View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1051_low_11 (Length: 251)

Name: NF1051_low_11
Description: NF1051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1051_low_11
NF1051_low_11
[»] chr7 (22 HSPs)
chr7 (162-238)||(13967305-13967381)
chr7 (162-238)||(11304900-11304976)
chr7 (162-238)||(26117227-26117303)
chr7 (162-238)||(13022893-13022969)
chr7 (162-238)||(16949109-16949185)
chr7 (162-238)||(49153837-49153913)
chr7 (162-224)||(43-105)
chr7 (162-220)||(12458194-12458252)
chr7 (163-238)||(11387066-11387141)
chr7 (163-217)||(13667094-13667148)
chr7 (163-220)||(14285014-14285071)
chr7 (163-220)||(20748164-20748221)
chr7 (162-221)||(23504507-23504566)
chr7 (162-220)||(14139233-14139291)
chr7 (163-220)||(15101241-15101298)
chr7 (163-220)||(19148765-19148822)
chr7 (169-220)||(19614229-19614280)
chr7 (163-220)||(14262882-14262939)
chr7 (162-221)||(18052590-18052649)
chr7 (163-224)||(12205438-12205499)
chr7 (163-220)||(15341985-15342042)
chr7 (163-220)||(16070933-16070990)
[»] chr5 (21 HSPs)
chr5 (162-238)||(22504139-22504215)
chr5 (162-238)||(20343742-20343818)
chr5 (162-238)||(14885823-14885899)
chr5 (162-238)||(37542213-37542289)
chr5 (165-238)||(25849535-25849608)
chr5 (162-238)||(24797229-24797305)
chr5 (163-220)||(22234753-22234810)
chr5 (163-220)||(24619128-24619185)
chr5 (163-220)||(24715359-24715416)
chr5 (163-220)||(24748387-24748444)
chr5 (169-220)||(21679617-21679668)
chr5 (181-221)||(28893793-28893833)
chr5 (181-221)||(28915264-28915304)
chr5 (181-221)||(28922619-28922659)
chr5 (181-221)||(28930532-28930572)
chr5 (162-221)||(17268166-17268225)
chr5 (181-220)||(20777391-20777430)
chr5 (165-220)||(21871886-21871941)
chr5 (165-220)||(21876166-21876221)
chr5 (163-211)||(21338130-21338178)
chr5 (168-220)||(22463429-22463481)
[»] chr4 (11 HSPs)
chr4 (162-238)||(11205881-11205957)
chr4 (162-238)||(3263444-3263520)
chr4 (162-238)||(29452187-29452263)
chr4 (162-238)||(44660516-44660592)
chr4 (163-235)||(16149260-16149332)
chr4 (163-235)||(16153406-16153478)
chr4 (162-221)||(51605442-51605501)
chr4 (163-220)||(15247488-15247545)
chr4 (163-215)||(15357771-15357823)
chr4 (163-220)||(15002015-15002072)
chr4 (163-217)||(15071926-15071980)
[»] scaffold1373 (1 HSPs)
scaffold1373 (162-238)||(1487-1563)
[»] chr8 (17 HSPs)
chr8 (162-238)||(27356148-27356224)
chr8 (162-238)||(16270317-16270393)
chr8 (162-238)||(6605270-6605346)
chr8 (162-238)||(14566754-14566830)
chr8 (165-220)||(23656557-23656612)
chr8 (162-220)||(20974749-20974807)
chr8 (162-220)||(29302519-29302577)
chr8 (162-224)||(31415564-31415626)
chr8 (162-221)||(31569935-31569994)
chr8 (163-220)||(20984641-20984698)
chr8 (165-219)||(21842048-21842102)
chr8 (163-220)||(20009015-20009072)
chr8 (163-220)||(22372561-22372618)
chr8 (162-217)||(21324362-21324417)
chr8 (163-220)||(19861065-19861122)
chr8 (163-220)||(22052493-22052550)
chr8 (162-214)||(19979603-19979655)
[»] chr3 (22 HSPs)
chr3 (162-238)||(10384846-10384922)
chr3 (162-238)||(28755493-28755569)
chr3 (163-238)||(16328539-16328614)
chr3 (162-238)||(11960047-11960123)
chr3 (162-238)||(47125119-47125195)
chr3 (163-220)||(12359406-12359463)
chr3 (163-216)||(12179535-12179588)
chr3 (163-220)||(16827082-16827139)
chr3 (162-221)||(13943216-13943275)
chr3 (162-221)||(44778439-44778498)
chr3 (162-220)||(16379806-16379864)
chr3 (163-220)||(16835389-16835446)
chr3 (165-220)||(13319383-13319438)
chr3 (169-220)||(14087866-14087917)
chr3 (162-221)||(41178714-41178773)
chr3 (169-220)||(13971005-13971056)
chr3 (163-214)||(15228848-15228899)
chr3 (163-214)||(15234716-15234767)
chr3 (171-217)||(18133233-18133279)
chr3 (171-217)||(31694073-31694119)
chr3 (171-217)||(31940099-31940145)
chr3 (181-217)||(10418942-10418978)
[»] chr1 (13 HSPs)
chr1 (162-238)||(20295973-20296049)
chr1 (163-238)||(52987333-52987408)
chr1 (162-238)||(21952470-21952546)
chr1 (162-238)||(37678641-37678717)
chr1 (162-238)||(31538719-31538795)
chr1 (162-220)||(20834622-20834680)
chr1 (162-224)||(24098325-24098387)
chr1 (163-220)||(19855884-19855941)
chr1 (163-220)||(20938786-20938843)
chr1 (162-214)||(48424489-48424541)
chr1 (163-220)||(21744275-21744332)
chr1 (163-219)||(19661859-19661915)
chr1 (169-217)||(20060681-20060729)
[»] scaffold1715 (1 HSPs)
scaffold1715 (162-238)||(539-615)
[»] scaffold0088 (1 HSPs)
scaffold0088 (162-238)||(28510-28586)
[»] scaffold0010 (2 HSPs)
scaffold0010 (162-238)||(40986-41062)
scaffold0010 (154-217)||(46044-46107)
[»] chr6 (9 HSPs)
chr6 (162-238)||(24365822-24365898)
chr6 (162-220)||(10467644-10467702)
chr6 (163-220)||(5296002-5296059)
chr6 (162-221)||(28281608-28281667)
chr6 (163-220)||(19436430-19436487)
chr6 (163-220)||(21473029-21473086)
chr6 (181-235)||(15460749-15460803)
chr6 (174-220)||(18796118-18796164)
chr6 (159-217)||(19880729-19880787)
[»] chr2 (13 HSPs)
chr2 (166-238)||(20829436-20829508)
chr2 (162-238)||(1064928-1065004)
chr2 (162-238)||(31831835-31831911)
chr2 (163-235)||(23277956-23278028)
chr2 (162-218)||(19718207-19718263)
chr2 (162-221)||(12575547-12575606)
chr2 (171-235)||(24949770-24949834)
chr2 (174-221)||(27788934-27788981)
