaaattttgctaaggatttaggttcc 50099939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 52373778 - 52373837
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||||||||||||| ||||  ||||| ||||||||||| || |||||||||||||    
T  52373778 ttttgtgtaaattccgcagaaaacgtatttcttgcagattttgtcagggatttaggttcc 52373837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 24974570 - 24974528
Alignment:
Q  151 ttttgcccaggctctataaaattcctagctccgccactgcttg 193  Q
    |||||||||||||||||||| ||||| ||||||||||||||||    
T  24974570 ttttgcccaggctctataaatttcctggctccgccactgcttg 24974528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 36947650 - 36947720
Alignment:
Q  119 cgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||| ||  |||||||||||| ||||||| ||| ||| ||||||||||||| || ||||||||    
T  36947650 cgcaggaaggaaatattgttttgcgataatttttttgtccaagctttataaaattcctaactgcgccactg 36947720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 42843980 - 42844026
Alignment:
Q  141 gcgataaattttttgcccaggctctataaaattcctagctccgccac 187  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||||||    
T  42843980 gcgataaatttttcgcccaggctctatagaattcctggctccgccac 42844026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 43357064 - 43357116
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactgcttgt 194  Q
    |||| ||||||| |||||||||| ||||| ||||| |||||||||||||||||    
T  43357064 cgattaatttttcgcccaggctccataaatttcctggctccgccactgcttgt 43357116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 12211136 - 12211085
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||||||||  |||| |||||||| | ||||||||||||    
T  12211136 tttgcgataaattttttgcccaaactctgtaaaattcatggctccgccactg 12211085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 25182785 - 25182742
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctc 181  Q
    |||||||||| ||||||||| |||||||||||||||||| ||||    
T  25182785 tttgcgataatttttttgcctaggctctataaaattcctggctc 25182742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 26438287 - 26438240
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||| |||||||||||||||||| ||||| ||||| ||||||||||||    
T  26438287 cgattaattttttgcccaggctccataaatttcctggctccgccactg 26438240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 37236168 - 37236117
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||| |||||||||||||  |||| || ||||||||||||    
T  37236168 tttgcgataaatttttcgcccaggctctatgtaatttctggctccgccactg 37236117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 41955269 - 41955324
Alignment:
Q  5 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||||| ||||||||||  |||||| | ||||| ||||||||||||||||||    
T  41955269 gtgtaaattcagcaggaaacatgtttcctacggatttcgccaaggatttaggttcc 41955324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 49908267 - 49908216
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||| |||||||||||||  ||||||| | ||||||||||    
T  49908267 tttgcgataaatttttcgcccaggctctatgtaattcctggttccgccactg 49908216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 48131134 - 48131184
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    |||||||||| |||||||||||| ||| ||||| ||||| |||||||||||    
T  48131134 tttgcgataatttttttgcccagactccataaatttcctggctccgccact 48131184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 10351920 - 10351871
Alignment:
Q  139 ttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    ||||||||||||||| |||| ||||| ||||| ||||| |||||||||||    
T  10351920 ttgcgataaatttttcgcccgggctccataaatttcctggctccgccact 10351871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 6689262 - 6689214
Alignment:
Q  143 gataaattttttgcccaggctctataaaattcctagctccgccactgct 191  Q
    ||||||||||| |||| ||||| ||||| ||||| ||||||||||||||    
T  6689262 gataaatttttcgcccgggctccataaatttcctggctccgccactgct 6689214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 20130398 - 20130446
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    |||| ||||||| |||||||||| ||||| ||||| |||||||||||||    
T  20130398 cgattaatttttcgcccaggctccataaatttcctggctccgccactgc 20130446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 26449845 - 26449889
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctcc 182  Q
    |||||||||||||||||||||  |||| ||||| |||||||||||    
T  26449845 tttgcgataaattttttgcccgagctccataaatttcctagctcc 26449889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 42739901 - 42739869
Alignment:
Q  28 tttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||||||| |||||||||||||||||||    
T  42739901 tttcctgcagattatgccaaggatttaggttcc 42739869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 43003208 - 43003156
Alignment:
Q  74 atccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaa 126  Q
    ||||| ||||||||| |||||||| | |||||||||||||||||  |||||||    
T  43003208 atccgcaggaaatgttaaattatcggtaggaaatgtgaaattatctgcaggaa 43003156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 55464566 - 55464518
Alignment:
Q  140 tgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    ||||||||||| ||||| |||||| |||||||||| | |||||||||||    
T  55464566 tgcgataaattgtttgctcaggctatataaaattcatggctccgccact 55464518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 2 - 188
Target Start/End: Complemental strand, 36406564 - 36406378
Alignment:
Q  2 tttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgca 101  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  36406564 tttgtgtaaattccgtaggaaacacatttcctgcagattttgccaaggattgaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgca 36406465  T
Q  102 ggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36406464 agaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctggctccgccact 36406378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 28928098 - 28928287
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcc-tgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctg 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  28928098 ttttgtgtaaattccgcaggaaacacatttccctgcagattttgccaaggatttaggttccgcaggaaagatatatctgtaggaaatgtgaaattatctg 28928197  T
Q  100 caggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||| |||| |||||||||| ||||||||||||    
T  28928198 cagaaaatgtgaaattattcgcaggaaggaagtaactttttacgataaattttttacccagactctttaaaattcctggctccgccactg 28928287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 3384095 - 3383907
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||| |||  |||   ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  3384095 ttttgtgtaaattctgcaaaaaatgtatttcatgtagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgc 3383996  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| || | ||||||||||| || ||||||||||||    
T  3383995 aggaaacgtgaaattattcgtaggaaggaagtaacgttttgcgataaaatttttgctcatgttctataaaatttctggctccgccactg 3383907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 24965072 - 24965239
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||  | ||||||||||||||           
T  24965072 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgcctaggatttaggttccgcaggaaagatatatttgcaggaaatgtgaaat------- 24965164  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
                  ||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  24965165 --------------tattcgcagaaagaaagtaaggttttgcgataaattttttgcccaggctctataaaattcctggctctgccactg 24965239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 34282864 - 34282764
Alignment:
Q  73 tatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaat 172  Q
    |||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  34282864 tatccgcatgaaatgtgaaattatttgcaggaaatgtgaaattattcgcaggaaggaagtaacgttgtgcgataaattttttgtccaggctctataaaat 34282765  T
Q  173 t 173  Q
    |    
T  34282764 t 34282764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 186
Target Start/End: Complemental strand, 35384355 - 35384256
Alignment:
Q  87 gtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgcca 186  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  35384355 gtgaaattatctggaggaaatgtgaaattattcgtaggaaggaagtaccgttttgcgataaattttttgcccaagctctataaaattcctggctccgcca 35384256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 27321859 - 27321753
Alignment:
Q  80 aggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagc 179  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || ||    
T  27321859 aggatatgtgaaattatctgcagaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatttctggc 27321760  T
Q  180 tccgcca 186  Q
    || ||||    
T  27321759 tctgcca 27321753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 99 - 190
Target Start/End: Original strand, 38214863 - 38214954
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||||||||||| || |||||||||||||    
T  38214863 gcaggaaatgtgaaattattcgcaggaatgaagtaacattttgcgataatttttttgcccaagctctataaaatttctggctccgccactgc 38214954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 177
Target Start/End: Original strand, 13243242 - 13243346
Alignment:
Q  73 tatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaat 172  Q
    |||||| ||||||||||||||||||| ||  ||||||||||||||| ||| |||  |||||||||||| ||||||||||||||| |||||||||||||||    
T  13243242 tatccgcaggaaatgtgaaattatctccacaaaatgtgaaattattggcaagaaaaaagtaacgttttacgataaattttttgctcaggctctataaaat 13243341  T
