View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10518_low_19 (Length: 250)
Name: NF10518_low_19
Description: NF10518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10518_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 35604 - 35845
Alignment:
| Q |
1 |
agtattattctttcgttctttctttattcatcaactactttcattcagtttttatatgtattttgtaaggaccttcatacttggataacaacccatatga |
100 |
Q |
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| T |
35604 |
agtatttttctttcgttctttctttattcatcaactactttcattcagtttttatatgtattttgtaaggaccttcatacttggataacaacccatatga |
35703 |
T |
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| Q |
101 |
tatacacctaggatataaagttgttaattataaccttttatcacttgattgaaatcacttgtccctttttgtctcctttcatgtctattcttttgaaaaa |
200 |
Q |
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| T |
35704 |
tatacacctaggatataaagttgttaattataaccttttatcacttgattgaaatcacttgtccctttttgtctcctttcatgtctattcttttgaaaaa |
35803 |
T |
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| Q |
201 |
tgacaatttgtcacattgttttcaaactcgtatgttcatctc |
242 |
Q |
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||||||||||| |||||||||||||||||||||||||||||| |
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| T |
35804 |
tgacaatttgtgacattgttttcaaactcgtatgttcatctc |
35845 |
T |
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