chr2 (163-217)||(19651241-19651295)
chr2 (163-220)||(23295130-23295187)
chr2 (163-220)||(25264249-25264306)
chr2 (163-214)||(23111937-23111988)
chr2 (168-218)||(27209368-27209418)
[»] scaffold0708 (1 HSPs)
scaffold0708 (162-238)||(6798-6874)
[»] scaffold0089 (1 HSPs)
scaffold0089 (163-231)||(15367-15435)
[»] scaffold0009 (1 HSPs)
scaffold0009 (162-220)||(250208-250266)
[»] scaffold0124 (1 HSPs)
scaffold0124 (163-235)||(13780-13852)
[»] scaffold0742 (1 HSPs)
scaffold0742 (162-220)||(6808-6866)
[»] scaffold0239 (1 HSPs)
scaffold0239 (162-220)||(11439-11497)
[»] scaffold0213 (1 HSPs)
scaffold0213 (162-220)||(4989-5047)
[»] scaffold0298 (3 HSPs)
scaffold0298 (163-220)||(21578-21635)
scaffold0298 (163-235)||(10711-10783)
scaffold0298 (163-235)||(14481-14553)
[»] scaffold0046 (1 HSPs)
scaffold0046 (159-220)||(80482-80543)
[»] scaffold0031 (2 HSPs)
scaffold0031 (163-220)||(109225-109282)
scaffold0031 (162-238)||(55644-55720)
[»] scaffold0304 (1 HSPs)
scaffold0304 (165-220)||(2141-2196)
[»] scaffold0232 (1 HSPs)
scaffold0232 (163-234)||(342-413)
[»] scaffold0348 (1 HSPs)
scaffold0348 (162-220)||(10542-10600)
[»] scaffold0190 (1 HSPs)
scaffold0190 (162-216)||(31972-32026)
[»] scaffold0149 (2 HSPs)
scaffold0149 (166-220)||(6006-6060)
scaffold0149 (166-220)||(10437-10491)
[»] scaffold0060 (1 HSPs)
scaffold0060 (162-220)||(44378-44436)
[»] scaffold0004 (1 HSPs)
scaffold0004 (163-217)||(324302-324356)
[»] scaffold0139 (1 HSPs)
scaffold0139 (163-220)||(35065-35122)
[»] scaffold0106 (1 HSPs)
scaffold0106 (163-220)||(33006-33063)
[»] scaffold0049 (1 HSPs)
scaffold0049 (163-220)||(50529-50586)
[»] scaffold1830 (1 HSPs)
scaffold1830 (163-235)||(574-646)
[»] scaffold0034 (1 HSPs)
scaffold0034 (163-235)||(3607-3679)
[»] scaffold0114 (1 HSPs)
scaffold0114 (162-217)||(21485-21540)
[»] scaffold0035 (1 HSPs)
scaffold0035 (163-218)||(4346-4401)
[»] scaffold1646 (1 HSPs)
scaffold1646 (162-220)||(919-977)
[»] scaffold0076 (2 HSPs)
scaffold0076 (162-220)||(55553-55611)
scaffold0076 (169-220)||(32337-32388)
[»] scaffold0266 (1 HSPs)
scaffold0266 (163-220)||(15707-15764)
[»] scaffold0104 (1 HSPs)
scaffold0104 (163-220)||(23809-23866)
[»] scaffold0053 (2 HSPs)
scaffold0053 (163-220)||(47688-47745)
scaffold0053 (163-217)||(56501-56555)
[»] scaffold0020 (1 HSPs)
scaffold0020 (163-220)||(100216-100273)
[»] scaffold0011 (2 HSPs)
scaffold0011 (163-220)||(194358-194415)
scaffold0011 (163-235)||(150149-150221)
[»] scaffold0249 (1 HSPs)
scaffold0249 (163-235)||(627-699)
[»] scaffold0203 (1 HSPs)
scaffold0203 (163-235)||(12953-13025)
[»] scaffold0126 (1 HSPs)
scaffold0126 (163-235)||(42497-42569)
[»] scaffold0077 (1 HSPs)
scaffold0077 (163-235)||(20231-20303)
[»] scaffold0751 (1 HSPs)
scaffold0751 (163-218)||(3773-3828)
[»] scaffold0404 (1 HSPs)
scaffold0404 (163-238)||(6327-6402)
[»] scaffold0029 (1 HSPs)
scaffold0029 (169-220)||(114154-114205)
[»] scaffold1288 (1 HSPs)
scaffold1288 (166-220)||(1511-1565)
[»] scaffold0367 (1 HSPs)
scaffold0367 (163-217)||(5892-5946)
[»] scaffold0222 (2 HSPs)
scaffold0222 (166-220)||(8656-8710)
scaffold0222 (163-216)||(2009-2062)
[»] scaffold0090 (2 HSPs)
scaffold0090 (162-220)||(20444-20502)
scaffold0090 (162-220)||(24606-24664)
[»] scaffold2112 (1 HSPs)
scaffold2112 (163-220)||(573-630)
[»] scaffold0600 (1 HSPs)
scaffold0600 (163-220)||(5371-5428)
[»] scaffold0523 (1 HSPs)
scaffold0523 (163-220)||(1464-1521)
[»] scaffold0405 (1 HSPs)
scaffold0405 (163-220)||(133-190)
[»] scaffold0261 (2 HSPs)
scaffold0261 (163-220)||(13993-14050)
scaffold0261 (163-220)||(22172-22229)
[»] scaffold0120 (1 HSPs)
scaffold0120 (163-220)||(206-263)
[»] scaffold0108 (1 HSPs)
scaffold0108 (163-220)||(48699-48756)
[»] scaffold0067 (1 HSPs)
scaffold0067 (163-220)||(28219-28276)
[»] scaffold0026 (1 HSPs)
scaffold0026 (163-220)||(50405-50462)
[»] scaffold0235 (2 HSPs)
scaffold0235 (163-223)||(10111-10171)
scaffold0235 (163-223)||(20325-20385)
[»] scaffold0156 (1 HSPs)
scaffold0156 (163-235)||(35693-35765)
[»] scaffold0501 (1 HSPs)
scaffold0501 (163-238)||(3771-3846)
[»] scaffold0215 (1 HSPs)
scaffold0215 (163-238)||(29225-29300)
[»] scaffold0165 (1 HSPs)
scaffold0165 (163-218)||(6027-6082)
[»] scaffold0028 (1 HSPs)
scaffold0028 (169-220)||(49174-49225)
[»] scaffold0017 (1 HSPs)
scaffold0017 (163-238)||(196141-196216)
[»] scaffold0244 (1 HSPs)
scaffold0244 (163-217)||(18947-19001)
[»] scaffold0234 (1 HSPs)
scaffold0234 (163-205)||(23733-23775)
[»] scaffold0192 (1 HSPs)
scaffold0192 (163-220)||(28119-28177)
[»] scaffold0865 (1 HSPs)
scaffold0865 (163-220)||(2926-2983)
[»] scaffold0509 (2 HSPs)
scaffold0509 (163-224)||(1791-1852)
scaffold0509 (163-224)||(8219-8280)
[»] scaffold0309 (1 HSPs)
scaffold0309 (163-220)||(11388-11445)
[»] scaffold0133 (1 HSPs)
scaffold0133 (163-220)||(29939-29996)
[»] scaffold0122 (1 HSPs)
scaffold0122 (162-223)||(38601-38662)
[»] scaffold0064 (1 HSPs)
scaffold0064 (163-224)||(39414-39475)
[»] scaffold0003 (1 HSPs)
scaffold0003 (163-220)||(194841-194898)
[»] scaffold0894 (1 HSPs)
scaffold0894 (162-238)||(3503-3579)
[»] scaffold0420 (1 HSPs)
scaffold0420 (162-218)||(243-299)