Q  173 tccta 177  Q
    |||||    
T  13243342 tccta 13243346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13243133 - 13243192
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13243133 ttttgtgtaaattccgcaggaaacacatttcctgtagattttgccaaggatttaggttcc 13243192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 34282969 - 34282913
Alignment:
Q  5 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccg 61  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  34282969 gtgtaaattctgcaggaaacacatttcctgcagattttgccaaggatttaagttccg 34282913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39431738 - 39431679
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  39431738 ttttgtgtaaattccgtaggaaacacatttcgtgcagattttgccaaagatttaggttcc 39431679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 21958779 - 21958830
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  21958779 tttgcgataaactttttgcccaagctctataaaattcctagctccgccactg 21958830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 36409652 - 36409704
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  36409652 tttgcgataaatttttcgcccgggctctataaatttcctagctccgccactgc 36409704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27321926 - 27321882
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgcc 45  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||    
T  27321926 ttttatgtaaattccgcaggaaacacatttcctgcaaattttgcc 27321882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 31500902 - 31500854
Alignment:
Q  6 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattta 54  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  31500902 tgtaaattctgcaggaaacacatttcctacggattttgccaaggattta 31500854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 34282884 - 34282832
Alignment:
Q  74 atccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaa 126  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||| |||||||    
T  34282884 atccgcaggaaatgtgaaattatccgcatgaaatgtgaaattatttgcaggaa 34282832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 39431639 - 39431591
Alignment:
Q  67 aagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaatt 115  Q
    |||||||||||| | ||||||||||||||||| ||||||||||||||||    
T  39431639 aagatatatccgcatgaaatgtgaaattatctacaggaaatgtgaaatt 39431591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 8968569 - 8968608
Alignment:
Q  150 tttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  8968569 tttttgcctaggctctataaaattcctagctccgccactg 8968608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 17839594 - 17839645
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||| |||||||||||||  ||||||| ||||||||||||    
T  17839594 tttgcgataaatttttcgcccaggctctatgtaattcctggctccgccactg 17839645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 21138130 - 21138075
Alignment:
Q  5 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||| |||| ||||||| ||||||||  |||||||||||||||||||||||    
T  21138130 gtgtaaatttcgcatgaaacacgtttcctgcgaattttgccaaggatttaggttcc 21138075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 27046968 - 27047020
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    ||||||||||||||||||||| ||||| ||| | ||||| |||||||||||||    
T  27046968 tttgcgataaattttttgcccgggctccatatatttcctggctccgccactgc 27047020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 5637618 - 5637567
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||| ||||| |||||||  ||||||| ||||||||||||    
T  5637618 tttgcgataaatttttcgcccaagctctatgtaattcctggctccgccactg 5637567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 13152304 - 13152253
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||| ||  |||||||||| ||| ||||||||||||||||||||||||    
T  13152304 tttgcgatcaaaattttgcccagactcgataaaattcctagctccgccactg 13152253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 13243222 - 13243265
Alignment:
Q  74 atccgtaggaaatgtgaaattatctgcaggaaatgtgaaattat 117  Q
    ||||| | |||||||||||||||| |||||||||||||||||||    
T  13243222 atccgcaagaaatgtgaaattatccgcaggaaatgtgaaattat 13243265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 16594824 - 16594862
Alignment:
Q  151 ttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  16594824 ttttgcccaggctctataaatttcctggctccgccactg 16594862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 24592234 - 24592196
Alignment:
Q  151 ttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  24592234 ttttgctcaggctctataaaattcctggctccgccactg 24592196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 29632544 - 29632594
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactgctt 192  Q
    |||| ||||||| |||||||||| ||||| ||||| |||||||||||||||    
T  29632544 cgattaatttttcgcccaggctccataaatttcctggctccgccactgctt 29632594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 39915670 - 39915720
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactgctt 192  Q
    |||| ||||||| |||||||||| ||||| ||||| |||||||||||||||    
T  39915670 cgattaatttttcgcccaggctccataaatttcctggctccgccactgctt 39915720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 24674667 - 24674618
Alignment:
Q  11 attccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||| ||||||  ||||||||| |||||||||||||||| |||||||    
T  24674667 attccgctggaaaccgatttcctgcggattttgccaaggattgaggttcc 24674618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 31500789 - 31500736
Alignment:
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaatttttt 154  Q
    ||||||||| |||||||||| | |||||||||||  |||||| |||||||||||    
T  31500789 aggaaatgtaaaattattcgtatgaaggaagtaatattttgcaataaatttttt 31500736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 10014360 - 10014312
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgcca 186  Q
    |||||||||||||||| |||||||||||||| |||| || ||| |||||    
T  10014360 tttgcgataaatttttcgcccaggctctatataatttctggcttcgcca 10014312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 30791399 - 30791347
Alignment:
Q  139 ttgcgataaattttttgcccaggctctataaaattcctagctccgccactgct 191  Q
    |||||||||||||||||||||  |||||| |||||||| |||  |||||||||    
T  30791399 ttgcgataaattttttgcccaaactctatgaaattcctggctttgccactgct 30791347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38214798 - 38214850
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    |||| ||||||||| |||  ||||||||||||||||||||||| | |||||||    
T  38214798 ttttatgtaaattctgcataaaacacatttcctgcagattttgtctaggattt 38214850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 165; Significance: 2e-88; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 6799961 - 6799773
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6799961 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgc 6799862  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||    
T  6799861 aggaaatgtgaaattattcgcaggaaggaactaacgttttgtgataaaaaatttgcccaggctctataaaattcctagctccgccactg 6799773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 5 - 189
Target Start/End: Complemental strand, 41114941 - 41114757
Alignment:
Q  5 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcagga 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  41114941 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgcagga 41114842  T
Q  105 aatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||    
T  41114841 aatgtgaaattattcgcatgaaggaagtaacgttttgcgataaattttttgcccaagctctataaaattcctggctcctccactg 41114757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 29257406 - 29257594
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  29257406 ttttgtgtaaatttcgcaggaaacacatttcctgcagattttgccaagaatttacgttccgcaggaaagatatatccgtaggaaatgtgaacttatctgc 29257505  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  29257506 aggaaatgtgaaattattcgcagaaaggaagtaacgttttgcgataaattttttgcccagactctataaaattcctggctccgccactg 29257594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 13203807 - 13203996
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  13203807 ttttgtgtaaattccgcaggaaacacgtttcctgcagattttgccaaggatttaggttccgcaggaaagagatatccgtaggaaatgtgaaattatctgc 13203906  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
     | |||||||||||||||||| ||||||||||||| |||||||||||||||||||| || |||||||||||||||| |||||||||||||    
T  13203907 ggaaaatgtgaaattattcgctggaaggaagtaacattttgcgataaattttttgctcatgctctataaaattcctggctccgccactgc 13203996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 18299218 - 18299060
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||    
T  18299218 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcaagaaagatatatctgtaggaaatgtgaaattatctgc 18299119  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgccca 159  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18299118 aggaaatgtgaaattattcgcaggaaggaagtaacgttttacgataaattttttgccca 18299060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 17148821 - 17149024
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgc----agggaa--------gatat----atccgtaggaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||      ||||||        ||| |    ||||| |||||    
T  17148821 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgc-aaggatttaggttcccaggtgagggaataccataggattttaggatccgcaggaa 17148919  T
