View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1051_low_4 (Length: 365)

Name: NF1051_low_4
Description: NF1051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1051_low_4
NF1051_low_4
[»] chr3 (35 HSPs)
chr3 (15-313)||(19975800-19976093)
chr3 (234-311)||(33983013-33983090)
chr3 (234-302)||(6888731-6888799)
chr3 (234-303)||(27969502-27969571)
chr3 (186-313)||(21075847-21075974)
chr3 (186-313)||(27877546-27877673)
chr3 (186-313)||(43746242-43746370)
chr3 (209-264)||(10267898-10267953)
chr3 (186-305)||(21389771-21389890)
chr3 (186-313)||(46311878-46312005)
chr3 (234-313)||(50737950-50738029)
chr3 (234-313)||(50774825-50774904)
chr3 (246-303)||(42854312-42854369)
chr3 (212-313)||(46219118-46219219)
chr3 (218-313)||(2869025-2869120)
chr3 (193-302)||(7910145-7910254)
chr3 (193-264)||(9301047-9301118)
chr3 (193-264)||(26823077-26823148)
chr3 (193-264)||(32774428-32774499)
chr3 (213-264)||(43088028-43088079)
chr3 (193-264)||(54313332-54313403)
chr3 (213-279)||(29522805-29522871)
chr3 (193-302)||(31412121-31412229)
chr3 (193-302)||(41933298-41933407)
chr3 (228-270)||(43736046-43736088)
chr3 (193-302)||(55423737-55423846)
chr3 (213-262)||(1842599-1842648)
chr3 (213-264)||(3995087-3995138)
chr3 (213-302)||(7399722-7399812)
chr3 (213-264)||(10804543-10804594)
chr3 (193-264)||(17525307-17525378)
chr3 (193-264)||(26898277-26898348)
chr3 (193-264)||(50155531-50155602)
chr3 (193-302)||(1694999-1695108)
chr3 (209-302)||(15489101-15489194)
[»] chr7 (33 HSPs)
chr7 (15-312)||(7505258-7505535)
chr7 (15-176)||(31271936-31272097)
chr7 (231-313)||(31272123-31272205)
chr7 (234-303)||(47381487-47381556)
chr7 (235-303)||(33604585-33604653)
chr7 (213-301)||(35709925-35710013)
chr7 (186-313)||(23025182-23025309)
chr7 (212-313)||(1873656-1873757)
chr7 (186-313)||(39494005-39494133)
chr7 (193-302)||(8613774-8613883)
chr7 (213-302)||(47761690-47761779)
chr7 (212-313)||(16526208-16526309)
chr7 (186-313)||(10993206-10993334)
chr7 (193-264)||(32795773-32795844)
chr7 (193-264)||(34202642-34202713)
chr7 (193-264)||(37471505-37471576)
chr7 (193-302)||(24764212-24764321)
chr7 (193-302)||(39560526-39560635)
chr7 (193-264)||(30072084-30072155)
chr7 (209-264)||(33590275-33590330)
chr7 (193-276)||(47099201-47099284)
chr7 (218-281)||(49112590-49112653)
chr7 (213-279)||(13598117-13598183)
chr7 (234-276)||(17511311-17511353)
chr7 (234-276)||(17541861-17541903)
chr7 (226-264)||(35710647-35710685)
chr7 (210-264)||(36643395-36643449)
chr7 (204-281)||(17475716-17475793)
chr7 (204-281)||(17577421-17577498)
chr7 (227-264)||(34182087-34182124)
chr7 (234-311)||(41200245-41200322)
chr7 (233-313)||(2621446-2621526)
chr7 (220-260)||(31271507-31271547)
[»] chr4 (41 HSPs)
chr4 (40-313)||(19240790-19241048)
chr4 (190-313)||(44341214-44341337)
chr4 (193-313)||(32767602-32767722)
chr4 (234-313)||(43286269-43286348)
chr4 (248-313)||(3415234-3415299)
chr4 (186-313)||(20034257-20034384)
chr4 (234-313)||(52464103-52464182)
chr4 (186-313)||(39345852-39345980)
chr4 (235-313)||(2323804-2323882)
chr4 (235-313)||(27870043-27870121)
chr4 (212-313)||(45522521-45522622)
chr4 (212-313)||(47295585-47295686)
chr4 (212-313)||(54134477-54134578)
chr4 (193-313)||(9455303-9455423)
chr4 (186-313)||(17543768-17543896)
chr4 (233-313)||(32594064-32594144)
chr4 (219-313)||(951394-951488)
chr4 (219-313)||(1705199-1705292)
chr4 (193-302)||(15194500-15194609)
chr4 (193-302)||(56264393-56264502)
chr4 (234-303)||(34030327-34030396)
chr4 (241-313)||(1324942-1325014)
chr4 (233-313)||(34859066-34859146)
chr4 (193-264)||(40731191-40731262)
chr4 (193-264)||(54093976-54094047)
chr4 (193-302)||(401347-401456)
chr4 (193-302)||(26706897-26707006)
chr4 (193-302)||(35666604-35666713)
chr4 (234-302)||(51401349-51401417)
chr4 (213-264)||(6643303-6643354)
chr4 (213-264)||(16623521-16623572)
chr4 (213-264)||(19823653-19823704)
chr4 (213-264)||(24678331-24678382)
chr4 (193-264)||(39240414-39240485)
chr4 (193-264)||(51435564-51435635)
chr4 (193-264)||(56114183-56114254)
chr4 (193-279)||(50097439-50097525)
chr4 (193-302)||(53724884-53724993)
chr4 (213-302)||(53925363-53925452)
chr4 (250-299)||(41361292-41361341)
chr4 (227-263)||(32594851-32594887)
[»] chr6 (27 HSPs)
chr6 (15-176)||(27966567-27966722)
chr6 (213-305)||(27966740-27966832)
chr6 (234-313)||(20139234-20139313)
chr6 (234-313)||(22193556-22193635)
chr6 (190-313)||(31472452-31472575)
chr6 (212-313)||(15065947-15066048)
chr6 (193-302)||(2067165-2067274)
chr6 (235-313)||(10997760-10997838)
chr6 (244-313)||(3044299-3044368)
chr6 (244-313)||(12272226-12272295)
chr6 (193-302)||(17869230-17869339)
chr6 (193-264)||(22988151-22988222)
chr6 (193-264)||(23800174-23800245)
chr6 (193-302)||(2702977-2703086)
chr6 (212-313)||(11369564-11369666)
chr6 (213-302)||(26555218-26555307)
chr6 (213-302)||(29641046-29641135)
chr6 (215-264)||(4170937-4170986)
chr6 (226-302)||(31511238-31511314)
chr6 (213-277)||(13835967-13836031)
chr6 (234-305)||(32465657-32465729)
chr6 (213-260)||(17547561-17547608)
chr6 (219-302)||(31655523-31655606)
chr6 (193-302)||(9035080-9035189)
chr6 (226-264)||(15068034-15068072)
chr6 (213-302)||(15183747-15183836)
chr6 (244-302)||(17879033-17879091)