Alignment Details
Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 13967305 - 13967381
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13967305 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 13967381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 11304900 - 11304976
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  11304900 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcgtatgcttctaggcaattgcgtgttcatgagaa 11304976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 26117227 - 26117303
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  26117227 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcgtatgcttctaggcagttgcgtgttcatgagaa 26117303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 13022969 - 13022893
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||| |  ||||||||||    
T  13022969 ctgggcttaggtggtgttcttatgcaagatggtaaggtggtagcatatgcttctaggcagttgaggattcatgagaa 13022893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 16949109 - 16949185
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||| ||||||||||||||| |||||||||  ||||||||||||| ||| | |||||||||||    
T  16949109 ctgggcttaggtggtgttttgatgcaagatggtaaggtggtagctaatgcttctaggcagttgagagttcatgagaa 16949185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 49153913 - 49153837
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||| ||||||||||||| | ||||||||| ||||| |||||||| || ||||||||||||||    
T  49153913 ctgggcttaggtggtgttttgatgcaagatggcaaggtggtagcgtatgcctctaggcagttacgtgttcatgagaa 49153837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 43 - 105
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattg 224  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  43 ctgggcttaggttgtgttttgatgcaagatggtaaggtggtagcttatgcttctaggcaattg 105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 12458252 - 12458194
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  12458252 ctgggtttaggtggtgttctgatgcaggatggtatggtggtagcatatgcttctaggca 12458194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 11387066 - 11387141
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||| ||| || | |||||||||||    
T  11387066 tgggcttgggtggtgttttgatgcaagatggtaaggtggtagcgtatgcttctagacaactgagagttcatgagaa 11387141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 13667148 - 13667094
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  13667148 tgggcttaggtggtgttttgatgcaagatggtaaggtggtagcgtatgcttctag 13667094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 14285014 - 14285071
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  14285014 tgggcttgggtggtgttttgatgcaagatggtaaggtggtagcgtatgcttctaggca 14285071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 20748221 - 20748164
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| ||||||||||||| |  |||||||||||||||||||||||    
T  20748221 tgggcttaggtggtgttttgatgcaagatggcaaagtggtagcatatgcttctaggca 20748164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 23504507 - 23504566
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    ||||| ||||| |||||| ||||||||||||| | |||||||||||||||||||||||||    
T  23504507 ctgggtttaggaggtgttttgatgcaagatggcaaggtggtagcatatgcttctaggcaa 23504566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 14139291 - 14139233
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||| ||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  14139291 ctgggtttaggaggtgttttgatgcaagatggtaaggtggtagcgtatgcttctaggca 14139233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 15101241 - 15101298
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| | |||||||||||||  |||||||| ||||||||||||||    
T  15101241 tgggcttaggtggtgttttaatgcaagatggtaaagtggtagcttatgcttctaggca 15101298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 19148822 - 19148765
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| ||||||||||||| |  |||||||| ||||||||||||||    
T  19148822 tgggcttaggtggtgttttgatgcaagatggcaaagtggtagcttatgcttctaggca 19148765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 19614280 - 19614229
Alignment:
Q  169 taggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||| |||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  19614280 taggaggtgttttgatgcaagatggtaaggtggtagcgtatgcttctaggca 19614229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 14262882 - 14262939
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||| ||||||| ||||||||||||| |  |||||||| ||||||||||||||    
T  14262882 tgggcttagatggtgttttgatgcaagatggcaaagtggtagcgtatgcttctaggca 14262939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 18052590 - 18052649
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    ||||| ||||| |||||| | ||||||||||| | ||||||||| |||||||||||||||    
T  18052590 ctgggtttaggaggtgttttaatgcaagatggcaaggtggtagcgtatgcttctaggcaa 18052649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 12205438 - 12205499
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattg 224  Q
    |||| ||||||||||| || ||||||||| ||| ||||||||| |||||||| || ||||||    
T  12205438 tgggtttaggtggtgtgcttatgcaagatagtaaggtggtagcttatgcttcgagacaattg 12205499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 15342042 - 15341985
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||| ||||||||| |||||||||| || |  |||||||| ||||||||||||||    
T  15342042 tgggcttgggtggtgttttgatgcaagagggcaaagtggtagcttatgcttctaggca 15341985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 16070933 - 16070990
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| |||||| |||||  |  |||||||| ||||||||||||||    
T  16070933 tgggcttaggtggtgttttgatgcgagatgacaaagtggtagcttatgcttctaggca 16070990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 22504215 - 22504139
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22504215 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 22504139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 20343818 - 20343742
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20343818 ctgggcttaggtggtgttttgatgcaagatggtaaggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 20343742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 14885823 - 14885899
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||| ||||||||||    
T  14885823 ctgggcttaggtggtgttctgatgcaagatggtagggtggtagcgtatgcttctaggcagttgcgtattcatgagaa 14885899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 37542213 - 37542289
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||    
T  37542213 ctgggcttaggtggtgttttgatgcaagatggtaaggtggtagcatatgcttctaggcagttacgtgttcatgagaa 37542289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 25849608 - 25849535
Alignment:
Q  165 ggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  25849608 ggcttaggtggcgttttgatgcaagatggtaaggtggtagcatatgcttctaggaaattgcgtgttcatgagaa 25849535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 24797229 - 24797305
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| || ||| ||||||||||    
T  24797229 ctgggcttaggtggtgttctgatgcaagatggtaaggtagtagcgtatgcttctaggcagttacgtattcatgagaa 24797305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 22234753 - 22234810
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  22234753 tgggcttgggtggtgttttgatgcaagatggtaaggtggtagcttatgcttctaggca 22234810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 24619128 - 24619185
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||||||||||||||||| |  |||||||| ||||||||||||||    
T  24619128 tgggcttaggtggtgttctgatgcaagatggcaaagtggtagcttatgcttctaggca 24619185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 24715359 - 24715416
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||||||||||||||||| |  |||||||| ||||||||||||||    
T  24715359 tgggcttaggtggtgttctgatgcaagatggcaaagtggtagcttatgcttctaggca 24715416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 24748387 - 24748444
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||||||||||||||||| |  |||||||| ||||||||||||||    
T  24748387 tgggcttaggtggtgttctgatgcaagatggcaaagtggtagcttatgcttctaggca 24748444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 21679617 - 21679668
Alignment:
Q  169 taggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||| |||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  21679617 tagggggtgttttgatgcaagatggtaaggtggtagcgtatgcttctaggca 21679668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 28893793 - 28893833
Alignment:
Q  181 tgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  28893793 tgatgcaagatggtaaggtggtagcttatgcttctaggcaa 28893833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 28915264 - 28915304
Alignment:
Q  181 tgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  28915264 tgatgcaagatggtaaggtggtagcttatgcttctaggcaa 28915304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 28922619 - 28922659
Alignment:
Q  181 tgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  28922619 tgatgcaagatggtaaggtggtagcttatgcttctaggcaa 28922659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 28930532 - 28930572
Alignment:
Q  181 tgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  28930532 tgatgcaagatggtaaggtggtagcttatgcttctaggcaa 28930572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 17268166 - 17268225
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    ||||| ||||| |||||| | ||||||||||| | ||||||||| |||||||||||||||    
T  17268166 ctgggtttaggaggtgttttaatgcaagatggcaaggtggtagcgtatgcttctaggcaa 17268225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 20777430 - 20777391
Alignment:
Q  181 tgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  20777430 tgatgcaagatggtaaggtggtagcttatgcttctaggca 20777391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 21871886 - 21871941
Alignment:
Q  165 ggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||||||| |||||| ||||||||||||| |  |||||||| ||||||||||||||    
T  21871886 ggcttaggcggtgttttgatgcaagatggcaaagtggtagcttatgcttctaggca 21871941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 21876166 - 21876221
Alignment:
Q  165 ggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||||||| |||||| ||||||||||||| |  |||||||| ||||||||||||||    
T  21876166 ggcttaggcggtgttttgatgcaagatggcaaagtggtagcttatgcttctaggca 21876221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 21338130 - 21338178
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgc 211  Q
    ||||||||||||||||||| ||||||||||| | ||| ||||| |||||    
T  21338130 tgggcttaggtggtgttcttatgcaagatggcaaggtagtagcttatgc 21338178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 22463481 - 22463429
Alignment:
Q  168 ttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||| |||||  ||||||||||||| | ||||||||| ||||||||||||||    
T  22463481 ttaggaggtgtgttgatgcaagatggaaaggtggtagcttatgcttctaggca 22463429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 11205881 - 11205957
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11205881 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 11205957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 3263444 - 3263520
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  3263444 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcgtatgcttctaggcagttgcgtgttcatgagaa 3263520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 29452187 - 29452263
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  29452187 ctgggcttaggtggtgttctgatgcaagatggcaaggtggtagcgtatgcttctaggcaattgcgtgttcatgagaa 29452263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 44660516 - 44660592
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  44660516 ctgggcttgggtggtgttctgatgcaagatggtaaggtggtagcgtatgcttctaggcaattgcgtgttcatgagaa 44660592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 16149332 - 16149260
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    ||||||||||||||||| ||||||||||||| |  |||||||| |||||||||||||| ||| | ||||||||    
T  16149332 tgggcttaggtggtgttttgatgcaagatggaaaagtggtagcttatgcttctaggcagttgagagttcatga 16149260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 16153478 - 16153406
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    ||||||||||||||||| ||||||||||||| |  |||||||| |||||||||||||| ||| | ||||||||    
T  16153478 tgggcttaggtggtgttttgatgcaagatggaaaagtggtagcttatgcttctaggcagttgagagttcatga 16153406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 51605442 - 51605501
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    ||||| ||||| |||||| ||||||||||||| | |||||||||||||||||||||||||    
T  51605442 ctgggtttaggaggtgttttgatgcaagatggcaaggtggtagcatatgcttctaggcaa 51605501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 15247545 - 15247488
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| |||||||||| ||||  |||||||| ||||||||||||||    
T  15247545 tgggcttaggtggtgttttgatgcaagaaggtaaagtggtagcgtatgcttctaggca 15247488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 15357771 - 15357823
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttct 215  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||| |||||||||    
T  15357771 tgggcttaggtggtgttttgatgcaagatcgtaaggtggtagcttatgcttct 15357823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 15002015 - 15002072
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||| ||||||||| |||||||||||||||  |||||||| |||| |||||||||    
T  15002015 tgggcttgggtggtgttttgatgcaagatggtaaagtggtagcttatggttctaggca 15002072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 15071980 - 15071926
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    ||||||||||||||||  ||||||||||||| |  |||||||| |||||||||||    
T  15071980 tgggcttaggtggtgtattgatgcaagatggcaaagtggtagcttatgcttctag 15071926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 1487 - 1563