Q  85 atgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgc 184  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||| ||||||||||    
T  17148920 atgtggaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgagataaattttttgcccaagctcaataaaatttctagctccgc 17149019  T
Q  185 cactg 189  Q
    |||||    
T  17149020 cactg 17149024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 41010624 - 41010740
Alignment:
Q  73 tatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaat 172  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  41010624 tatccgtaggaaatgtgaaattttctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgtccacactctataaaat 41010723  T
Q  173 tcctagctccgccactg 189  Q
    ||||||||||| |||||    
T  41010724 tcctagctccgtcactg 41010740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 304117 - 303979
Alignment:
Q  51 tttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaatt 150  Q
    |||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||| ||    
T  304117 tttaggatccgcaggaaagatatatccgcaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcagataagaagtaacgttttgcgataattt 304018  T
Q  151 ttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||  |||||||||||| || ||||||||||||    
T  304017 ttttgcccaaactctataaaatttctggctccgccactg 303979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 22572776 - 22572608
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | ||||||||||||||||          
T  22572776 ttttgtgtaaattccccaggaaacacatttcctgcagattttgccaaggatttaggttccgcaagaaagatatattcataggaaatgtgaaatt------ 22572683  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
                   |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  22572682 ---------------attcgcaggaagaaagtaacgttttgcgataaattttttgtccaggctttataaaattcctggctccgccactgc 22572608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 12000646 - 12000785
Alignment:
Q  51 tttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaa-tgtgaaattattcgcaggaaggaagtaacgttttgcgataaat 149  Q
    |||||| |||||||| |||||||||||| |||||||||||||||||| || ||||| ||| ||||||||||||||||||| ||||| ||||||||||| |    
T  12000646 tttaggatccgcaggaaagatatatccgcaggaaatgtgaaattatccgccggaaaatgtaaaattattcgcaggaaggacgtaacattttgcgataatt 12000745  T
Q  150 tttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||| |||||||||| ||||||| ||||||||||||    
T  12000746 tttttgcctaggctctatataattcctggctccgccactg 12000785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 99 - 190
Target Start/End: Original strand, 2475944 - 2476035
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||| ||||||||    
T  2475944 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataatttttttgcccaggctctataaaattcctgactctgccactgc 2476035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 17249463 - 17249558
Alignment:
Q  94 tatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||| |||||||||||||||  |||||||||||    
T  17249463 tatccgcaggaaatgtgaaattattcgcaggaagaaagtaacgttttgctataaatattttgcccagactctataaaattcctgactccgccactg 17249558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 185
Target Start/End: Original strand, 25563091 - 25563196
Alignment:
Q  80 aggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagc 179  Q
    |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||    || |||| |||||||||||||||| ||    
T  25563091 aggaaatgtgaaattatctgcaggaaatatgaaattatttgcagaaaggaagtaacgttttgcgataaaaaaatttcccaagctctataaaattcctggc 25563190  T
Q  180 tccgcc 185  Q
    ||||||    
T  25563191 tccgcc 25563196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 67 - 189
Target Start/End: Original strand, 15651346 - 15651468
Alignment:
Q  67 aagatatatccgtaggaaatgtgaaattatctgcaggaaa-tgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctct 165  Q
    |||||||||||  |||||||||||||||||| |||||||| ||| ||||||||||||||||||| ||||| |||||||||||| |||||||| |||||||    
T  15651346 aagatatatccccaggaaatgtgaaattatccgcaggaaaatgtaaaattattcgcaggaaggacgtaacattttgcgataaa-tttttgccgaggctct 15651444  T
Q  166 ataaaattcctagctccgccactg 189  Q
    ||| ||||| | |||| |||||||    
T  15651445 atataattcttggctctgccactg 15651468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12000563 - 12000619
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12000563 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatataggt 12000619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 16221001 - 16220919
Alignment:
Q  104 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgcca 186  Q
    ||||||| ||||||  |||| |||||| |||||||||||||||| ||||||||||||||||||||||||| || |||||||||    
T  16221001 aaatgtgcaattatatgcagaaaggaaataacgttttgcgataatttttttgcccaggctctataaaatttctggctccgcca 16220919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 25562980 - 25563034
Alignment:
Q  6 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25562980 tgtaaattccgcaggaaatacatttcctgcagattttgccaaggatttaggttcc 25563034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 304198 - 304141
Alignment:
Q  3 ttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  304198 ttgtgtaaatttcgcaggaaacacatttcttgcagattttgccaaggatttaggttcc 304141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 33909323 - 33909250
Alignment:
Q  100 caggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    ||||||||||||||||||| ||| |||||| ||||| |||||||||||| ||||||||||| ||||||||||||    
T  33909323 caggaaatgtgaaattatttgcatgaaggatgtaacattttgcgataaagtttttgcccagactctataaaatt 33909250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 2475886 - 2475962
Alignment:
Q  20 gaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattat 96  Q
    ||||| |||||| ||||||||||||||| ||| ||||||||||||| ||||||||| || |||||||||||||||||    
T  2475886 gaaactcatttcttgcagattttgccaatgatataggttccgcaggaaagatatattcgcaggaaatgtgaaattat 2475962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15651247 - 15651303
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 57  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  15651247 ttttgtgtaaattccgcaggaaacacatttcctgcgtattttgccaaggatttaggt 15651303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 45444436 - 45444376
Alignment:
Q  94 tatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaatttttt 154  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  45444436 tatctacaggaaatgtgaaattattcgcaggaaggaagtaatgttttgcaataaatttttt 45444376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17249358 - 17249416
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttc 59  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||    
T  17249358 ttttgtgtaaattccacaggaaacacatttcttgtagattttgccaaggatttaggttc 17249416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 41010515 - 41010574
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||| ||||||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  41010515 ttttgtataaattctgcaggaaacacatttcctgcagattttactaaggatttaggttcc 41010574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 42755621 - 42755571
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  42755621 tttgcgataaatttttcgcccaggctctatataattcctggctccgccact 42755571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 1542853 - 1542892
Alignment:
Q  150 tttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  1542853 tttttgcccaggctctataaaattcctggctccgccactg 1542892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 26161749 - 26161698
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||    
T  26161749 tttgcgataaattttttgcccgggctccataaatttcctggctccgccactg 26161698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 34756735 - 34756790
Alignment:
Q  5 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||||||| ||||| ||| |||||||  ||||||||||||||||||||||||    
T  34756735 gtgtaaattccgtaggaatcacgtttcctgtggattttgccaaggatttaggttcc 34756790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 4554342 - 4554296
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  4554342 cgataaattttttgcccagactccataaatttcctagctccgccact 4554296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 15429222 - 15429276
Alignment:
Q  5 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttc 59  Q
    |||||||||||||||||||||  |||||||  ||||||| |||||||||||||||    
T  15429222 gtgtaaattccgcaggaaacatgtttcctgtggattttgtcaaggatttaggttc 15429276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 33909417 - 33909359
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttc 59  Q
    ||||||| |||||| |||||| | |||||||||||||||||| |||| |||||||||||    
T  33909417 ttttgtgaaaattctgcaggagaaacatttcctgcagatttttccaaagatttaggttc 33909359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 8058355 - 8058306
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccac 187  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||| ||||    
T  8058355 tttgcgataaattttttgcccaggctccataaatttcctaactccaccac 8058306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 26655733 - 26655688
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccac 187  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||    
T  26655733 cgataaattttttgcccaggctctataaaatttttggctccgccac 26655688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 34526586 - 34526637