[»] chr2 (31 HSPs)
chr2 (193-313)||(15614122-15614242)
chr2 (186-313)||(38838004-38838131)
chr2 (226-313)||(5271092-5271179)
chr2 (186-313)||(15560532-15560659)
chr2 (193-314)||(4564937-4565057)
chr2 (213-313)||(25096324-25096424)
chr2 (233-313)||(42730728-42730807)
chr2 (233-288)||(20922773-20922828)
chr2 (186-313)||(29201372-29201499)
chr2 (235-313)||(21747437-21747515)
chr2 (234-313)||(9470844-9470923)
chr2 (186-313)||(40000753-40000879)
chr2 (186-313)||(40861001-40861128)
chr2 (212-305)||(26556474-26556568)
chr2 (193-302)||(27495903-27496012)
chr2 (213-264)||(1002507-1002558)
chr2 (193-302)||(1346260-1346369)
chr2 (213-302)||(2650090-2650179)
chr2 (234-312)||(17920808-17920886)
chr2 (213-302)||(35439538-35439627)
chr2 (215-264)||(13247786-13247835)
chr2 (216-264)||(30801211-30801259)
chr2 (213-264)||(28222971-28223022)
chr2 (193-264)||(36240734-36240805)
chr2 (193-302)||(10261329-10261438)
chr2 (193-302)||(10440160-10440269)
chr2 (263-313)||(17071256-17071306)
chr2 (263-313)||(17077328-17077378)
chr2 (193-302)||(31742899-31743008)
chr2 (227-265)||(42730064-42730102)
chr2 (226-279)||(18258065-18258118)
[»] chr5 (36 HSPs)
chr5 (186-313)||(38976205-38976332)
chr5 (186-313)||(37205995-37206122)
chr5 (218-301)||(33908117-33908200)
chr5 (202-276)||(31230310-31230384)
chr5 (205-313)||(35038728-35038836)
chr5 (186-313)||(6955748-6955875)
chr5 (186-313)||(9996260-9996387)
chr5 (186-313)||(38355982-38356109)
chr5 (212-313)||(21731734-21731835)
chr5 (186-313)||(6238202-6238330)
chr5 (186-313)||(6899912-6900040)
chr5 (186-313)||(35838127-35838255)
chr5 (212-313)||(36016291-36016392)
chr5 (213-314)||(36866135-36866236)
chr5 (237-313)||(10642053-10642129)
chr5 (186-313)||(24477303-24477431)
chr5 (234-302)||(38986610-38986678)
chr5 (212-314)||(6453030-6453133)
chr5 (212-313)||(4699912-4700014)
chr5 (193-302)||(26264372-26264481)
chr5 (193-302)||(28759352-28759461)
chr5 (213-264)||(20122764-20122815)
chr5 (190-313)||(20338469-20338592)
chr5 (186-313)||(42860272-42860399)
chr5 (213-302)||(2466308-2466397)
chr5 (193-303)||(4975760-4975870)
chr5 (239-303)||(1398370-1398434)
chr5 (212-264)||(1845488-1845540)
chr5 (234-285)||(3296166-3296217)
chr5 (193-264)||(7949708-7949779)
chr5 (193-264)||(16749011-16749082)
chr5 (193-264)||(17320426-17320497)
chr5 (112-154)||(4971315-4971357)
chr5 (214-264)||(19646960-19647010)
chr5 (226-264)||(26507293-26507331)
chr5 (193-262)||(39479404-39479473)
[»] chr8 (30 HSPs)
chr8 (234-313)||(42739369-42739448)
chr8 (193-293)||(6142935-6143035)
chr8 (186-305)||(15243801-15243920)
chr8 (233-313)||(2349713-2349792)
chr8 (186-313)||(30436423-30436551)
chr8 (186-313)||(35813392-35813520)
chr8 (236-313)||(3940690-3940767)
chr8 (186-313)||(45451728-45451856)
chr8 (186-313)||(3654264-3654391)
chr8 (218-313)||(9201129-9201224)
chr8 (193-302)||(5927100-5927209)
chr8 (193-302)||(6266293-6266402)
chr8 (213-302)||(15041357-15041446)
chr8 (213-302)||(24101755-24101844)
chr8 (213-302)||(26098295-26098384)
chr8 (213-302)||(38231735-38231824)
chr8 (193-302)||(31894922-31895030)
chr8 (233-313)||(28968213-28968293)
chr8 (193-264)||(11202169-11202240)
chr8 (213-264)||(37819271-37819322)
chr8 (216-302)||(40027766-40027852)
chr8 (213-302)||(7161592-7161681)
chr8 (193-302)||(41644164-41644273)
chr8 (193-302)||(41827541-41827650)
chr8 (209-264)||(5913354-5913409)
chr8 (216-302)||(7433431-7433517)
chr8 (213-264)||(27640026-27640077)
chr8 (213-263)||(24476390-24476440)
chr8 (193-302)||(41395833-41395942)
chr8 (215-264)||(44679165-44679214)
[»] chr1 (28 HSPs)
chr1 (234-313)||(46237603-46237682)
chr1 (186-302)||(31489462-31489578)
chr1 (186-313)||(9660784-9660911)
chr1 (220-301)||(32057588-32057669)
chr1 (186-313)||(12745597-12745725)
chr1 (186-313)||(12756586-12756714)
chr1 (214-313)||(33189046-33189145)
chr1 (186-313)||(42763210-42763337)
chr1 (186-313)||(43781128-43781255)
chr1 (212-313)||(45757225-45757326)
chr1 (193-302)||(5114926-5115035)
chr1 (216-302)||(19406667-19406753)
chr1 (213-264)||(39995470-39995521)
chr1 (193-276)||(45039035-45039118)
chr1 (234-313)||(48470436-48470515)
chr1 (213-302)||(1858786-1858875)
chr1 (112-154)||(24683447-24683489)
chr1 (193-302)||(30723321-30723430)
chr1 (193-302)||(41310519-41310628)
chr1 (193-302)||(48812530-48812639)
chr1 (216-264)||(28199276-28199324)
chr1 (244-303)||(15699330-15699389)
chr1 (213-276)||(21088540-21088603)
chr1 (213-264)||(44922250-44922301)
chr1 (193-264)||(48913639-48913710)
chr1 (213-264)||(50511991-50512042)
chr1 (215-264)||(42102249-42102298)
chr1 (193-261)||(40601724-40601792)
[»] scaffold0295 (1 HSPs)
scaffold0295 (226-313)||(6186-6273)
[»] scaffold0219 (1 HSPs)
scaffold0219 (212-313)||(16622-16723)
[»] scaffold0664 (1 HSPs)
scaffold0664 (193-302)||(7765-7874)
[»] scaffold1318 (1 HSPs)
scaffold1318 (193-264)||(1005-1076)
[»] scaffold0124 (1 HSPs)
scaffold0124 (193-264)||(40038-40109)
[»] scaffold0036 (1 HSPs)
scaffold0036 (213-264)||(27682-27733)
[»] scaffold0007 (1 HSPs)
scaffold0007 (213-264)||(56289-56340)
[»] scaffold1243 (1 HSPs)
scaffold1243 (213-302)||(2033-2122)
[»] scaffold0173 (1 HSPs)
scaffold0173 (235-302)||(21967-22034)