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  1487 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcatatgcttctaggcaattgcgggttcatgagaa 1563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 27356224 - 27356148
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  27356224 ctgggcttaggtggtgttctgatgcaagatggtaaggtgttagcatatgcttctaggcaattgcgtgttcatgagaa 27356148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 16270317 - 16270393
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||    
T  16270317 ctgggcttaggtggtgttctgatgcaagatggtaagatggtagcatatgcttctaggcaattgcgtgtttatgagaa 16270393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 6605346 - 6605270
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    ||||||||| |||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  6605346 ctgggcttatgtggtgttctgatgcaagatggcaaggtggtagcgtatgcttctaggcaattgcgtgttcatgagaa 6605270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 14566830 - 14566754
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  14566830 ctgggcttaggtggtgtcctgatgcaagatggtaaggtggtagcgtatgcttctaggcagttgcgtgttcatgagaa 14566754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 23656612 - 23656557
Alignment:
Q  165 ggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  23656612 ggcttaggtggtgttttgatgcaagatggtaaggtggtagcatatgcttctaggca 23656557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 20974749 - 20974807
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  20974749 ctgggcttaggtggtgttttgatgcaagatggtaaggtggtagcgtatgcttctaggca 20974807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 29302519 - 29302577
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  29302519 ctgggcttaggtgatgttctgatgcaagatggtaaagtggtagcatatgcttctaggca 29302577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 31415564 - 31415626
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattg 224  Q
    |||||||||||||||||| |||||||||| |||| ||||||||| ||||||| ||||||||||    
T  31415564 ctgggcttaggtggtgttttgatgcaagacggtaaggtggtagcttatgcttataggcaattg 31415626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 31569935 - 31569994
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    ||||| ||||| |||||| ||||||||||||| | |||||||||||||||||||||||||    
T  31569935 ctgggtttaggaggtgttttgatgcaagatggcaaggtggtagcatatgcttctaggcaa 31569994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 20984641 - 20984698
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| ||||||||||||| |  |||||||| ||||||||||||||    
T  20984641 tgggcttaggtggtgttttgatgcaagatggcaaagtggtagcttatgcttctaggca 20984698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 21842102 - 21842048
Alignment:
Q  165 ggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggc 219  Q
    ||||||||||||||  |||||||||||||||  |||||||| |||||||||||||    
T  21842102 ggcttaggtggtgtattgatgcaagatggtaaagtggtagcttatgcttctaggc 21842048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 20009015 - 20009072
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||  ||||||||||||| |  |||||||| ||||||||||||||    
T  20009015 tgggcttaggtggtgtattgatgcaagatggcaaagtggtagcttatgcttctaggca 20009072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 22372618 - 22372561
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| ||||||||||||| |  |||||||| ||||||| ||||||    
T  22372618 tgggcttaggtggtgttttgatgcaagatggcaaagtggtagcttatgcttataggca 22372561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 21324362 - 21324417
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    |||||||||||||||||| ||||||| ||||| | ||| ||||| |||||||||||    
T  21324362 ctgggcttaggtggtgttttgatgcaggatggcaaggtagtagcttatgcttctag 21324417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 19861122 - 19861065
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||  ||||||||||||| |  |||||||| ||| ||||||||||    
T  19861122 tgggcttaggtggtgtattgatgcaagatggcaaagtggtagcttatacttctaggca 19861065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 22052550 - 22052493
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||| ||||||||| |||||||||| || |  |||||||| ||||||||||||||    
T  22052550 tgggcttgggtggtgttttgatgcaagagggcaaagtggtagcttatgcttctaggca 22052493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 19979655 - 19979603
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttc 214  Q
    ||||| ||||||||||| || |||||||||||||  |||||||| ||||||||    
T  19979655 ctgggtttaggtggtgtacttatgcaagatggtaaagtggtagcttatgcttc 19979603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 10384922 - 10384846
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10384922 ctgggcctaggtggtgttctgatgcaagatggtaaggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 10384846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 28755569 - 28755493
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  28755569 ctgggcttaggtggtgttctgatgcaagatggtaaggtagtagcatatgcttctagacaattgcgtgttcatgagaa 28755493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 16328539 - 16328614
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  16328539 tgggcgtaggtggtgttctgatgcaagatggtaaggtggtagcatatgcttctaggcaattgcgggttcatgagaa 16328614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 11960047 - 11960123
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |  ||||||||||    
T  11960047 ctgggcttaggtggtgttctaatgcaagatggtaaggtggtagcatatgcttctaggcaattgaggattcatgagaa 11960123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 47125195 - 47125119
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| || ||| ||||||||||    
T  47125195 ctgggcttaggtggtgttttgatgcaagatggtaaggtggtagcgtatgcttctaggcagttacgtattcatgagaa 47125119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 12359406 - 12359463
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  12359406 tgggcttaggtggtgttttgatgcaagatggtaaagtggtagcatatgcttctaggca 12359463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 12179588 - 12179535
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttcta 216  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  12179588 tgggcttaggtggtgttttgatgcaagatggtaaggtggtagcttatgcttcta 12179535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 16827082 - 16827139
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  16827082 tgggcttaggtggtgttttgatgcaagatggtaaagtggtagcttatgcttctaggca 16827139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 13943275 - 13943216
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    ||||| ||||| |||||| ||||||||||||| | |||||||||||||||||||||||||    
T  13943275 ctgggtttaggaggtgttttgatgcaagatggcaaggtggtagcatatgcttctaggcaa 13943216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 44778498 - 44778439
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    ||||| ||||| |||||| ||||||||||||| | |||||||||||||||||||||||||    
T  44778498 ctgggtttaggaggtgttttgatgcaagatggcaaggtggtagcatatgcttctaggcaa 44778439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 16379806 - 16379864
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||| ||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  16379806 ctgggtttaggaggtgttttgatgcaagatggtaaggtggtagcgtatgcttctaggca 16379864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 16835389 - 16835446
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||| ||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  16835389 tgggtttaggaggtgttttgatgcaagatggtaaggtggtagcgtatgcttctaggca 16835446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 13319383 - 13319438
Alignment:
Q  165 ggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||| ||||||||| ||||||||||||| | ||||||||| ||||||||||||||    
T  13319383 ggcttgggtggtgttttgatgcaagatggcaaggtggtagcttatgcttctaggca 13319438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 14087917 - 14087866
Alignment:
Q  169 taggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||| |||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  14087917 taggaggtgttttgatgcaagatggtaaggtggtagcgtatgcttctaggca 14087866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 41178773 - 41178714
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    ||||| ||||| |||||| ||||||||||||| | ||||||||| |||||||||||||||    
T  41178773 ctgggtttaggaggtgttttgatgcaagatggcaaggtggtagcttatgcttctaggcaa 41178714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 13971005 - 13971056
Alignment:
Q  169 taggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||| |||||| ||||||||||||||| ||| ||||| ||||||||||||||    
T  13971005 taggaggtgttttgatgcaagatggtaaggttgtagcgtatgcttctaggca 13971056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 15228899 - 15228848
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttc 214  Q
    |||||||||||||||| || ||||||||||||| ||| ||||| ||||||||    
T  15228899 tgggcttaggtggtgtgcttatgcaagatggtaaggtagtagcttatgcttc 15228848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 15234767 - 15234716
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttc 214  Q
    |||||||||||||||| || ||||||||||||| ||| ||||| ||||||||    
T  15234767 tgggcttaggtggtgtgcttatgcaagatggtaaggtagtagcttatgcttc 15234716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 18133233 - 18133279
Alignment:
Q  171 ggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    ||||||||| ||||||||||||||| |||||| || |||||||||||    
T  18133233 ggtggtgttttgatgcaagatggtaaggtggttgcgtatgcttctag 18133279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 31694073 - 31694119
Alignment:
Q  171 ggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    ||||||||| ||||||||||||||| ||||||||| ||||| |||||    
T  31694073 ggtggtgttttgatgcaagatggtaaggtggtagcgtatgcatctag 31694119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 31940145 - 31940099
Alignment:
Q  171 ggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    ||||||||| ||||||||||||||| ||||||||| ||||| |||||    
T  31940145 ggtggtgttttgatgcaagatggtaaggtggtagcgtatgcatctag 31940099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 10418942 - 10418978
Alignment:
Q  181 tgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  10418942 tgatgcaagatggtaaggtggtagcttatgcttctag 10418978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 5e-31; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 20296049 - 20295973
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  20296049 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcatatgcttctcggcaattgcgtgttcatgagaa 20295973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 52987408 - 52987333
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  52987408 tgggcttaggtggtgttctaatgcaagatggtaaggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 52987333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 21952546 - 21952470
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||    
T  21952546 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcatatgcttctaggcaattgcgggttcttgagaa 21952470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 37678717 - 37678641
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  37678717 ctgggcttaggtggtgttctgatgcaagatggcaaggtggtagcgtatgcttctaggcaattgcgtgttcatgagaa 37678641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 31538719 - 31538795
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||    
T  31538719 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcgtatgcttctaggcagttacgtgttcatgagaa 31538795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 20834622 - 20834680
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  20834622 ctgggcttaggtggtgttttgatgcaagatggtaaggtggtagcgtatgcttctaggca 20834680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 24098325 - 24098387
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattg 224  Q
    ||||| |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  24098325 ctgggattaggtggtgttttgatgcaagatggtaaggtggtagcttatgcttctaggcaattg 24098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 19855941 - 19855884
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  19855941 tgggcttaggtggtgttttgatgcaagatggtaaggtggtagcgtatgcttctaggca 19855884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 20938786 - 20938843
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||    
T  20938786 tgggcttaggtggtgttttgatgcaagatggtaaggtagtagcttatgcttctaggca 20938843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 48424541 - 48424489
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttc 214  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  48424541 ctgggcttaggtggtgttttgatgcaagatggtaaggtggtagcgtatgcttc 48424489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 21744275 - 21744332
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| ||||||||||||| |  |||||||| ||||||||||||||    
T  21744275 tgggcttaggtggtgttttgatgcaagatggcaaagtggtagcgtatgcttctaggca 21744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 19661859 - 19661915
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggc 219  Q
    |||||||||||| |||| | ||||||||||||| ||||||||| |||||||||||||    
T  19661859 tgggcttaggtgttgttttaatgcaagatggtaaggtggtagcgtatgcttctaggc 19661915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 20060681 - 20060729
Alignment:
Q  169 taggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    |||| |||||| ||||||||||||||| ||| ||||| |||||||||||    
T  20060681 taggaggtgttttgatgcaagatggtagggtagtagcgtatgcttctag 20060729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1715 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1715
Description:

Target: scaffold1715; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 615 - 539
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  615 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcatatgcttctaggcaattgcgggtacatgagaa 539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 28586 - 28510
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  28586 ctgggcttaggtggtgttctgatgcaagatgataaggtagtagcatatgcttctaggcaattgcgtgttcatgagaa 28510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 40986 - 41062
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  40986 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcgtatgcttctaggcagttgcgtgttcatgagaa 41062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 46044 - 46107
Alignment:
Q  154 catcaaaactgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    |||| ||| ||||||| ||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  46044 catctaaattgggcttgggtggtgttttgatgcaagatggtaaggtggtagcgtatgcttctag 46107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 24365898 - 24365822
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  24365898 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcgtatgcttctaggcagttgcgtgttcatgagaa 24365822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 10467644 - 10467702
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10467644 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcatatgcttctaggca 10467702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 5296002 - 5296059
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||||||||||||||||| |  |||||||| ||||||||||||||    
T  5296002 tgggcttaggtggtgttctgatgcaagatggcaaagtggtagcttatgcttctaggca 5296059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 28281608 - 28281667
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    ||||| ||||| |||||| ||||||||||||| | |||||||||||| ||||||||||||    
T  28281608 ctgggtttaggaggtgttttgatgcaagatggcaaggtggtagcataggcttctaggcaa 28281667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 19436487 - 19436430
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||||||||| |||||| ||||||||||||| |  |||||||| ||||||||||||||    
T  19436487 tgggcttaggcggtgttttgatgcaagatggcaaagtggtagcttatgcttctaggca 19436430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 21473086 - 21473029
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||  ||||||||||||| |  |||||||| ||||||||||||||    
T  21473086 tgggcttaggtggtgtattgatgcaagatggcaaagtggtagcttatgcttctaggca 21473029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 15460803 - 15460749
Alignment:
Q  181 tgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    ||||||||||||||| ||||||||| ||||||||||| ||| || | ||||||||    
T  15460803 tgatgcaagatggtaaggtggtagcttatgcttctagacaactgagggttcatga 15460749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 18796164 - 18796118
Alignment:
Q  174 ggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||||| ||||||||||||||| ||| ||||| ||||||||||||||    
T  18796164 ggtgttttgatgcaagatggtaaggtagtagcgtatgcttctaggca 18796118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 19880787 - 19880729
Alignment:
Q  159 aaactgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    ||||||||  |||| |||||  ||||||||||||||| ||||||||| |||||||||||    
T  19880787 aaactgggtctaggaggtgtgttgatgcaagatggtaaggtggtagcgtatgcttctag 19880729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 20829508 - 20829436
Alignment:
Q  166 gcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  20829508 gcttaggtggtgttctgatgcaagatggcaaggtggtagcgtatgcttctaggcaattgcgtgttcatgagaa 20829436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 1065004 - 1064928
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||||| ||||||||    
T  1065004 ctgggcttaggtggtgttctgatgcaagatggtaaggtagtagcgtatgcttctaggcagttgcgtgtacatgagaa 1064928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 31831911 - 31831835
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| || ||| ||||||||||    
T  31831911 ctgggcttaggtggtgttttgatgcaagatggtaaggtggtagcgtatgcttctaggcagttacgtattcatgagaa 31831835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 23278028 - 23277956
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||| ||| | ||||||||    
T  23278028 tgggcttaggtggtgttttgatgcaagatggcaaggtggtagcatatgcttctaggcagttgagagttcatga 23277956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 19718207 - 19718263
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctagg 218  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  19718207 ctgggcttaggtggtgttttgatgcaagatggtaaggtggtagcttatgcttctagg 19718263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 12575606 - 12575547
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    ||||| ||||| |||||| ||||||||||||| | |||||||||||||||||||||||||    
T  12575606 ctgggtttaggaggtgttttgatgcaagatggcaaggtggtagcatatgcttctaggcaa 12575547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 24949834 - 24949770
Alignment:
Q  171 ggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    ||||||||| |||||||||| |||| ||||||||| |||||||||||||| ||| | ||||||||    
T  24949834 ggtggtgttttgatgcaagacggtaaggtggtagcgtatgcttctaggcagttgagggttcatga 24949770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 27788981 - 27788934
Alignment:
Q  174 ggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaa 221  Q
    |||||| ||||||||||||| | |||||||||||||||||||||||||    
T  27788981 ggtgttttgatgcaagatggcaaggtggtagcatatgcttctaggcaa 27788934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 19651241 - 19651295
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    ||||||| ||||||||| ||||||||||||||| ||| ||||| |||||||||||    
T  19651241 tgggcttgggtggtgttttgatgcaagatggtaaggttgtagcgtatgcttctag 19651295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 23295187 - 23295130
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||| ||||||||| |||||||||||| || ||| ||||| ||||||||||||||    
T  23295187 tgggcttgggtggtgttttgatgcaagatgttaaggtagtagcgtatgcttctaggca 23295130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 25264306 - 25264249
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||||||||||||| || | |||||||||||||  |||||||| ||||||||||||||    
T  25264306 tgggcttaggtggtattttaatgcaagatggtaaagtggtagcttatgcttctaggca 25264249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 23111988 - 23111937
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttc 214  Q
    |||||||||||||||| || ||||||||||| | ||||||||| ||||||||    
T  23111988 tgggcttaggtggtgtccttatgcaagatggcaaggtggtagcttatgcttc 23111937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 27209368 - 27209418
Alignment:
Q  168 ttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctagg 218  Q
    |||||||||||  ||||||||||||| | ||||||||| ||||||||||||    
T  27209368 ttaggtggtgtgttgatgcaagatggcaaggtggtagcttatgcttctagg 27209418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 6798 - 6874
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |  ||||||||||    
T  6798 ctgggcttaggtggtgttctgatgcaagatggtaaggtggtagcatatgcttctaggcagttgaggattcatgagaa 6874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 15367 - 15435
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttc 231  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||    
T  15367 tgggcttaggtggtgttctgatgcaagattgtaaggtggtagcgtatgcttctaggcagttgcgtgttc 15435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 250266 - 250208
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  250266 ctgggcttaggtggtgttttgatgcaagatggtaaggtggtagcatatgcttctaggca 250208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 13852 - 13780
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| ||| | ||||||||    
T  13852 tgggcttaggtggtgttttgatgcaagatggtaaggtggtagcttatgcttctaggcagttgagagttcatga 13780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0742 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 6866 - 6808
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  6866 ctgggcttaggaggtgttctgatgcaagatggcaaggtggtagcatatgcttctaggca 6808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 11439 - 11497
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  11439 ctgggcttaggaggtgttctgatgcaagatggcaaggtggtagcatatgcttctaggca 11497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 4989 - 5047
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  4989 ctgggcttaggaggtgttctgatgcaagatggcaaggtggtagcatatgcttctaggca 5047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 21635 - 21578
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  21635 tgggcttaggtggtgttttgatgcaagatggtaaggtggtagcttatgcttctaggca 21578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 10711 - 10783
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    |||||| |||||||||| ||||||||||||| |  |||  |||||||||||||||||| ||| | ||||||||    
T  10711 tgggctcaggtggtgttttgatgcaagatggcaaagtgtaagcatatgcttctaggcagttgagagttcatga 10783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 14481 - 14553
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    |||||| |||||||||| ||||||||||||| |  |||  |||||||||||||||||| ||| | ||||||||    
T  14481 tgggctcaggtggtgttttgatgcaagatggcaaagtgtaagcatatgcttctaggcagttgagagttcatga 14553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 80482 - 80543
Alignment:
Q  159 aaactgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||||||||||||| |||||||||||||||||||| | ||||||||| ||||||||||||||    
T  80482 aaactgggcttaggaggtgttctgatgcaagatggaaaggtggtagcttatgcttctaggca 80543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 109282 - 109225
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  109282 tgggcttaggtggtgttttgatgcaagatggtaaggtggtagcttatgcttctaggca 109225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 55644 - 55720
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    ||||| |||||||||||  | |||||||||||||  |||||||| |||||||| || || ||| | |||||||||||    
T  55644 ctgggtttaggtggtgtatttatgcaagatggtaaagtggtagcttatgcttcaagacagttgagagttcatgagaa 55720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 2141 - 2196
Alignment:
Q  165 ggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  2141 ggcttaggtggtgttttgatgcaagatggtaaggtggtagcttatgcttctaggca 2196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 342 - 413
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatg 234  Q
    ||||||||||||||||| |||||||||||||||  |||||||| |||||||||||||| ||| | |||||||    
T  342 tgggcttaggtggtgttttgatgcaagatggtaaagtggtagcttatgcttctaggcagttgagagttcatg 413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 10542 - 10600
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||| |||||||| ||||||||||| | ||||||||||||||||||||||||    
T  10542 ctgggcttaggaggtgttctaatgcaagatggcaaggtggtagcatatgcttctaggca 10600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 31972 - 32026
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttcta 216  Q
    ||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  31972 ctgggtttaggtggtgttttgatgcaagatggtaaggtggtagcatatgcttcta 32026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 6006 - 6060
Alignment:
Q  166 gcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  6006 gcttaggtggtgttttgatgcaagatggtaaggtggtagcttatgcttctaggca 6060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 10437 - 10491
Alignment:
Q  166 gcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  10437 gcttaggtggtgttttgatgcaagatggtaaggtggtagcttatgcttctaggca 10491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 44436 - 44378
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||||||    
T  44436 ctgggcttaggtggtcttttgatgcaagatggtaaggtggtagcttatgcttctaggca 44378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 324356 - 324302
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  324356 tgggcttaggtggtgttttgatgcaagatggtaaggtggtagcgtatgcttctag 324302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 35122 - 35065
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||    
T  35122 tgggcttaggtggtgttttgatgcaagatggtaaggtagtagcttatgcttctaggca 35065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 33063 - 33006
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  33063 tgggcttaggtggtgttttgatgcaagatggtaaagtggtagcttatgcttctaggca 33006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 50529 - 50586
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  50529 tgggcttaggtggtgttttgatgcaagatggtaaagtggtagcttatgcttctaggca 50586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1830 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1830
Description:

Target: scaffold1830; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 646 - 574
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    ||||||||||||||||| ||||||||||||| |  |||||||| |||||||||||||| ||| || |||||||    
T  646 tgggcttaggtggtgttttgatgcaagatggcaaagtggtagcgtatgcttctaggcagttgagttttcatga 574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 3607 - 3679
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||| ||||||| |||||| ||| | ||||||||    
T  3607 tgggcttgggtggtgttttgatgcaagatggtaaggtggtagcgtatgcttttaggcagttgagagttcatga 3679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 21540 - 21485
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    ||||||||||| |||||||| ||||||||||| | |||||||||||||||||||||    
T  21540 ctgggcttaggaggtgttcttatgcaagatggcaaggtggtagcatatgcttctag 21485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 4401 - 4346
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctagg 218  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||| |||||||    
T  4401 tgggcttaggtggtgttttgatgcaagatggtaaggtggtagcttatgtttctagg 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1646 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1646
Description:

Target: scaffold1646; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 977 - 919
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||| ||||| |||||||||||||||||||| | ||||||||| ||||||||||||||    
T  977 ctgggtttaggaggtgttctgatgcaagatggcaaggtggtagcgtatgcttctaggca 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 55553 - 55611
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||| |||||| |||||||||||||||  |||||||| ||||||||||||||    
T  55553 ctgggcttaggaggtgttttgatgcaagatggtaaagtggtagcttatgcttctaggca 55611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 32337 - 32388
Alignment:
Q  169 taggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||| |||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  32337 taggaggtgttttgatgcaagatggtaaggtggtagcgtatgcttctaggca 32388  T

