View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10517_low_14 (Length: 240)
Name: NF10517_low_14
Description: NF10517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10517_low_14 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 33221062 - 33221301
Alignment:
| Q |
1 |
gaatttgggacagctggggtcaaactataacttagacatcccagagtgcgaagctcggcggtgagcttgggacgcacaggaattggagtattgaggttag |
100 |
Q |
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| T |
33221062 |
gaatttgggacagctggggtcaaactataacttagacatcccagagtgcgaagctcggcggtgagcttgggacgcacaggaattggagtattgaggttag |
33221161 |
T |
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| Q |
101 |
gggttcaacctcctccttgctacccaccttcgactaacaaggattgacaattgacctaataccatttattgttaaaataaaaactgtagctaagataacc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33221162 |
gggttcaacctcctccttgctacccaccttcgactaacaaggattgacaattgacctaataccatttattgttaaaataaaaactgtagctaagataacc |
33221261 |
T |
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| Q |
201 |
taaggtttgtagtaactgagacgaatttatgtagggcttt |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
33221262 |
taaggtttgtagtaactgagacgaatttatgtagggcttt |
33221301 |
T |
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