Alignment Details
Target: chr3 (Bit Score: 148; Significance: 5e-78; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 15 - 313
Target Start/End: Complemental strand, 19976093 - 19975800
Alignment:
Q  15 tatgttagaatgctagtgttatatcagaggcttttgtgtttttt---ctgctcagtttgagtggtttgaggccattaataatattagttgttnnnnnnnn 111  Q
    ||||||||| ||||| || ||||||||||| |||||||||||||   |||||||| |||||||| |||||||||||||||||||||| ||||            
T  19976093 tatgttagattgctactgctatatcagaggattttgtgtttttttttctgctcagcttgagtggattgaggccattaataatattagctgttaaaatttt 19975994  T
Q  112 ttgtaaaaatgatagaactttaaaagtcatgccttcaaaaccacaccaaacttaacccacttgtannnnnnnnngggctgccgggctacccgtagcccta 211  Q
    || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||             |  ||||||||||||||| | |    
T  19975993 ttataaaaatgatagaactttaaaagccattccttcaaaaccacaccaaacttaacccacttgtattttt--------tttcgggctacccgtagcgcca 19975902  T
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||    
T  19975901 acgggctagcccggacgggtaacgagcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattagacccaagccctacattttatt 19975802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 234 - 311
Target Start/End: Complemental strand, 33983090 - 33983013
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 311  Q
    ||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  33983090 cgggcttttccgggccgggctaaaaagccctggaaaaattcgggctccaattattaggcccaagccctacattttatt 33983013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 6888731 - 6888799
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagcccta 302  Q
    ||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  6888731 cgggcttttccgggccgggctaaaaagccctggaaaaattcgggctccaattattaggcccaagcccta 6888799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 27969571 - 27969502
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctac 303  Q
    ||||||||| ||| |||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  27969571 cgggctttttcggtccgggctaaaaagcccgggaaaaattcgggctccaattattaggcccaagccctac 27969502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 21075847 - 21075974
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  21075847 gggcttccgggcagcccgaagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 21075946  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  21075947 attcggcccaagccctacattttattcg 21075974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 27877673 - 27877546
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  27877673 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 27877574  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  27877573 attcggcccaagccctacattttattcg 27877546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 43746242 - 43746370
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  43746242 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaat 43746341  T
Q  285 tattaggcccaagccctacatattattcg 313  Q
    |||| |||||||||||||||| |||||||    
T  43746342 tattcggcccaagccctacattttattcg 43746370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 10267953 - 10267898
Alignment:
Q  209 ctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  10267953 ctaacgggctagccctaacgggtaacgggcttttaagggccgggctaaaaagccct 10267898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 305
Target Start/End: Complemental strand, 21389890 - 21389771
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    |||||| |||||||||||||||||  ||||||||||||  |||||   ||||||||||||||| |||| ||||| ||||    ||||| || |||| |||    
T  21389890 gggctggcgggctacccgtagcccgcacgggctagccctaacgggcttcgggcttttacgggctgggccaaaaaaccctatttaaatttgggctgccatt 21389791  T
Q  286 attaggcccaagccctacat 305  Q
     |||||||||||||||||||    
T  21389790 tttaggcccaagccctacat 21389771  T

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Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 46312005 - 46311878
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || || || || |||||    
T  46312005 gggcttccgggcagcccgaagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaattttgggctccaatt 46311906  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  46311905 attcggcccaagccctacattttattcg 46311878  T

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Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 50737950 - 50738029
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||||||| |||  | |||||| ||||||||| |||||||    
T  50737950 cgggctttttcgggccgggctaaaaaaccctgaaaaaattcggactgctatttatcggcccaggccctacattttattcg 50738029  T

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Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 50774904 - 50774825
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||||||| |||  | |||||| ||||||||| |||||||    
T  50774904 cgggctttttcgggccgggctaaaaaaccctgaaaaaattcggactgctatttatcggcccaggccctacattttattcg 50774825  T

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Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 246 - 303
Target Start/End: Original strand, 42854312 - 42854369
Alignment:
Q  246 ggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctac 303  Q
    ||||||||||||||||| || |||||||||| || |||||||||||||||||||||||    
T  42854312 ggccgggctaaaaagccttgaaaaaattcgggctccaattattaggcccaagccctac 42854369  T

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Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 46219219 - 46219118
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 311  Q
    ||||||||||||  |||||  | ||||||||||||||| ||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||    
T  46219219 acgggctagccctaacgggccaagggcttttacgggcccggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttatt 46219120  T
Q  312 cg 313  Q
    ||    
T  46219119 cg 46219118  T

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Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 2869120 - 2869025
Alignment:
Q  218 tagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||| |||||| | ||||||| |||||||||| |||||||||||  | |||||||| |||||||| | |||||||||| |||| | |||||||    
T  2869120 tagcccgtacgggttatgggctttcacgggccgggttaaaaagccctaaagaaattcgggctgcaattttcaggcccaagctctacgttttattcg 2869025  T

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Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 7910145 - 7910254
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  7910145 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 7910243  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  7910244 cccaagcccta 7910254  T

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Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 9301047 - 9301118
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  9301047 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 9301118  T

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Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 26823148 - 26823077
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  26823148 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 26823077  T

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Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 32774428 - 32774499
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  |||||  |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  32774428 cgggctacccgcggccctttcgggctagccctaacgggtaccgggctttttagggccgggctaaaaagccct 32774499  T

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Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 43088079 - 43088028
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  43088079 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 43088028  T

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Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 54313332 - 54313403
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  |||||  |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  54313332 cgggctacccgcggccctttcgggctagccctaacgggtaccgggctttttagggccgggctaaaaagccct 54313403  T

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Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 279
Target Start/End: Original strand, 29522805 - 29522871
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggact 279  Q
    |||||||||||  ||||||| |||||||||  ||||||||||||||||||||   ||||||||||||    
T  29522805 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccctattaaaattcggact 29522871  T

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Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 31412121 - 31412229
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||| |||||  |||||||||||  | ||||| |||| ||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  31412121 cgggctacccgtggccctt-cgggctagccctaatgggtaccgggtttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 31412218  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  31412219 cccaagcccta 31412229  T

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Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 41933407 - 41933298
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| |||||||||| |||||||||   ||||||||| || |||| | |||||    
T  41933407 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctgaaaagccctattaaaattcgggct-caatattttagg 41933309  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  41933308 cccaagcccta 41933298  T

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Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 43736088 - 43736046
Alignment:
Q  228 gggtaacgggcttttacgggccgggctaaaaagccctggaaaa 270  Q
    |||| |||||||||||||||||||||||||||||||| |||||    
T  43736088 gggttacgggcttttacgggccgggctaaaaagccctagaaaa 43736046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 55423846 - 55423737
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||| ||||   ||||||||| || |||| | |||||    
T  55423846 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccctattaaaattcgggct-caatattttagg 55423748  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  55423747 cccaagcccta 55423737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 1842648 - 1842599
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagcc 262  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||    
T  1842648 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagcc 1842599  T

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Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 3995138 - 3995087
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  3995138 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccct 3995087  T

