View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10518_low_14 (Length: 283)
Name: NF10518_low_14
Description: NF10518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10518_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 6849587 - 6849849
Alignment:
| Q |
1 |
atgaagttcttaaaaaactagcaactaaaccgaaatctcctttgtactcttttgttcagtcatggccatcttacttctgttgaggaaaaattccactccc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6849587 |
atgaagttcttaaaaaactagcaactaaaccgaaatctcctttgtactcttttgttcagtcatggccatcttacttctgttgaggaaaaattccactccc |
6849686 |
T |
|
| Q |
101 |
caaataaccaaccttatcgtgaggcaaaaaccaagaattgataacaatcgaatccaagtaaaaaccaacttctcaagaaacttgttagctttttcgaaaa |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6849687 |
caaataaccaaccttattgtgaggcaaaaaccaagaattgataacaatcgaatccaagtaaaaaccaacttctcaagaaacttgttagctttttcgaaaa |
6849786 |
T |
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| Q |
201 |
caggatctggtgtgctcatttgcaaatgttatatnnnnnnngagcaagacttgtgagagttata |
264 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
6849787 |
caggatctggtgtgctcatttgcaaatgttata-aaaaaaagagcaagacttgtgagagttata |
6849849 |
T |
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