View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10518_low_23 (Length: 239)
Name: NF10518_low_23
Description: NF10518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10518_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 14346314 - 14346138
Alignment:
| Q |
14 |
agtttcattccgagtcgcgtaaaaaatgtttcatagaaatagcaaaagtctgaacttatcatctttcattcttctaaaacaaacacgttctgaatctaca |
113 |
Q |
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| T |
14346314 |
agtttcattccaagttgcgtaaaaaatgtttcatagaaataacaaaagtctgaact-atcatctttcattcttctaaaacaaacacgttctgaatctaca |
14346216 |
T |
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| Q |
114 |
cagaaatcaaacagaacttttgtttcagtttttccaacaagttttttcttcaaaagttctatagattttgaagaacaatattctgatt |
201 |
Q |
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| T |
14346215 |
cagaaatcaaagagaacttttgtttcagtttttcc----------ttcttcaaaagttctatagattttgaagaacaatattctgatt |
14346138 |
T |
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