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Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 302
Target Start/End: Complemental strand, 7399812 - 7399722
Alignment:
Q  213 cgggctagcccggacgggtaa-cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    |||||||||||  ||||| || |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  7399812 cgggctagccctaacggggaatcgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 7399722  T

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Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 10804543 - 10804594
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  |||||||  ||||||||| ||||||||||||||||||||    
T  10804543 cgggctagccctaacgggtactgggcttttaagggccgggctaaaaagccct 10804594  T

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Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 17525307 - 17525378
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   ||||||||||| ||||| || |||||||||| | ||||||||||||||||||    
T  17525307 cgggctacccgcggcccattcgggctagccctgacggataccgggcttttaagagccgggctaaaaagccct 17525378  T

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Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 26898348 - 26898277
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| ||| |||||| ||||||||||||||||||||    
T  26898348 cgggctacccgcggcccgttcgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccct 26898277  T

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Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 50155531 - 50155602
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||| ||||||||||||||||    
T  50155531 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggtcgggctaaaaagccct 50155602  T

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Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 1695108 - 1694999
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  | ||||| |||| ||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  1695108 cgggctacccgcggcccattcgggctagccctaaagggtaccgggtttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 1695010  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  1695009 cccaagcccta 1694999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 302
Target Start/End: Complemental strand, 15489194 - 15489101
Alignment:
Q  209 ctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    |||||||||||||||  ||||||| | | |||||| ||| ||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  15489194 ctaacgggctagccctaacgggtaccagacttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 15489101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 2e-74; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 7505535 - 7505258
Alignment:
Q  15 tatgttagaatgctagtgttatatcagaggcttttgtgttttttctgctcagtttgagtggtttgaggccattaataatattagttgttnnnnnnnnttg 114  Q
    ||||||||| ||||| || || |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||        ||     
T  7505535 tatgttagattgctactgctacatcagaggcttttgtgttttttctgctcagcttgagtggattgaggccattaataatattagttgttaaaaaaaatta 7505436  T
Q  115 taaaaatgatagaactttaaaagtcatgccttcaaaaccacaccaaacttaacccacttgtannnnnnnnngggctgccgggctacccgtagccctaacg 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||         |||||||||||||                    
T  7505435 taaaaatgatagaactttaaaagccatgccttcaaaaccacaccaaacttaacccacttgtattttttttcgggctgccgggct---------------- 7505352  T
Q  215 ggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattc 312  Q
        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  7505351 ----agcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattc 7505258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 31271936 - 31272097
Alignment:
Q  15 tatgttagaatgctagtgttatatcagaggcttttgtgttttttctgctcagtttgagtggtttgaggccattaataatattagttgttnnnnnnnnttg 114  Q
    ||||||||| ||||| || |||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||        ||     
T  31271936 tatgttagattgctactgctatatcagagacttttgtgttttttctgctcagcttgagtggattgaggccattaataatattagctgttaaaaaaattta 31272035  T
Q  115 taaaaatgatagaactttaaaagtcatgccttcaaaaccacaccaaacttaacccacttgta 176  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31272036 taaaaatgatagaactttaaaagccatgccttcaaaaccacaccaaacttaacccacttgta 31272097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 31272123 - 31272205
Alignment:
Q  231 taacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  31272123 taacgtgcttttacgggccgggctaaaaagccctggaaaaattcgtgctgcaattattaggcccaagccctacattttattcg 31272205  T