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||| |||| |||||  ||||||||||||| |||||||||||||||||||||    
T  34526586 tttgtgatatattttccgcccaggctctatgaaattcctagctccgccactg 34526637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 18425864 - 18425814
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    |||||||||| ||||||||||| | ||||||||||||||  ||||||||||    
T  18425864 tttgcgataatttttttgcccaagttctataaaattcctgactccgccact 18425814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 25563070 - 25563116
Alignment:
Q  80 aggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaa 126  Q
    ||||||||||||||||||  ||||||||||||||||||  |||||||    
T  25563070 aggaaatgtgaaattatccccaggaaatgtgaaattatctgcaggaa 25563116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 31162135 - 31162097
Alignment:
Q  151 ttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  31162135 ttttgcccaggctctataaatttcctggctccgccactg 31162097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 13654823 - 13654790
Alignment:
Q  27 atttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||| ||||||||||||||||||||||||    
T  13654823 atttcctgcggattttgccaaggatttaggttcc 13654790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 22483775 - 22483824
Alignment:
Q  143 gataaattttttgcccaggctctataaaattcctagctccgccactgctt 192  Q
    |||| |||||| | ||||||||||| |||||||| |||||||||||||||    
T  22483775 gatatatttttcgtccaggctctatgaaattcctggctccgccactgctt 22483824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 6402815 - 6402767
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    |||| ||||||| |||||||||| ||||| ||||| |||||||||||||    
T  6402815 cgattaatttttcgcccaggctccataaatttcctggctccgccactgc 6402767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 9011468 - 9011436
Alignment:
Q  28 tttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||||||||||||||||| ||||||||||    
T  9011468 tttcctgcagattttgccaaggctttaggttcc 9011436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 29759895 - 29759855
Alignment:
Q  13 tccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    |||||||||||||  |||||||| |||||||||||||||||    
T  29759895 tccgcaggaaacaggtttcctgccgattttgccaaggattt 29759855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 34756941 - 34756977
Alignment:
Q  150 tttttgcccaggctctataaaattcctagctccgcca 186  Q
    ||||||||||||||||||||||||| | |||||||||    
T  34756941 tttttgcccaggctctataaaattcttggctccgcca 34756977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 162; Significance: 1e-86; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 9696095 - 9696276
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9696095 ttttgtgtaaattccgcaggaaacatatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgc 9696194  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctcc 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||    
T  9696195 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaatttctggctcc 9696276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 5 - 189
Target Start/End: Original strand, 2941266 - 2941450
Alignment:
Q  5 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcagga 104  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  2941266 gtgtaaatttcgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcatgaaagatatatccgtaggaaatgtgaaattatctgcagga 2941365  T
Q  105 aatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  2941366 aatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctggctccaccactg 2941450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 23663835 - 23663648
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | ||||||||||||||| ||||||||||||||||||    
T  23663835 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttatgttccgtaagaaagatatatccgtagaaaatgtgaaattatctgc 23663736  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||    
T  23663735 aggaaatgtgaaattattcgcaggaatgaagtaacgttttgcgataaattttttatccaggctctataaaattcctggctgcgccact 23663648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 34249089 - 34248916
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |||| |||||||||||||    
T  34249089 ttttgtgtaaattctgcaggaaacacatttcctgcagattttgccaagggtttaggttccacaggaaagatatatccgtagaaaatatgaaattatctgc 34248990  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattc 174  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34248989 aggaaatgtgaaattatccgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattc 34248916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 8 - 189
Target Start/End: Original strand, 15122090 - 15122271
Alignment:
Q  8 taaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaat 107  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||| ||||    
T  15122090 taaattctgcaggaaacacatttcctgcagattttgccaaggatttacgttccgcaggaaagatatatccgtaggaaatgtaaaattatctgcagaaaat 15122189  T
Q  108 gtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||  |||||||||||||||  |||||||||||    
T  15122190 gtgaaattattcgcagaaagaaagtaacgttttgcgataaattttttgcccaaactctataaaattcctgactccgccactg 15122271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 2 - 187
Target Start/End: Original strand, 15528987 - 15529172
Alignment:
Q  2 tttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgca 101  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||    
T  15528987 tttgtgtaaattccgcaggaaatgtatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatctgtaggaaatgtgaatttatctgca 15529086  T
Q  102 ggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccac 187  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  15529087 ggaaatgtgaaattattcgtaggaaagaagtaatgttttgcgataaattttttgcctaggctctataaaattcctgactccgccac 15529172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 9046991 - 9046807
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| | || ||||||| |||||||||||||||||||||||    
T  9046991 ttttgtgtagattccgcaggaaacacatttcctgcagattttgtcaaggatttaggttccgcaagaaatatatatctgtaggaaatgtgaaattatctgc 9046892  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgcc 185  Q
    |||||||||||||||||||  ||||||||| ||||||||| ||||||||||||||||||  |||||||||||| || ||||||||    
T  9046891 aggaaatgtgaaattattcaaaggaaggaaataacgttttccgataaattttttgcccaaactctataaaatttctggctccgcc 9046807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 10397866 - 10397698
Alignment:
Q  3 ttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcag 102  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||                 |||||||||||||||||||||  |    
T  10397866 ttgtgtaaattccgcaggaaacacatttcctgcatattttgccaaggatttaggttccg-----------------taggaaatgtgaaattatctgttg 10397784  T
Q  103 gaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||    
T  10397783 gaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaattcctggttccgccact 10397698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 1781098 - 1780933
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||          
T  1781098 ttttgtgtaaattcctcaggaaacacatttcctgcagattttgccaaggatttaggttccgcataaaagatatatccgtaggaaatgtgaaatt------ 1781005  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccac 187  Q
                   ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| |||||    
T  1781004 ---------------attcgcaggaaggaagtaacgttttgcgataaattttatgcccagactctataaaattcctggctctgccac 1780933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 51 - 192
Target Start/End: Complemental strand, 31188338 - 31188197
Alignment:
Q  51 tttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaatt 150  Q
    |||||| |||||||| |||||||||||  || |||| |||||||||| | || |||||||||||||||| ||||||||||||||||||||||||||| ||    
T  31188338 tttaggatccgcaggaaagatatatcctcagaaaatttgaaattatccgtagaaaatgtgaaattattcacaggaaggaagtaacgttttgcgataattt 31188239  T
Q  151 ttttgcccaggctctataaaattcctagctccgccactgctt 192  Q
    |||||||||||||||||||||||| | |||||| ||||||||    
T  31188238 ttttgcccaggctctataaaattcatggctccgtcactgctt 31188197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 75 - 173
Target Start/End: Complemental strand, 28614406 - 28614308
Alignment:
Q  75 tccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  28614406 tccgtaggaaatgtgaaattatcagcagaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcacaggctctataaaatt 28614308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 176
Target Start/End: Complemental strand, 2836193 - 2836068
Alignment:
Q  51 tttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaatt 150  Q
    |||||| |||||||| ||  ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  2836193 tttaggatccgcaggaaaagtatatcgacaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgtcttgtaataaatt 2836094  T
Q  151 ttttgcccaggctctataaaattcct 176  Q
    |||||| ||| |||||||||||||||    
T  2836093 ttttgctcagactctataaaattcct 2836068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 14938986 - 14938826
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||  |||||||     | ||||       || || |||||||||||||||||||||||    
T  14938986 ttttatgtaaattccgcaggaaacacatttcctgcagattttgcttaggatttc----ctgcag-------at-tctgtaggaaatgtgaaattatctgc 14938899  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||    
T  14938898 aggaaatgtgaaattattcccaggaagaaagtaacattttgcgataatttttttgcccaagctctataaaatt 14938826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 31200176 - 31200045
