View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10518_low_24 (Length: 237)
Name: NF10518_low_24
Description: NF10518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10518_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 9998261 - 9998042
Alignment:
| Q |
1 |
aaacttttaaattaatcaatggtgattcagtgatcaagaatgttggctgaattggagcagcgttttgtcaagtttggatgttataacatagcaaagagtt |
100 |
Q |
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| T |
9998261 |
aaacttttaaattaatcaatggtgattcagtgatcaagaatgttggctgaattggagcagcgttttgtcaagtttggatgttataacatagcaaagagtt |
9998162 |
T |
|
| Q |
101 |
gctataaaaatattttgtgcttgttctttattttgcccttttcacttataagaagaagtgattctgctaagataagagagaatgggagttggtgagtttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
9998161 |
gctataaaaatattttgtgcttgttctttattttgcccttttcacttataagaagaagtgattctgctaagataagagagaaggggagttggtgagtttc |
9998062 |
T |
|
| Q |
201 |
tatttccgttaatatctatc |
220 |
Q |
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|||||||||||||||||||| |
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| T |
9998061 |
tatttccgttaatatctatc |
9998042 |
T |
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