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Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 47381487 - 47381556
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctac 303  Q
    |||||||||  |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  47381487 cgggcttttttgggccgggctaaaaagccctggaaaaattcgggctccaattattaggcccaagccctac 47381556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 33604653 - 33604585
Alignment:
Q  235 gggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctac 303  Q
    |||||||| |||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  33604653 gggctttttcgggtcgggctaaaaagccctggaaaaattcgggctacaattattaggcccaagccctac 33604585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 35710013 - 35709925
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccct 301  Q
    |||||||||||| ||||||  ||||||||| ||||||||||||||||||||||  |||||  || |||||||| |||||||||||||||    
T  35710013 cgggctagcccgaacgggttgcgggctttttcgggccgggctaaaaagccctgataaaatatgggctgcaatttttaggcccaagccct 35709925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 23025309 - 23025182
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  23025309 gggcttccgggcagcccggagcccggacgggctagccctaacgggctaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 23025210  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  23025209 attcggcccaagccctacattttattcg 23025182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 1873757 - 1873656
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 311  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||    
T  1873757 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttatt 1873658  T
Q  312 cg 313  Q
    ||    
T  1873657 cg 1873656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 39494005 - 39494133
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | |||||||||| |||||||||||||||||||    ||| ||||| || ||||    
T  39494005 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacaggccgggctaaaaagccctattcaaatttcgggctccaat 39494104  T
Q  285 tattaggcccaagccctacatattattcg 313  Q
    |||| |||||||||||||||| |||||||    
T  39494105 tattcggcccaagccctacattttattcg 39494133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 8613883 - 8613774
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    ||||||||||| |||||   || ||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  8613883 cgggctacccgcagcccattcgagctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 8613785  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  8613784 cccaagcccta 8613774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 47761690 - 47761779
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  47761690 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 47761779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 16526309 - 16526208
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 311  Q
    ||||||||||||  |||||  | ||||||||||||||||| ||||||||||||    || ||||| || |||||||| ||| |||||||||||| |||||    
T  16526309 acgggctagccctaacgggccaagggcttttacgggccggactaaaaagccctcttcaatttcgggctccaattattcggctcaagccctacattttatt 16526210  T
Q  312 cg 313  Q
    ||    
T  16526209 cg 16526208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 10993334 - 10993206
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  | |||  | ||||||||||||||||||||||||||||||    ||| ||||  || ||||    
T  10993334 gggcttccgggcagcccggagcccggacgggctagccctaatgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgagctccaat 10993235  T
Q  285 tattaggcccaagccctacatattattcg 313  Q
    |||| |||||||||||||||| |||||||    
T  10993234 tattcggcccaagccctacattttattcg 10993206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 32795844 - 32795773
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  32795844 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 32795773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 34202642 - 34202713
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  34202642 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 34202713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 37471505 - 37471576
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  37471505 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 37471576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 24764321 - 24764212
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  |||| || |||||||||| ||||||||||||||||||||   |||||||||||  |||| | |||||    
T  24764321 cgggctacccgcggcccgttcgggctagccctaacggataccgggcttttaagggccgggctaaaaagccctattaaaattcggac-acaatattttagg 24764223  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  24764222 cccaagcccta 24764212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 39560635 - 39560526
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| || ||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  39560635 cgggctacccgcggcccattcgggctagccctaacgggtaccgagcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 39560537  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  39560536 cccaagcccta 39560526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 30072155 - 30072084
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    ||||||||||| |||||   |||| ||||||  |||||||||||||||| | |||| |||||||||||||||    
T  30072155 cgggctacccgcagcccgttcgggttagccctaacgggtaacgggctttaaagggctgggctaaaaagccct 30072084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 33590275 - 33590330
Alignment:
Q  209 ctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||||||  | ||||| || ||||||| ||||||||||||||||||||    
T  33590275 ctaacgggctagccctaatgggtaccgagcttttaagggccgggctaaaaagccct 33590330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 276
Target Start/End: Complemental strand, 47099284 - 47099201
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcgg 276  Q
    |||||||||||| ||||   |||||||||||  ||||||| | ||  |||| |||||||||||||||||||||  |||||||||    
T  47099284 cgggctacccgtggcccgttcgggctagccctaacgggtaccaggtatttaagggccgggctaaaaagccctgttaaaattcgg 47099201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 49112653 - 49112590
Alignment:
Q  218 tagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgc 281  Q
    ||||||| ||||||   |||||||| |||| ||||||||||||||||| |||||||||| ||||    
T  49112653 tagcccgaacgggttttgggctttttcgggtcgggctaaaaagccctgaaaaaattcgggctgc 49112590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 279
Target Start/End: Complemental strand, 13598183 - 13598117
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggact 279  Q
    |||||||||||  |||| || |||||||||  ||||||||||||||||||||   ||||||||||||    
T  13598183 cgggctagccctaacggatagcgggctttttagggccgggctaaaaagccctattaaaattcggact 13598117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 276
Target Start/End: Original strand, 17511311 - 17511353
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcgg 276  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||    
T  17511311 cgggctttttcgggccgggctaaaaaaccctgaaaaaattcgg 17511353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 276
Target Start/End: Complemental strand, 17541903 - 17541861
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcgg 276  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||    
T  17541903 cgggctttttcgggccgggctaaaaaaccctgaaaaaattcgg 17541861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 35710685 - 35710647
Alignment:
Q  226 acgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  35710685 acgggtaacgggctttttagggccgggctaaaaagccct 35710647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 36643449 - 36643395
Alignment:
Q  210 taacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    ||||||||||||||  ||||||| |||||||||  |||||||| |||||||||||    
T  36643449 taacgggctagccctaacgggtaccgggctttttagggccggggtaaaaagccct 36643395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 17475716 - 17475793
Alignment:
Q  204 tagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgc 281  Q
    |||||| |||||||||||||  ||| |   ||||||||| |||| ||||||||||| ||||| |||||||||| ||||    
T  17475716 tagcccgaacgggctagccctaacgagcttcgggctttttcgggtcgggctaaaaaaccctgaaaaaattcgggctgc 17475793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 281
Target Start/End: Complemental strand, 17577498 - 17577421
Alignment:
Q  204 tagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgc 281  Q
    |||||| |||||||||||||  ||| |   ||||||||| |||| ||||||||||| ||||| |||||||||| ||||    
T  17577498 tagcccgaacgggctagccctaacgagcttcgggctttttcgggtcgggctaaaaaaccctgaaaaaattcgggctgc 17577421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 34182087 - 34182124
Alignment:
Q  227 cgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  34182087 cgggtaccgggcttttaagggccgggctaaaaagccct 34182124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 311
Target Start/End: Complemental strand, 41200322 - 41200245
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 311  Q
    ||||||||| ||| |||||||||||| ||||| |||||||||| |||| |||  | ||| || ||||||||| |||||    
T  41200322 cgggctttttcggaccgggctaaaaaaccctgaaaaaattcgggctgctatttatcggctcaggccctacattttatt 41200245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 2621446 - 2621526
Alignment:
Q  233 acgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||||  |||||||  ||||| ||| ||  ||||||||| ||||||||||||||| ||| |||||| | |||||||    
T  2621446 acgggcttttttgggccggattaaaaggccttgagaaaattcgggctgcaattattaggctcaaaccctacgttttattcg 2621526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 31271507 - 31271547
Alignment:
Q  220 gcccggacgggtaacgggcttttacgggccgggctaaaaag 260  Q
    ||||| ||||||| ||||||||| |||||||||||||||||    
T  31271507 gcccgaacgggtagcgggctttttcgggccgggctaaaaag 31271547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 40 - 313
Target Start/End: Complemental strand, 19241048 - 19240790
Alignment:
Q  40 agaggcttttgtgttttttctgctcagtttgagtggtttgaggccattaataatattagttgttnnnnnnnnttgtaaaaatgatagaactttaaaagtc 139  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||        || |||||||||| |||||||||||  |    
T  19241048 agaggcttttgtgttttttctgctcagtttgagtggattgaggccattaataatattagttgttaaaaaaaattataaaaatgattgaactttaaaac-c 19240950  T
Q  140 atgccttcaaaaccacaccaaacttaacccacttgtannnnnnnnngggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggct 239  Q
    |||||||||||||||||||||||||||||||||||||          ||||||||||              ||||||||||||||||||||||||||  |    
T  19240949 atgccttcaaaaccacaccaaacttaacccacttgtatttttttccaggctgccggg--------------aacgggctagcccggacgggtaacggatt 19240864  T
Q  240 tttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||| || |||||||||| |||||| |||||||||| ||||||||||||||||||| |||||||| |||||||    
T  19240863 tttacaggtcgggctaaaatgccctgaaaaaattcgggctgcaattattaggcccaaaccctacattttattcg 19240790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 44341337 - 44341214
Alignment:
Q  190 tgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattatta 289  Q
    ||||||||| ||| |||||| |||||||||||||| | |||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||     