Alignment:
Q  58 tccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgtttt-gcgataaattttttgc 156  Q
    |||||||| |||||||||| | |||||||||||||||||| |  | ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  31200176 tccgcaggtaagatatatctgcaggaaatgtgaaattatccgtggaaaatgtgaaattattcgcaggaaggaagtaacgttttagcgataatttttttgc 31200077  T
Q  157 ccaggctctataaaattcctagctccgccact 188  Q
    ||| |||||||||||||| | |||||| ||||    
T  31200076 ccatgctctataaaattcatggctccgtcact 31200045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 34188911 - 34189023
Alignment:
Q  74 atccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| ||  || |||||||||||||| ||||||||||| ||||||||| ||||||    
T  34188911 atccgcaggaaatgtgaaattatccgcaggaaatgtgaaattattcgcaagagagaggtaacgttttgcgacaaattttttgctcaggctctagaaaatt 34189010  T
Q  174 cctagctccgcca 186  Q
    ||| |||||||||    
T  34189011 cctggctccgcca 34189023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 339476 - 339566
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  339476 gcaggaaatgtgaaattaattgcaggaaggaagtaacattttgcgataaattttttgcccaagctctataaaatttctagctccgccactg 339566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 2960794 - 2960899
Alignment:
Q  83 aaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctcc 182  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||| |||| ||||| || |||||||||||||||| || |||||    
T  2960794 aaatgtgaaattatccgcaggaaatgtgaaattattcgcaagaaggaagtaacattttgcaataattttttcgctcaggctctataaaatttctggctcc 2960893  T
Q  183 gccact 188  Q
    ||||||    
T  2960894 gccact 2960899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 339375 - 339434
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  339375 ttttgtgtaaattccgtaggaaatacatttcctgcagattttaccaaggatttaggttcc 339434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 2836272 - 2836217
Alignment:
Q  5 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  2836272 gtgtaaattccgcaggaaatacatttcctgcagattttgtcaaggatttaggttcc 2836217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 21148947 - 21148896
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||| |||||||||||||  ||||||| |||| |||||||    
T  21148947 tttgcgataaatttttcgcccaggctctatgtaattcctggctctgccactg 21148896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 26218348 - 26218296
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    ||||| |||||||||| || ||||||||||| |||| || |||||||||||||    
T  26218348 tttgcaataaatttttcgctcaggctctatataatttctggctccgccactgc 26218296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 1735 - 1923
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  1735 ttttgtgtaaatttcgcaggaaacacatttcctgcagattttgccaagaatttacgttccgcaggaaagatatatccgtaggaaatgtgaacttatctgc 1834  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  1835 aggaaatgtgaaattattcgcagaaaggaagtaacgttttgcgataaattttttgcccagactctataaaattcctggctccgccactg 1923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 7501002 - 7501186
Alignment:
Q  2 tttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgca 101  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7501002 tttgtgtaaattccgcaggaaacacatttcctacagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgca 7501101  T
Q  102 ggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgcca 186  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||  | |||||||||||||||||| |||||||||    
T  7501102 ggaaatgtgaaattattcgcaggaagtaagtaacgttttgcgataaattttttatcgaggctctataaaattcctggctccgcca 7501186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 28311322 - 28311510
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||||||||   |||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||    
T  28311322 ttttgtgtaaattccgcaggaaatgtatttcctgtagattttgccaaggatttaggttccgctggaaagatatatccgtaggaaatgtgaatttatctgc 28311421  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  28311422 aggaaatgtgaaattattcgtaggaaggaagtaatgttttgcgataaattttttgcccagactctataaaattcctggctccgccactg 28311510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 14461110 - 14461297
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||| ||||||||||||||||||   || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  14461110 ttttatgtaaattccgcaggaaatgtatgtcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgc 14461209  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  14461210 aggaaatgtaaaattattcgtaggaaggaagtaacgttttgtgataaattttttgcccaggctctataaaattcctggctccgccact 14461297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 53651943 - 53652128
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||    
T  53651943 ttttgtgtaaattccgcaggaaatgcatttcctgcagattttgccaaggatttaggttctgcaggaaagatatatccgtaggaaatgtgaatttatctgc 53652042  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgcca 186  Q
    |||||||||||||||||||| |||||| | |||| |||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  53652043 aggaaatgtgaaattattcgtaggaagaacgtaatgttttgcgataaattttttgtccagactctataaaattcctggctccgcca 53652128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 44047629 - 44047817
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||    
T  44047629 ttttgtgtaaattccgcaggaaatgtatttcctgcagattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaatttatctgc 44047728  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    |||||||||||||||||| | ||||| |||||||||||||||||||||||||||| |||| ||||| ||||||||| |||||||||||||    
T  44047729 aggaaatgtgaaattatttgtaggaaagaagtaacgttttgcgataaattttttgtccagactcta-aaaattcctggctccgccactgc 44047817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 27 - 189
Target Start/End: Original strand, 12909899 - 12910059
Alignment:
Q  27 atttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaa 126  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||  ||||    
T  12909899 atttcctgcagattttgccaaagatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctacaggaaatgtgaaattattcg--ggaa 12909996  T
Q  127 ggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12909997 ggaagtaacgatttgcgataaattttttgcccaggctctataaaattcctggctccgccactg 12910059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 28 - 195
Target Start/End: Complemental strand, 43700242 - 43700075
Alignment:
Q  28 tttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaag 127  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||     
T  43700242 tttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgttggaaatgtgaaattatctgcaggaaatgtgaaattattcgcagaaaa 43700143  T
Q  128 gaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgcttgtc 195  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||||| ||  ||||||||||| |||||    
T  43700142 gaagtaacgttttgcgatatattttttacccaagctctataaaatttctgactccgccactgattgtc 43700075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 26371097 - 26370931
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||          
T  26371097 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaatt------ 26371004  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccact 188  Q
                   ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  26371003 ---------------attcgcaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaattcctggctccgccact 26370931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 37516687 - 37516856
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||                      
T  37516687 ttttgtgtaaattctgcaggaaacacatttcctgcagattttgccaaggatctaggttccgcaggaaagatatatccgtagg------------------ 37516768  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgct 191  Q
       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37516769 ---aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctggctccgccactgct 37516856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 33179109 - 33178983
Alignment:
Q  60 cgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgccca 159  Q
    |||||| |||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33179109 cgcaggaaagatatatccgcagaaaatgtgaaattatctgcagaaaatgtgaaattattcgcaggaatgaagtaacgttttgcgataaattttttgccca 33179010  T
Q  160 ggctctataaaattcctagctccgcca 186  Q
    | |||||||||||||||  ||||||||    
T  33179009 gactctataaaattcctgactccgcca 33178983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 41218358 - 41218243
Alignment:
Q  74 atccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  41218358 atccgcaggaaatgtaaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcctagactctataaaatt 41218259  T
Q  174 cctagctccgccactg 189  Q
    |||  |||||||||||    
T  41218258 cctgactccgccactg 41218243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 25391900 - 25391733
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||| ||||   ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||           
T  25391900 ttttgtgtaaattccgcaagaaatgtatttcttgcaaattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaat------- 25391808  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
                  |||||| | ||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||| |||||||    
T  25391807 --------------tattcgtaagaaggaagtaatgttttgcgataaattttttgcccaagctctataaaattcctggctctgccactg 25391733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 33179200 - 33179141
