View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10518_low_18 (Length: 253)
Name: NF10518_low_18
Description: NF10518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10518_low_18 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 43574413 - 43574648
Alignment:
| Q |
18 |
gatgcaataacataaacattacacattctattatatatcattcatgacaatcaattattgttatctttattgaacagcttcgtgacaggtcatgtgaacg |
117 |
Q |
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| T |
43574413 |
gatgcaataacataaacattacacattctattatatatcattcatgacaatcaattattgttatctttattgaacagcttcgtgacaggtcatgcgaacg |
43574512 |
T |
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| Q |
118 |
aaaattctttgctttcaagtacatatttcaaacaactaatcatcacaagctaaataaaaatgattgcctataaattgctgccataaatatcacttataaa |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
43574513 |
aaaattctttgctttcaagtacatatttcaaacaactaatcatcacaagctaaataaaaatgattgcctataaattgctaccataaatatcacttataaa |
43574612 |
T |
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| Q |
218 |
gtggattttagttaccatgcttgtaatgtcatatac |
253 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
43574613 |
gtggattttagttaccatgcttgtaatgtcatatac |
43574648 |
T |
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