T  44341337 tgccgggctgcccttagcccaaacgggctagcccgaaagggttacgggcttttacgggccgggctaaaaagccctggaagaatccggactgcaattattc 44341238  T
Q  290 ggcccaagccctacatattattcg 313  Q
    |||||||||||||||| |||||||    
T  44341237 ggcccaagccctacattttattcg 44341214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 193 - 313
Target Start/End: Complemental strand, 32767722 - 32767602
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 292  Q
    |||||| ||||| |||| ||||||||||||   ||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32767722 cgggctgcccgtggcccgaacgggctagccttaacgggttccgggctttttcgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggc 32767623  T
Q  293 ccaagccctacatattattcg 313  Q
    |||||||||| || |||||||    
T  32767622 ccaagccctatattttattcg 32767602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 43286269 - 43286348
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||    
T  43286269 cgggctttttcgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacgttttattcg 43286348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 3415234 - 3415299
Alignment:
Q  248 ccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||||||    
T  3415234 ccgggctaaaaagccctggaaaaattcgggctccaattattaggcccaagccctacgttttattcg 3415299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 20034257 - 20034384
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  20034257 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 20034356  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  20034357 attcggcccaagccctacattttattcg 20034384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 52464103 - 52464182
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||| || ||||||||||||||| || ||||||||||| ||| |||||||||||||||||||||| | |||||||    
T  52464103 cgggctttttcgagccgggctaaaaagctcttgaaaaattcgggctgtaattattaggcccaagccctacgttttattcg 52464182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 39345980 - 39345852
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  39345980 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaat 39345881  T
Q  285 tattaggcccaagccctacatattattcg 313  Q
    |||| |||||||||||||||| |||||||    
T  39345880 tattcggcccaagccctacattttattcg 39345852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 2323804 - 2323882
Alignment:
Q  235 gggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||||    
T  2323804 gggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcg 2323882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 27870121 - 27870043
Alignment:
Q  235 gggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||||    
T  27870121 gggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattatttggcccaagccctacattttattcg 27870043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 45522622 - 45522521
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 311  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||| ||    || ||||| || |||||||| |||||||||||||||| |||||    
T  45522622 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagctctcttcaatttcgggctccaattattcggcccaagccctacattttatt 45522523  T
Q  312 cg 313  Q
    ||    
T  45522522 cg 45522521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 47295686 - 47295585
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 311  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| || ||||||||||||| |||||    
T  47295686 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggtccaagccctacattttatt 47295587  T
Q  312 cg 313  Q
    ||    
T  47295586 cg 47295585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 313
Target Start/End: Original strand, 54134477 - 54134578
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 311  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || || || || |||||||| |||||||||||||||| |||||    
T  54134477 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaattttgggctccaattattcggcccaagccctacattttatt 54134576  T
Q  312 cg 313  Q
    ||    
T  54134577 cg 54134578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 313
Target Start/End: Original strand, 9455303 - 9455423
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 292  Q
    |||||| |||||||||| ||| ||| |||||  |||||  |||| ||||| ||||||  |||||||||||||| |||||||||| |||||||||||  |     
T  9455303 cgggctgcccgtagcccgaactggccagccctaacgggctacggcctttttcgggcccagctaaaaagccctgaaaaaattcgggctgcaattattcagt 9455402  T
Q  293 ccaagccctacatattattcg 313  Q
    |||  |||||||| |||||||    
T  9455403 ccagtccctacattttattcg 9455423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 17543896 - 17543768
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  | |||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  17543896 gggcttccgggcagcccggagcccggacgggctagccctaatgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaat 17543797  T
Q  285 tattaggcccaagccctacatattattcg 313  Q
    |||| |||||||||||||||| |||||||    
T  17543796 tattcggcccaagccctacattttattcg 17543768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 32594144 - 32594064
Alignment:
Q  233 acgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    |||||||||| |||| |||| |||||||||||| |||||||||| ||||||||||| || ||| | ||||||| |||||||    
T  32594144 acgggctttttcgggtcgggttaaaaagccctgaaaaaattcgggctgcaattattcggtccaggtcctacattttattcg 32594064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 313
Target Start/End: Complemental strand, 951488 - 951394
Alignment:
Q  219 agcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||||||  | ||||||||||||||||||||||||||||||    || ||||| || || ||||| |||||||||| ||||| |||||||    
T  951488 agcccggacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccacttattcggcccaagccttacattttattcg 951394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 313
Target Start/End: Original strand, 1705199 - 1705292
Alignment:
Q  219 agcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    |||||| |||||  ||| |||||| ||||||||||||||||||||| ||||||||||| |||| |||||| ||||||  |||| ||| |||||||    
T  1705199 agcccgaacgggctacgagctttttcgggccgggctaaaaagccct-gaaaaattcgggctgctattatttggcccagaccctgcattttattcg 1705292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 15194609 - 15194500
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  15194609 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 15194511  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  15194510 cccaagcccta 15194500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 56264393 - 56264502
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  56264393 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 56264491  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  56264492 cccaagcccta 56264502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 34030396 - 34030327
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctac 303  Q
    |||||||||||||||||||| |||||||||||   |||||| | |||| ||| |||||||||||||||||    
T  34030396 cgggcttttacgggccgggccaaaaagccctgtttaaattcaggctgccatttttaggcccaagccctac 34030327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 1324942 - 1325014
Alignment:
Q  241 ttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    |||||||| ||||||||||||||||||||||||||| ||  |||| ||  ||||||||| ||||| |||||||    
T  1324942 ttacgggctgggctaaaaagccctggaaaaattcgggctctaatttttcagcccaagccttacattttattcg 1325014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 34859066 - 34859146
Alignment:
Q  233 acgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||||  ||||||||||||||||||||| |||||||| | || | |||||| |||||| ||||| ||| |||||||    
T  34859066 acgggcttttttgggccgggctaaaaagccctgaaaaaattcaggcttctattattcggcccaggccctgcattttattcg 34859146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 40731191 - 40731262
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   ||| |||||||  |||||||||||||||||| ||||||||||||||||||||    
T  40731191 cgggctacccgcggcccattcggactagccctaacgggtaacgggcttttaagggccgggctaaaaagccct 40731262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 54093976 - 54094047
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    ||||||||||| |||||   |||||||||||  ||||||| ||| |||||| ||||||||||||||||||||    
T  54093976 cgggctacccgcagcccattcgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccct 54094047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 401347 - 401456
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| |||||| |||||||||||||   ||||||||| || |||| | |||||    
T  401347 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgagctaaaaagccctattaaaattcgggct-caatattttagg 401445  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  401446 cccaagcccta 401456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 26706897 - 26707006
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| |||||||||||||||||| |   ||||||||| || |||| | |||||    
T  26706897 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccatattaaaattcgggct-caatattttagg 26706995  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  26706996 cccaagcccta 26707006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 35666713 - 35666604
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| |||||||| |||||||||||   ||||||||| || |||| | |||||    
T  35666713 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccggggtaaaaagccctattaaaattcgggct-caatattttagg 35666615  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  35666614 cccaagcccta 35666604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 51401349 - 51401417
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagcccta 302  Q
    |||| |||| |||||||||||||||||| |||||||||||||| ||| |||| ||  |||||| |||||    
T  51401349 cgggttttttcgggccgggctaaaaagctctggaaaaattcgggctggaatttttgagcccaaacccta 51401417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 6643303 - 6643354
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||| ||||    
T  6643303 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccct 6643354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 16623572 - 16623521
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  16623572 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccct 16623521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 19823653 - 19823704
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||||||||| ||||||| ||||||||||||    
T  19823653 cgggctagccctaacgggtaccgggcttttaagggccggtctaaaaagccct 19823704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 24678382 - 24678331
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||| ||||    
T  24678382 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccct 24678331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 39240414 - 39240485
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   ||||||||| |  ||||||| |||||||||| ||||||||||||||||||||    
T  39240414 cgggctacccgcggcccattcgggctagctctaacgggtaccgggcttttaagggccgggctaaaaagccct 39240485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 51435564 - 51435635
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   ||||||||||   ||||||| |||||||||| ||||||||||||||||||||    