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33179200 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 33179141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 53987974 - 53988065
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaa-ttttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| | |||||||||||| || ||||||||||||    
T  53987974 gcaggaaatgtgaaattattcgcaggaaggaagtaacattttgcaataaatttttttgcccggactctataaaatttctggctccgccactg 53988065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 26278475 - 26278563
Alignment:
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||||||| |||||||||| | ||||||||||| ||||||||| |  |||||||||||| || ||||||||||||    
T  26278475 aggaaatgtgaaattattcgcaagaaggaagtatcattttgcgataatttttttgcctaaactctataaaatttcttgctccgccactg 26278563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 53068287 - 53068346
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  53068287 ttttgtgtaaattccacaggaaacacatttcctgcagattttgccaagaatttaggttcc 53068346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41218447 - 41218389
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttc 59  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  41218447 ttttgtctaaattccgcaggaaacacatttcctgccgattttgccaagaatttaggttc 41218389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35077269 - 35077321
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  35077269 ttttatgtaaattccgcaggaaacacatttcctgcagattttgcctaggattt 35077321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 53987909 - 53987961
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  53987909 ttttatgtaaattccgcaggaaacacatttcctgcagattttgcctaggattt 53987961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 38239502 - 38239555
Alignment:
Q  5 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtt 58  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  38239502 gtgtaaattctgcaggaaacacattttctgcggattttgccaaggatttaggtt 38239555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26278408 - 26278460
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  26278408 ttttatgtaaattccggaggaaacacatttcctgcagattttgcctaggattt 26278460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 41358597 - 41358541
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttg 155  Q
    |||||||||||| |||||| |||||||||||| |||||||||||||||| |||||||    
T  41358597 gcaggaaatgtgcaattatccgcaggaaggaaataacgttttgcgataatttttttg 41358541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 35077641 - 35077700
Alignment:
Q  130 agtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||| ||||||||| | ||||||||||||||||||||||||| ||| |||||||||||    
T  35077641 agtaacattttgcgattatttttttgcccaggctctataaaatttctaactccgccactg 35077700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 31989295 - 31989348
Alignment:
Q  139 ttgcgataaattttttgcccaggctctataaaattcctagctccgccactgctt 192  Q
    ||||||||||||||||||||||||||||| ||||| || ||| |||||||||||    
T  31989295 ttgcgataaattttttgcccaggctctatgaaatttctggcttcgccactgctt 31989348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 48757385 - 48757328
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactgcttgtc 195  Q
    |||||||||||||||| |||||||||||||  ||||||| ||||||||||||| ||||    
T  48757385 tttgcgataaatttttcgcccaggctctatgtaattcctggctccgccactgcatgtc 48757328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 6891511 - 6891567
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactgcttgt 194  Q
    |||||||||||||||| |||||||||||||  ||||||| |||||||||||| ||||    
T  6891511 tttgcgataaatttttcgcccaggctctatgtaattcctggctccgccactgtttgt 6891567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9600395 - 9600447
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    |||| ||||||||| |||||||||||||||||||||||||||||  |||||||    
T  9600395 ttttatgtaaattctgcaggaaacacatttcctgcagattttgcttaggattt 9600447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 6929918 - 6929867
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||| |||||||||| ||||| ||||| ||||||||||||    
T  6929918 tttgcgataaatttttcgcccaggctccataaatttcctggctccgccactg 6929867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 19269213 - 19269162
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||| |||||||||||||  ||||||| ||||||||||||    
T  19269213 tttgcgataaatttttcgcccaggctctatgtaattcctggctccgccactg 19269162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 21434441 - 21434492
Alignment:
Q  139 ttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    ||||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  21434441 ttgcgataaatttttcgcccagactctatgtaattcctagctccgccactgc 21434492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 53710664 - 53710715
Alignment:
Q  139 ttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    ||||||||||||||||||||||||||||| |||||||| | | |||||||||    
T  53710664 ttgcgataaattttttgcccaggctctatgaaattcctggtttcgccactgc 53710715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 36869966 - 36870023
Alignment:
Q  3 ttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||||||||||||||||| | ||||||   ||||||| ||||||||||||||||    
T  36869966 ttgtgtaaattccgcaggaaacccgtttcctaaggattttgtcaaggatttaggttcc 36870023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 43447620 - 43447660
Alignment:
Q  20 gaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||| |||||||||||||||||||||||||||| ||||    
T  43447620 gaaacacgtttcctgcagattttgccaaggatttagcttcc 43447660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 39772948 - 39772995
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||| ||||||| |||||||||| ||||| ||||||||||||||||||    
T  39772948 cgattaatttttcgcccaggctccataaatttcctagctccgccactg 39772995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 9600460 - 9600506
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgat 145  Q
    ||||||||| |||||||||||| |||||||||||||| |||| ||||    
T  9600460 gcaggaaatatgaaattattcgtaggaaggaagtaacattttacgat 9600506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 41358670 - 41358632
Alignment:
Q  21 aaacacatttcctgcagattttgccaaggatttaggttc 59  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  41358670 aaacacatttcctgcggattttgccaatgatttaggttc 41358632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 497401 - 497453
Alignment:
Q  8 taaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||| |||| || ||||||||||||| | |||||||| |||||||||||||||    
T  497401 taaaatccgtagcaaacacatttcctacggattttgctaaggatttaggttcc 497453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 22967442 - 22967394
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    |||| ||||||| |||||||||| ||||| ||||| |||||||||||||    
T  22967442 cgattaatttttcgcccaggctccataaatttcctggctccgccactgc 22967394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 41199893 - 41199857
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaac 135  Q
    |||||||||||| |||||| |||||||||||||||||    
T  41199893 gcaggaaatgtgcaattatccgcaggaaggaagtaac 41199857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 41199978 - 41199946
Alignment:
Q  28 tttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||| ||||||||||||||||||||||||    
T  41199978 tttcctgcggattttgccaaggatttaggttcc 41199946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 3 - 189
Target Start/End: Original strand, 11565 - 11751
Alignment:
Q  3 ttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcag 102  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  11565 ttgtgtaaattccgcagaaaatgcatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcag 11664  T
Q  103 gaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  11665 gaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgcccaggttctataaaattcctggctccgccactg 11751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 6952 - 7132
Alignment:
Q  3 ttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcag 102  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||| ||||    
T  6952 ttgtgtaaattccgaaggaaatgcatttcctgcagattttgccaaggatttaggttccgcaggaaggatatatccgtaggaaatgtgaatttatcagcag 7051  T
Q  103 gaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgc 184  Q
    ||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  7052 gaaatgtaaaattattcgtaggaaggaagtaacg-tttgcgataaattttttgcccaggttctataaaattcctagctccgc 7132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 35300504 - 35300316
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  35300504 ttttgtgtaaattccgcaggaaatgtatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgc 35300405  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  35300404 aggaaatgtgaaattattcgtaagaaggaagtaacgttttacgataaatttttttcccaagctctataaaattcctggctccgccactg 35300316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 23704545 - 23704370
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23704545 ttttgtgtaaattccgccgaaaacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgc 23704446  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcct 176  Q
    ||||||||| |||||||||||| ||| ||||||||||||| |||||||||||||  |||  |||||||||||||||    
