View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10518_low_5 (Length: 362)
Name: NF10518_low_5
Description: NF10518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10518_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 14 - 345
Target Start/End: Complemental strand, 35015183 - 35014846
Alignment:
| Q |
14 |
agatggtattttactggtacttcataggaccaccaatcatgaattatggatcctataagatgatgccgtgtggcacagttcaaaatttgaataattgatt |
113 |
Q |
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| T |
35015183 |
agatggtattttactggtacttcataggaccaccaatcatgaattatggatcctataagatgatgccgtgtggcacagttcaaaatttgaataattgatt |
35015084 |
T |
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| Q |
114 |
gtggaaaactcatgtagta------gtatatcacattggcttgctatagataaagccagaaataaaatttatgaatagagtttaagttgattgtatttgt |
207 |
Q |
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| T |
35015083 |
gtggaaaactcatgtagtataatttgtatatcacattggcttgctatagataaggccagaaataaaatttatgaatagagtttaagttgattgtatttct |
35014984 |
T |
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| Q |
208 |
gtatggttgaattaaaacaatctttacctacaagttagtgttacagttgctaaaacttacataaataatttactcaattgaatataaaataatttactat |
307 |
Q |
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| T |
35014983 |
gtatggttgaattaaaacaatctttacctacaagttagtgttacagttgctaaaacttacataaataatttactcaattgaatataaaataatttactat |
35014884 |
T |
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| Q |
308 |
ctcggttgtaccgacacttctgattgaaggcgtgtcct |
345 |
Q |
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| T |
35014883 |
ctaggttgtaccgacacttctgattgaaggcgtgtcct |
35014846 |
T |
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