T  51435564 cgggctacccgcggcccattcgggctagccttaacgggtaccgggcttttaagggccgggctaaaaagccct 51435635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 56114183 - 56114254
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||| ||||   |||||||||||  ||||||| |||||||||  || |||||||||||||||||    
T  56114183 cgggctacccgtggcccgttcgggctagccctaacgggtaccgggctttttaggaccgggctaaaaagccct 56114254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 279
Target Start/End: Complemental strand, 50097525 - 50097439
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggact 279  Q
    |||||||||||  ||||   |||||||||||  ||||||| | | |||||| ||||||||||||||||||||   ||||||||||||    
T  50097525 cgggctacccgcggcccattcgggctagccctaacgggtaccagacttttaagggccgggctaaaaagcccttttaaaattcggact 50097439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 53724993 - 53724884
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  | |||||  ||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  53724993 cgggctacccgcggcccattcgggctagccctaatgggtactgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 53724895  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  53724894 cccaagcccta 53724884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 302
Target Start/End: Complemental strand, 53925452 - 53925363
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    |||||||||||  ||||||| |||  ||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  53925452 cgggctagccctaacgggtaccggatttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 53925363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 41361341 - 41361292
Alignment:
Q  250 gggctaaaaagccctggaaaaattcggactgcaattattaggcccaagcc 299  Q
    ||||||||||||||||  ||||| ||| |||||||| |||||||||||||    
T  41361341 gggctaaaaagccctgctaaaatacgggctgcaatttttaggcccaagcc 41361292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 32594887 - 32594851
Alignment:
Q  227 cgggtaacgggcttttacgggccgggctaaaaagccc 263  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  32594887 cgggtaacgggctttttcgggccgggctgaaaagccc 32594851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 27966567 - 27966722
Alignment:
Q  15 tatgttagaatgctagtgttatatcagaggcttttgtgttttttctgctcagtttgagtggtttgaggccattaataatattagttgttnnnnnnnnttg 114  Q
    ||||||||| ||||| || |||||||||||||||||||||      |||||| |||||||| |||||||||||||||||||||||||||        |||    
T  27966567 tatgttagattgctactgctatatcagaggcttttgtgtt------gctcagcttgagtggattgaggccattaataatattagttgttaaaaaaaattg 27966660  T
Q  115 taaaaatgatagaactttaaaagtcatgccttcaaaaccacaccaaacttaacccacttgta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27966661 taaaaatgatagaactttaaaagtcatgccttcaaaaccacaccaaacttaacccacttgta 27966722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 27966740 - 27966832
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacat 305  Q
    |||||||||  |||||||||| ||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  27966740 cgggctagcatggacgggtaatgggcttttatgggccgggctaaaaagccctggaaaaatttgggctgcaattattaggcccaagccctacat 27966832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 20139313 - 20139234
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||    
T  20139313 cgggctttttcgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacgttttattcg 20139234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 22193556 - 22193635
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||    
T  22193556 cgggctttttcgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacgttttattcg 22193635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 31472452 - 31472575
Alignment:
Q  190 tgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattatta 289  Q
    ||||||||| ||||| |||| ||||||||||||   |||||   | ||||||| |||||| |||||||||||||| ||||||||||| ||||||||||||    
T  31472452 tgccgggctgcccgtggcccgaacgggctagccataacgggctcctggctttttcgggcctggctaaaaagccctagaaaaattcgggctgcaattatta 31472551  T
Q  290 ggcccaagccctacatattattcg 313  Q
    |||||||||||||| | |||||||    
T  31472552 ggcccaagccctacgttttattcg 31472575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 15066048 - 15065947
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 311  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||    
T  15066048 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttatt 15065949  T
Q  312 cg 313  Q
    ||    
T  15065948 cg 15065947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 2067274 - 2067165
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  2067274 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 2067176  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  2067175 cccaagcccta 2067165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 10997838 - 10997760
Alignment:
Q  235 gggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||| ||| |||||||    
T  10997838 gggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctccattttattcg 10997760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 3044368 - 3044299
Alignment:
Q  244 cgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    |||||||||||||||| ||||| |||||||||| |||| |||||| |||||| ||||| ||| |||||||    
T  3044368 cgggccgggctaaaaaaccctgaaaaaattcgggctgctattattcggcccaggccctgcattttattcg 3044299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 12272226 - 12272295
Alignment:
Q  244 cgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    |||||||||||||||||||||| |||||||||| |||| |||  | |||||| ||||||||| |||||||    
T  12272226 cgggccgggctaaaaagccctgaaaaaattcgggctgctatttatcggcccaggccctacattttattcg 12272295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 17869230 - 17869339
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 292  Q
    |||||| ||| |||||| | ||||| |||||  | ||||  ||||||||| |||||||||||||||| ||||| |||||||||| ||| |||| ||  ||    
T  17869230 cgggctgcccttagcccgagcgggccagcccaaatgggttgcgggctttttcgggccgggctaaaaaaccctgaaaaaattcgggctggaattttttagc 17869329  T
Q  293 ccaagcccta 302  Q
    ||||||||||    
T  17869330 ccaagcccta 17869339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 22988151 - 22988222
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  22988151 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 22988222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 23800245 - 23800174
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  23800245 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 23800174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 2702977 - 2703086
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  |||||||  ||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  2702977 cgggctacccgcggcccattcgggctagccctaacgggtactgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 2703075  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  2703076 cccaagcccta 2703086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 313
Target Start/End: Original strand, 11369564 - 11369666
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaattattaggcccaagccctacatattat 310  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || |||||||| ||||||| | |||||| ||||    
T  11369564 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctctttaaatttcgggctccaattattcggcccaaactctacattttat 11369663  T
Q  311 tcg 313  Q
    |||    
T  11369664 tcg 11369666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 26555218 - 26555307
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    ||||||| |||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  26555218 cgggctaaccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 26555307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 29641046 - 29641135
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    |||| ||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  29641046 cgggatagccctaacgggtatcgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 29641135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 4170937 - 4170986
Alignment:
Q  215 ggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  4170937 ggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 4170986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 302
Target Start/End: Original strand, 31511238 - 31511314
Alignment:
Q  226 acgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  31511238 acgggtatcgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 31511314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 13836031 - 13835967
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcgga 277  Q
    |||||||||||  ||||||| |||||||||  ||||||||||||||||||||   ||||||||||    
T  13836031 cgggctagccctaacgggtatcgggctttttagggccgggctaaaaagccctacgaaaattcgga 13835967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 305
Target Start/End: Original strand, 32465657 - 32465729
Alignment:
Q  234 cgggcttttacgggccggg-ctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacat 305  Q
    ||||||||||||||||||| | |||||||||||   ||||||||  ||| ||| |||||||||||||||||||    
T  32465657 cgggcttttacgggccgggtcaaaaaagccctgtttaaattcgggttgccatttttaggcccaagccctacat 32465729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 17547608 - 17547561
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaag 260  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||    
T  17547608 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaag 17547561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 302
Target Start/End: Original strand, 31655523 - 31655606
Alignment:
Q  219 agcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagcccta 302  Q
    |||||| ||||| ||||||||||| ||| |||||||||||||||| | |   |||||| ||| |||| |||||||||| |||||    
T  31655523 agcccgaacgggcaacgggctttttcggaccgggctaaaaagcccggaatttattcgggctgtaatttttaggcccaaacccta 31655606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 9035080 - 9035189
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||| ||||||  ||||||| |||||||||| |||||| |||||||||||||   ||||||||| || |||| | |||||    
T  9035080 cgggctacccgcggcccattcgggatagccctaacgggtaccgggcttttaagggccgtgctaaaaagccctattaaaattcgggct-caatattttagg 9035178  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  9035179 cccaagcccta 9035189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 15068034 - 15068072
Alignment:
Q  226 acgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  15068034 acgggtaccgggcttttaagggccgggctaaaaagccct 15068072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 15183747 - 15183836
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    |||||||||||  ||||| | ||||||||||  |||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  15183747 cgggctagccctaacgggaaccgggcttttaaaggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 15183836  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 17879033 - 17879091
Alignment:
Q  244 cgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagcccta 302  Q
    |||||| ||||||||||||||| |||||||||| ||| |||| ||  ||||||||||||    
T  17879033 cgggccaggctaaaaagccctgaaaaaattcgggctggaattttttagcccaagcccta 17879091  T