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Target: scaffold0266 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 15764 - 15707
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| |||||||||||||||  |||||||| |||| |||||||||    
T  15764 tgggcttaggtggtgttttgatgcaagatggtaaagtggtagcttatgattctaggca 15707  T

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Target: scaffold0104 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 23866 - 23809
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| ||||||||||||| |  |||||||| ||||||||||||||    
T  23866 tgggcttaggtggtgttttgatgcaagatggcaaagtggtagcttatgcttctaggca 23809  T

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Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 47688 - 47745
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| ||||||||||||| |  |||||||| ||||||||||||||    
T  47688 tgggcttaggtggtgttttgatgcaagatggcaaagtggtagcgtatgcttctaggca 47745  T

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Target: scaffold0053; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 56501 - 56555
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    ||||||| ||||||||| ||||||||||||| |  |||||||| |||||||||||    
T  56501 tgggcttgggtggtgttttgatgcaagatggcaaagtggtagcttatgcttctag 56555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 100216 - 100273
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| ||||||||||||| |  |||||||| ||||||||||||||    
T  100216 tgggcttaggtggtgttttgatgcaagatggcaaagtggtagcttatgcttctaggca 100273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 194358 - 194415
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||| ||||||||| ||||||||||||||| ||| ||||| ||||||||||||||    
T  194358 tgggcttgggtggtgttttgatgcaagatggtaaggtagtagcttatgcttctaggca 194415  T

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Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 150221 - 150149
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    ||||||| ||||||||| ||||||||||||| |  |||||||  |||||||||||||||||| | ||||||||    
T  150221 tgggcttgggtggtgttttgatgcaagatggcaaagtggtagtgtatgcttctaggcaattgagagttcatga 150149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 627 - 699
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    ||||||||||||||||| ||||||||||||| |  ||| |||| |||||||||||||| ||| | ||||||||    
T  627 tgggcttaggtggtgttttgatgcaagatggcaaagtgctagcgtatgcttctaggcagttgagggttcatga 699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 12953 - 13025
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    ||||||| ||||||||| ||||||||||||| | | ||||||| |||||||||||||| ||| | ||||||||    
T  12953 tgggcttgggtggtgttttgatgcaagatggcaagatggtagcttatgcttctaggcagttgagagttcatga 13025  T

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Target: scaffold0126 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 42569 - 42497
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    ||||||| ||||||||| ||||||||||||| | ||| ||||| |||||||||||||| ||| | ||||||||    
T  42569 tgggcttgggtggtgttttgatgcaagatggaaaggtagtagcttatgcttctaggcagttgagagttcatga 42497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 20231 - 20303
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    |||||||||| |||||| |||||||||| ||||  |||||||| |||||||||||||| ||| | ||||||||    
T  20231 tgggcttaggcggtgttttgatgcaagacggtaaagtggtagcgtatgcttctaggcagttgagagttcatga 20303  T

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Target: scaffold0751 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 3828 - 3773
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctagg 218  Q
    ||||||||||||||||| ||||||| ||||| | ||||||||| ||||||||||||    
T  3828 tgggcttaggtggtgttttgatgcatgatggcaaggtggtagcttatgcttctagg 3773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 6402 - 6327
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    ||||||||||||||||| ||||||||||||| |  |||||||| ||| |||||||||| ||| |  ||||||||||    
T  6402 tgggcttaggtggtgttttgatgcaagatggcaaagtggtagcttatacttctaggcagttgaggattcatgagaa 6327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 114205 - 114154
Alignment:
Q  169 taggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||| |||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  114205 taggaggtgttttgatgcaagatggtaaggtggtagcgtatgcttctaggca 114154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 1511 - 1565
Alignment:
Q  166 gcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||| |||||| |||||||||||||||  |||||||| ||||||||||||||    
T  1511 gcttaggcggtgttttgatgcaagatggtaaagtggtagcttatgcttctaggca 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 5892 - 5946
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    ||||||| ||||||||| ||||||||||||||| ||| ||||| |||||||||||    
T  5892 tgggcttgggtggtgttttgatgcaagatggtaaggtagtagcgtatgcttctag 5946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 8710 - 8656
Alignment:
Q  166 gcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||| ||||||||| ||||||||||||||| ||| ||||| ||||||||||||||    
T  8710 gcttgggtggtgttttgatgcaagatggtaaggtcgtagcgtatgcttctaggca 8656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 2009 - 2062
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttcta 216  Q
    ||||||||||||||||| |||||||| |||| | ||||||| | ||||||||||    
T  2009 tgggcttaggtggtgttttgatgcaaaatggcaaggtggtatcttatgcttcta 2062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 20502 - 20444
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||| ||||| |||||| ||||||| ||||||| ||||||||| ||||||||||||||    
T  20502 ctgggtttaggaggtgttttgatgcaggatggtaaggtggtagcgtatgcttctaggca 20444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 24664 - 24606
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||| ||||| |||||| ||||||| ||||||| ||||||||| ||||||||||||||    
T  24664 ctgggtttaggaggtgttttgatgcaggatggtaaggtggtagcgtatgcttctaggca 24606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2112 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold2112
Description:

Target: scaffold2112; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 630 - 573
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| ||||||||||||| |  |||||||| ||||||||| ||||    
T  630 tgggcttaggtggtgttttgatgcaagatggcaaagtggtagcttatgcttctgggca 573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 5428 - 5371
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| |||||||||||| ||  |||||||| ||| ||||||||||    
T  5428 tgggcttaggtggtgttttgatgcaagatgttaaagtggtagcttattcttctaggca 5371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 1521 - 1464
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||| |||||||||||| ||||||||||||| |  |||||||| ||||||||||||||    
T  1521 tgggtttaggtggtgttttgatgcaagatggcaaagtggtagcttatgcttctaggca 1464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 190 - 133
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||| |||||||||||| ||||||||||||| |  |||||||| ||||||||||||||    
T  190 tgggtttaggtggtgttttgatgcaagatggcaaagtggtagcttatgcttctaggca 133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 13993 - 14050
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| |||||||||||||||    |||||| ||||||||||||||    
T  13993 tgggcttaggtggtgttttgatgcaagatggtaaaccggtagcttatgcttctaggca 14050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 22172 - 22229
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| |||||||||||||||    |||||| ||||||||||||||    
T  22172 tgggcttaggtggtgttttgatgcaagatggtaaaccggtagcttatgcttctaggca 22229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 206 - 263
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||| |||||||||  ||||||||||||||  |||||||| ||||||||||||||    
T  206 tgggcttgggtggtgtttcgatgcaagatggtaaagtggtagcttatgcttctaggca 263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 48756 - 48699
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| |||| |||||||||| ||| ||||  ||||||||||||||    
T  48756 tgggcttaggtggtgttttgatccaagatggtaaggtagtagtctatgcttctaggca 48699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 28276 - 28219
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||||||||||||| || | |||||||||||||  |||||||| ||||||||||||||    
T  28276 tgggcttaggtggtttttttatgcaagatggtaaagtggtagcttatgcttctaggca 28219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 50462 - 50405
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||| ||||| ||||||||||||| |  |||||||| ||||||||||||||    
T  50462 tgggcttaggtagtgttttgatgcaagatggcaaagtggtagcttatgcttctaggca 50405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 10111 - 10171
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaatt 223  Q
    ||||||| ||||||||| ||||||||||||| | ||| ||||| ||||||||||| |||||    
T  10111 tgggcttgggtggtgttttgatgcaagatggcaaggtagtagcttatgcttctagacaatt 10171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 20325 - 20385
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaatt 223  Q
    ||||||| ||||||||| ||||||||||||| | ||| ||||| ||||||||||| |||||    
T  20325 tgggcttgggtggtgttttgatgcaagatggcaaggtagtagcttatgcttctagacaatt 20385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 35765 - 35693
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatga 235  Q
    ||||||||||||||||| ||||||||||||| |  ||| |||| ||||||||||| || ||| | ||||||||    
T  35765 tgggcttaggtggtgttttgatgcaagatggcaaagtgatagcgtatgcttctagacagttgagagttcatga 35693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 3846 - 3771
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||| ||||||||||| || |||||||||||||  |||||||| |||||||| || || ||| | |||||||||||    
T  3846 tgggtttaggtggtgtacttatgcaagatggtaaagtggtagcttatgcttcaagacagttgagagttcatgagaa 3771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 29225 - 29300
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||| ||||||||||| || |||||||||||||  |||||||| |||||||| ||| | ||| | |||||||||||    
T  29225 tgggtttaggtggtgtccttatgcaagatggtaaagtggtagcttatgcttcaaggtagttgagagttcatgagaa 29300  T

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Target: scaffold0165 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 6082 - 6027
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctagg 218  Q
    ||||||||||||||||| ||||||||||||| |  |||| ||| ||||||||||||    
T  6082 tgggcttaggtggtgttttgatgcaagatggcaaagtggcagcttatgcttctagg 6027  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 49174 - 49225
Alignment:
Q  169 taggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    |||| |||||| ||||||||||||| | ||||||||| ||||||||||||||    
T  49174 taggaggtgttttgatgcaagatggaaaggtggtagcgtatgcttctaggca 49225  T

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Target: scaffold0017 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 196141 - 196216
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    |||| ||||||||||| || ||||||||||||   |||||||| |||||||| ||||| ||| | |||||||||||    
T  196141 tgggtttaggtggtgtgcttatgcaagatggtcaagtggtagcttatgcttcgaggcagttgagagttcatgagaa 196216  T

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Target: scaffold0244 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 19001 - 18947
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctag 217  Q
    ||||||||||||||||| |||||||||||||||   | ||||| |||||||||||    
T  19001 tgggcttaggtggtgttttgatgcaagatggtaaattagtagcttatgcttctag 18947  T

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Target: scaffold0234 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 23733 - 23775
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagc 205  Q
    |||||||||||||||| || ||||||||||||| |||||||||    
T  23733 tgggcttaggtggtgtgcttatgcaagatggtaaggtggtagc 23775  T

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Target: scaffold0192 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 28177 - 28119
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggt-agcatatgcttctaggca 220  Q
    ||||||||||||||||  ||||||||||||| | |||||| ||| ||||||||||||||    
T  28177 tgggcttaggtggtgtattgatgcaagatggcaaggtggtaagcttatgcttctaggca 28119  T

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Target: scaffold0865 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 2926 - 2983
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||  ||||||||||||| |  || ||||| ||||||||||||||    
T  2926 tgggcttaggtggtgtattgatgcaagatggcaaagtagtagcttatgcttctaggca 2983  T

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Target: scaffold0509 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 1852 - 1791
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattg 224  Q
    |||||||||||||||| || ||||||||||| |  |||||||| |||||||| || ||||||    
T  1852 tgggcttaggtggtgtacttatgcaagatggcaaagtggtagcttatgcttcgagacaattg 1791  T

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Target: scaffold0509; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 8280 - 8219
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattg 224  Q
    |||||||||||||||| || ||||||||||| |  |||||||| |||||||| || ||||||    
T  8280 tgggcttaggtggtgtacttatgcaagatggcaaagtggtagcttatgcttcgagacaattg 8219  T

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Target: scaffold0309 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 11445 - 11388
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||| |||||||||| || |  |||||||| ||| ||||||||||    
T  11445 tgggcttaggtggtgttttgatgcaagaaggcaaagtggtagcttatacttctaggca 11388  T

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Target: scaffold0133 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 29939 - 29996
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||||||||||||  ||||||||||||| |  || ||||| ||||||||||||||    
T  29939 tgggcttaggtggtgtattgatgcaagatggcaaagtagtagcttatgcttctaggca 29996  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 38601 - 38662
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaatt 223  Q
    ||||| ||||||||||| || |||||||||||||  |||||||| |||||||| || |||||    
T  38601 ctgggtttaggtggtgtgcttatgcaagatggtaaagtggtagcttatgcttcgagacaatt 38662  T

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Target: scaffold0064 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 39414 - 39475
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattg 224  Q
    |||||||||||||||| || ||||||||||| | |||||||||  ||||||| || ||||||    
T  39414 tgggcttaggtggtgtgcttatgcaagatggcaaggtggtagctgatgcttcgagacaattg 39475  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 194898 - 194841
Alignment:
Q  163 tgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggca 220  Q
    ||||||| ||||||||| |||||||||| || |  |||||||| ||||||||||||||    
T  194898 tgggcttcggtggtgttttgatgcaagagggcaaagtggtagcttatgcttctaggca 194841  T

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Target: scaffold0894 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 3579 - 3503
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctaggcaattgcgtgttcatgagaa 238  Q
    ||||| ||||||||||| || |||||||||||||  || ||||| |||||||| || |||||| |  ||||||||||    
T  3579 ctgggtttaggtggtgtgcttatgcaagatggtaaagtagtagcttatgcttcgagacaattgagaattcatgagaa 3503  T

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Target: scaffold0420 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 299 - 243
Alignment:
Q  162 ctgggcttaggtggtgttctgatgcaagatggtacggtggtagcatatgcttctagg 218  Q
    ||||||||||| |||||| |||| |||||||| |  |||||||| ||||||||||||    
T  299 ctgggcttaggaggtgttttgattcaagatggcaaagtggtagcttatgcttctagg 243  T

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