T  23704445 aggaaatgtaaaattattcgcaagaaagaagtaacgttttacgataaattttttatccaaactctataaaattcct 23704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 26723014 - 26722847
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||          
T  26723014 ttttatgtaaattccgcaggaaacacatttcctgcagattttgtcaaggatttaggttccgcaggaaagatatatccgtaagaaatgtgaaatt------ 26722921  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
                   |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||| |||||||    
T  26722920 ---------------attcgcaggaaggaagtaacgttttgcgataaattttttgcccaagctctataaaattcctgactctgccactg 26722847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 4843432 - 4843546
Alignment:
Q  74 atccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||    
T  4843432 atccgcaggaaatgtgaaattatccgcaggaaatgtgaaattattcgcaggaaagaagtaacgttttgcgataaattttttgctcaagctctataaaatt 4843531  T
Q  174 cctagctccgccact 188  Q
    | |  ||||||||||    
T  4843532 cttgtctccgccact 4843546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 22206688 - 22206574
Alignment:
Q  75 tccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattc 174  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||     
T  22206688 tccgcaggaaatgtgagattatccgcaggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataattttcttgcccaggctctataaaattt 22206589  T
Q  175 ctagctccgccactg 189  Q
    || ||||||||||||    
T  22206588 cttgctccgccactg 22206574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 22228051 - 22228165
Alignment:
Q  75 tccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattc 174  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||     
T  22228051 tccgcaggaaatgtgagattatccgcaggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataattttcttgcccaggctctataaaattt 22228150  T
Q  175 ctagctccgccactg 189  Q
    || ||||||||||||    
T  22228151 cttgctccgccactg 22228165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 5991479 - 5991305
Alignment:
Q  6 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaa 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||     | ||||       || || | |||||||||||||||||| ||| |||    
T  5991479 tgtaaattccgcaggaaacacatttcctgcagattttgcctaggatttc----ctgcag-------at-tctgcaggaaatgtgaaattatccgcaagaa 5991392  T
Q  106 atgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgctt 192  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |   ||||||||||||||    
T  5991391 atgtaaaattattcgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatttccgactccgccactgctt 5991305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 188
Target Start/End: Complemental strand, 21932746 - 21932631
Alignment:
Q  73 tatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaat 172  Q
    |||||| ||||||| | |||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||    
T  21932746 tatccgcaggaaatataaaattatctgcaggaaatatgaaattattcgcaggaaagaagtaacattttgcgataaattttttgcccagactctataaaat 21932647  T
Q  173 tcctagctccgccact 188  Q
    ||||  ||||||||||    
T  21932646 tcctgactccgccact 21932631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 28694007 - 28693891
Alignment:
Q  73 tatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaat 172  Q
    |||||| ||||  |||||||||||| | ||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  28694007 tatccgcaggatttgtgaaattatccggaggaaatgtgaaattattcgcagaaaggaagtaaagttttgcgataatttttttgcccaggctctataaaat 28693908  T
Q  173 tcctagctccgccactg 189  Q
    |||| |||||| |||||    
T  28693907 tcctggctccgtcactg 28693891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 7873284 - 7873124
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||     | ||||       || |||  | |||||||||||||||| ||    
T  7873284 ttttatgtaaattccgcaggaaacacatttcctgcagattttgcctaggatttc----ctgcag-------at-tccacatgaaatgtgaaattatccgc 7873197  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    |||||||||||||||||| || ||||||||||||| ||||||||||| |||||||||||| ||||||||||||    
T  7873196 aggaaatgtgaaattattagcgggaaggaagtaacattttgcgataatttttttgcccagactctataaaatt 7873124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 94 - 190
Target Start/End: Original strand, 3012454 - 3012550
Alignment:
Q  94 tatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||| |||||||||||| || |||||||||||||    
T  3012454 tatccgcaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataatttttttgcccagactctataaaatttctggctccgccactgc 3012550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 814956 - 814859
Alignment:
Q  94 tatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgct 191  Q
    |||| |||| ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||||||||    
T  814956 tatccgcagaaaatgtgaaattattagcaggaatgaagtaacgttttgcgataatttttttgcccagactctatataattcctggctccgccactgct 814859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 21688244 - 21688375
Alignment:
Q  58 tccgcagggaagatatatccgtaggaaa-tgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgc 156  Q
    |||||||| ||||||||||||||  ||| |||||||||||||||||||||||||||||||||| ||| |  | |||||| ||||| ||||||||||||||    
T  21688244 tccgcaggaaagatatatccgtattaaaatgtgaaattatctgcaggaaatgtgaaattattcacagaatagcagtaacattttgtgataaattttttgc 21688343  T
Q  157 ccaggctctataaaattcctagctccgccact 188  Q
    | ||  ||||||||||||||  ||||||||||    
T  21688344 ctagattctataaaattcctgactccgccact 21688375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 19377523 - 19377638
Alignment:
Q  74 atccgtaggaaatgtgaaattatctgcaggaaa-tgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaat 172  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||||||||||| ||  |||| ||||||||||| |||||||||||| ||||||| |||    
T  19377523 atccgcaggaaatgtgaaattatccgcaggaaaatgtgaaattattcgcaggaaagacataacattttgcgataatttttttgcccagactctatataat 19377622  T
Q  173 tcctagctccgccact 188  Q
    || | |||| ||||||    
T  19377623 tcttggctctgccact 19377638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 41759596 - 41759530
Alignment:
Q  108 gtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattc 174  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  41759596 gtgaaattattcgcaggaaggaagtaacgttgtgcgataaattttttgcccagactctataaaattc 41759530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 38991236 - 38991064
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||                  ||||||||||||||  |     
T  38991236 ttttgtataaattccgttggaaacacatttcctgcagattttgccaaggatttaggatccgcaga-----------------aaatgtgaaattattcgt 38991154  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctag-ctccgccactg 189  Q
    ||||||| ||||||||||||||||||| |  |||||||||||||||| ||||||| || | ||||||||||||||| | |||||||||||    
T  38991153 aggaaatatgaaattattcgcaggaagaagataacgttttgcgataacttttttgtccggactctataaaattcctggactccgccactg 38991064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 41759680 - 41759624
Alignment:
Q  5 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccg 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41759680 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccg 41759624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 99 - 186
Target Start/End: Complemental strand, 25688189 - 25688102
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgcca 186  Q
    ||||||||||||||||||||| ||| ||||||||||| |||| |||||| |||||| |||||||||||||||||| || |||||||||    
T  25688189 gcaggaaatgtgaaattattcacagaaaggaagtaacattttacgataatttttttacccaggctctataaaatttctggctccgcca 25688102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21688154 - 21688211
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21688154 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgcgaaggatttaggtt 21688211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 21932854 - 21932798
Alignment:
Q  2 tttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtt 58  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21932854 tttgtgtaaattccgcaggaaacacatttcctgcagattttgtcaaggatttaggtt 21932798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28694116 - 28694057
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  28694116 ttttgtgtaaattctgcaggaaacacatttcctgcagattttgcccaggatttaggttcc 28694057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42439650 - 42439591
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  42439650 ttttgtgtaaatttcgcaggaaacacattttctgcagattttgccaaggatttaggttcc 42439591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 30852447 - 30852537
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| |||||  |||| |||||| || |||||| |||||    
T  30852447 gcaggaaatgtgaaattattcgcaggaaggaagcaacattttgcgataatttttttccccagattctaaaaaatttctggctccgtcactg 30852537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 42439535 - 42439466
Alignment:
Q  104 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 173  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||||||||| | ||||||||||    
T  42439535 aaatgtgaaattattcgtagaaaagaagtaacgttttgcgataaattttttgcccagaccctataaaatt 42439466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3012349 - 3012408
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  3012349 ttttgtgtacattccgcaggaaacacacttcctgcagattttgccaaggatataggttcc 3012408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38129069 - 38129010
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||    
T  38129069 ttttgtgtaaattctgaaggaaacacatttcctgcatattttgccaaggatttaggttcc 38129010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 4843344 - 4843402
Alignment:
Q  2 tttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  4843344 tttgtgtacattccgcatgaaacacatttcatgcagattttgccaaggatttaggttcc 4843402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 38128960 - 38128876
Alignment:
Q  98 tgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctcc 182  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||||| |||||||| ||  | ||||||||| || |||||    
T  38128960 tgcaggaaatgtgaaattatctgcaggaaggaaataacgttttgcgataaaatttttgcctagattttataaaatttctggctcc 38128876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 815061 - 815002
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||||||    
T  815061 ttttgtgtaaattccgcagaaaatacatttcttgcagattttgccaagaatttaggttcc 815002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 19377435 - 19377490
Alignment:
Q  2 tttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 57  Q
    |||||| |||||||| |||||| |||||||||||||||||||||||||||||||||    
T  19377435 tttgtggaaattccgaaggaaatacatttcctgcagattttgccaaggatttaggt 19377490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 41862329 - 41862234
Alignment:
Q  94 tatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||| |||||||||||  |||||| ||||| || ||||||  ||||||||||||||||||| | |||  |||||||||||||| ||||||||||||    
T  41862329 tatccgcaggaaatgtataattatccgcagaaatgaagtattgttttgcgataaattttttactcagattctataaaattcctggctccgccactg 41862234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30852382 - 30852434
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    |||| |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  30852382 ttttatgtaaattccgcaggaaacacatttccttcagattttgcctaggattt 30852434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 19400247 - 19400298
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  19400247 tttgcgataaactttttgcccaggctctataaaatttctggctccgccactg 19400298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 25688249 - 25688202
Alignment:
Q  6 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  25688249 tgtaaattccgcaggaaacatatttcctgcagattttgcctaggattt 25688202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 27387215 - 27387165
Alignment:
Q  139 ttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||||||||    
T  27387215 ttgcgataaattttttgcccaggctctatgaaatttctggctccgccactg 27387165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 22206745 - 22206709
Alignment:
Q  6 tgtaaattccgcaggaaacacatttcctgcagatttt 42  Q
    |||||||||||||||||||||||||||||||||||||    
T  22206745 tgtaaattccgcaggaaacacatttcctgcagatttt 22206709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 22227994 - 22228030
Alignment:
Q  6 tgtaaattccgcaggaaacacatttcctgcagatttt 42  Q
    |||||||||||||||||||||||||||||||||||||    
T  22227994 tgtaaattccgcaggaaacacatttcctgcagatttt 22228030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 38575174 - 38575127
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||||||    
T  38575174 cgataaattttttgctcaggctctatgaaattcctggctccgccactg 38575127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 45197906 - 45197961
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactgcttg 193  Q
    ||||||||||||||||||||||  ||||||| |||| || ||||||||||||||||    
T  45197906 tttgcgataaattttttgcccacactctatagaatttctggctccgccactgcttg 45197961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 38128986 - 38128932
Alignment:
Q  51 tttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgcaggaa 105  Q
    |||||| |||||||| |||||||||  | ||||||||||||||||||||||||||    
T  38128986 tttaggatccgcaggaaagatatatgtgcaggaaatgtgaaattatctgcaggaa 38128932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 3012432 - 3012477
Alignment:
Q  51 tttaggttccgcagggaagatatatccgtaggaaatgtgaaattat 96  Q
    |||||| |||||||| |||||||||||| |||||||||||||||||    
T  3012432 tttaggatccgcaggaaagatatatccgcaggaaatgtgaaattat 3012477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 22937752 - 22937701
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||| || ||||||||||  ||||||| ||||||||||||    
T  22937752 tttgcgataaatttttcgctcaggctctatgtaattcctggctccgccactg 22937701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 37001265 - 37001214
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||| ||||||||||| |||| ||||| ||||| ||||||||||||||||||    
T  37001265 tttgggataaatttttcgcccgggctccataaatttcctagctccgccactg 37001214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 38826074 - 38826023
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||| |||||| ||||||  ||||||| ||||||||||||    
T  38826074 tttgcgataaatttttcgcccagactctatgtaattcctggctccgccactg 38826023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 20965955 - 20965993
Alignment:
Q  151 ttttgcccaggctctataaaattcctagctccgccactg 189  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  20965955 ttttgcccaggctctataaatttcctggctccgccactg 20965993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 1756869 - 1756821
Alignment:
Q  12 ttccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 60  Q
    ||||||||||||||  |||||||| || ||||||| |||||||||||||    
T  1756869 ttccgcaggaaacatgtttcctgcggaatttgccatggatttaggttcc 1756821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 36631983 - 36632035
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactgcttgt 194  Q
    |||| |||||||||||| ||||| ||||| ||||| |||||||||||| ||||    
T  36631983 cgattaattttttgcccgggctccataaatttcctggctccgccactgattgt 36632035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 4217 - 4305
Alignment:
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  | ||||||||||||    
T  4217 aggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatttatggctccgccactg 4305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 4155 - 4202
Alignment:
Q  6 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 53  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  4155 tgtaaattccgtaggaaacacatttcctgcagattttgcccaggattt 4202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 109375 - 109192
Alignment:
Q  1 ttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagggaagatatatccgtaggaaatgtgaaattatctgc 100  Q
    ||||||||||||||||||| |||||||| | ||||||||||||| ||| ||||||||||| ||||  |||||   || |||||  |  | |    ||  |    
T  109375 ttttgtgtaaattccgcagaaaacacatgttctgcagattttgctaagaatttaggttcc-caggtgagataataccataggattttagga----tccac 109281  T
Q  101 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaat-tttttgcccaggctctataaaattcctagctccgccact 188  Q
    |||||| ||||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||||||| ||||| |||||||| |||||    
T  109280 aggaaacgtgaaattattcgcaggaaggaagtaatgttttgcaataaatatttttgtccaggctctatgaaatttctagctccaccact 109192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 112179 - 112108
Alignment:
Q  103 gaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaat-tttttgcccaggctctataaaatt 173  Q
    |||| ||||||||||| ||||||||||||||| ||||||| |||||| ||||||||||||||| || |||||    
T  112179 gaaacgtgaaattatttgcaggaaggaagtaatgttttgcaataaatatttttgcccaggctcaatgaaatt 112108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 214069 - 214018
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactg 189  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  214069 tttgcgataaactttttgcccaagctctataaaattcctagctccgccactg 214018  T

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Target: scaffold0178 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 21995 - 21940
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactgcttg 193  Q
    ||||||||||||||||||||  ||||| ||||| ||||| ||||||||||| ||||    
T  21995 tttgcgataaattttttgcctgggctccataaatttcctggctccgccactacttg 21940  T

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Target: scaffold0178; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 27497 - 27442
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaattcctagctccgccactgcttg 193  Q
    ||||||||||||||||||||  ||||| ||||| ||||| ||||||||||| ||||    
T  27497 tttgcgataaattttttgcctgggctccataaatttcctggctccgccactacttg 27442  T

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Target: scaffold0170 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 9343 - 9396
Alignment:
Q  138 tttgcgataaattttttgcccaggctctataaaa-ttcctagctccgccactgc 190  Q
    ||||||||||| ||||||  ||| |||||||||| |||||||||||||||||||    
T  9343 tttgcgataaactttttgttcagactctataaaaattcctagctccgccactgc 9396  T

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Target: scaffold0108 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 20964 - 20928
Alignment:
Q  99 gcaggaaatgtgaaattattcgcaggaaggaagtaac 135  Q
    |||||||||||| |||||| |||||||||||||||||    
T  20964 gcaggaaatgtgcaattatccgcaggaaggaagtaac 20928  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 479465 - 479417
Alignment:
Q  142 cgataaattttttgcccaggctctataaaattcctagctccgccactgc 190  Q
    |||| ||||||| |||||||||| ||||| ||||| |||||||||||||    
T  479465 cgattaatttttcgcccaggctccataaatttcctggctccgccactgc 479417  T

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