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Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 193 - 313
Target Start/End: Original strand, 15614122 - 15614242
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 292  Q
    |||||| ||||| |||| |||||||||||||  || ||   ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||    
T  15614122 cgggctgcccgtggcccgaacgggctagccctaacaggctccgggctttttcggggcgggctaaaaagccctggaaaaattcgggctgcaattattaggc 15614221  T
Q  293 ccaagccctacatattattcg 313  Q
    |||||||||| || |||||||    
T  15614222 ccaagccctatattttattcg 15614242  T

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Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 38838004 - 38838131
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||||||||||||||||| ||||  |||||  ||||||| ||||  ||||||||||| ||| |||||||| ||||| |  |||||||||||||||||||    
T  38838004 gggctgccgggctacccgtggcccgtacgggtaagcccggtcgggctacgggcttttatgggtcgggctaacaagccttaaaaaaattcggactgcaatt 38838103  T
Q  286 attaggcccaagccctacatattattcg 313  Q
     ||||||||||||||||| | |||||||    
T  38838104 tttaggcccaagccctacgttttattcg 38838131  T

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Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 5271179 - 5271092
Alignment:
Q  226 acgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    |||||| ||||| |||| ||||||||||||||||| ||||||||||||||| || ||||| || |||||||||||| ||| |||||||    
T  5271179 acgggttacggggttttgcgggccgggctaaaaagtcctggaaaaattcgggctccaatttttcggcccaagccctgcattttattcg 5271092  T

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Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 15560532 - 15560659
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  15560532 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 15560631  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  15560632 attcggcccaagccctacattttattcg 15560659  T

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Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 193 - 314
Target Start/End: Complemental strand, 4565057 - 4564937
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 292  Q
    |||||| ||||| |||| |||||| |||||| ||||||  |||||||||| ||||  ||| |||||| | |||||||| ||||| |||||||| ||||||    
T  4565057 cgggctgcccgtggcccaaacgggttagccctgacgggctacgggctttttcgggttgggttaaaaa-ctctggaaaatttcgggctgcaatttttaggc 4564959  T
Q  293 ccaagccctacatattattcga 314  Q
     |||||||||||| ||||||||    
T  4564958 acaagccctacattttattcga 4564937  T

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Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 313
Target Start/End: Complemental strand, 25096424 - 25096324
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattc 312  Q
    |||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| ||||||    
T  25096424 cgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattc 25096325  T
Q  313 g 313  Q
    |    
T  25096324 g 25096324  T

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Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 42730728 - 42730807
Alignment:
Q  233 acgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    |||||||||| |||| ||||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| |||||||    
T  42730728 acgggctttt-cgggtcgggctaaaaagccctgaaaaaattcgggctgctattattcggcccaagccctgcattttattcg 42730807  T

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Target: chr2; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 20922773 - 20922828
Alignment:
Q  233 acgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattatt 288  Q
    |||||||||| |||||||||||||||||||||| |||||||||| |||||||||||    
T  20922773 acgggctttttcgggccgggctaaaaagccctgaaaaaattcgggctgcaattatt 20922828  T

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Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 29201372 - 29201499
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  |||| |||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  29201372 gggcttccgggcagcccggagcccggacggtctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 29201471  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  29201472 attcggcccaagccctacattttattcg 29201499  T

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Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 21747515 - 21747437
Alignment:
Q  235 gggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||||    
T  21747515 gggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcg 21747437  T

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Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 9470923 - 9470844
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    |||| |||| |||||||||||||||||||||| |||||||||| |||| |||  | ||||||| |||||||| |||||||    
T  9470923 cgggatttttcgggccgggctaaaaagccctgaaaaaattcgggctgctatttatcggcccaaaccctacattttattcg 9470844  T

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Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 40000753 - 40000879
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| |  |||||    
T  40000753 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggc-ccaatt 40000851  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  40000852 attcggcccaagccctacattttattcg 40000879  T

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Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 40861001 - 40861128
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||| ||||||||||||||    || ||||| || |||||    
T  40861001 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccaggctaaaaagccctcttcaatttcgggctccaatt 40861100  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| ||| |||||||||||| |||||||    
T  40861101 attcggctcaagccctacattttattcg 40861128  T

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Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 305
Target Start/End: Original strand, 26556474 - 26556568
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaattattaggcccaagccctacat 305  Q
    ||||||||||||  |||||| | | | ||||||||||||||||||||||||||    ||||||||  ||||||||||| ||||||||||||||||    
T  26556474 acgggctagccctaacgggttatgagtttttacgggccgggctaaaaagccctcttcaaaattcgagctgcaattattcggcccaagccctacat 26556568  T

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Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 27496012 - 27495903
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  27496012 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 27495914  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  27495913 cccaagcccta 27495903  T

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Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 1002507 - 1002558
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  1002507 cgggctagccctaacgggtaccgggcttttatgggccgggctaaaaagccct 1002558  T

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Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 1346260 - 1346369
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| ||| |||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  1346260 cgggctacccgcggcccattcgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 1346358  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  1346359 cccaagcccta 1346369  T

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Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 2650090 - 2650179
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    |||||||||||  ||||||| |||||||||| || |||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  2650090 cgggctagccctaacgggtaccgggcttttaaggaccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 2650179  T

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Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 17920886 - 17920808
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattc 312  Q
    ||||||||| |||||||||||||||||||||  |||||||| | |||| |||  | ||||||| |||||||| ||||||    
T  17920886 cgggctttttcgggccgggctaaaaagccctaaaaaaattcaggctgctatttatcggcccaaaccctacattttattc 17920808  T

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Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 35439538 - 35439627
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    |||||| ||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  35439538 cgggcttgccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 35439627  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 13247835 - 13247786
Alignment:
Q  215 ggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  13247835 ggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 13247786  T

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Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 30801211 - 30801259
Alignment:
Q  216 gctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    ||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  30801211 gctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 30801259  T

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Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 28223022 - 28222971
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||||||||| | ||||||||||||||||||    
T  28223022 cgggctagccctaacgggtaccgggcttttaagagccgggctaaaaagccct 28222971  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 36240734 - 36240805
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||| ||||||||||||||||    
T  36240734 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggtcgggctaaaaagccct 36240805  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 10261438 - 10261329
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||| | ||||||||||||||   ||||||||| || |||| | |||||    
T  10261438 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggtcaggctaaaaagccctattaaaattcgggct-caatattttagg 10261340  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  10261339 cccaagcccta 10261329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 10440269 - 10440160
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  || |||| |||||||||| ||| ||||||||||||||||   ||||||||| || |||| | |||||    
T  10440269 cgggctacccgcggcccattcgggctagccctaacaggtaccgggcttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttagg 10440171  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  10440170 cccaagcccta 10440160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 17071256 - 17071306
Alignment:
Q  263 ctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    |||||||||||||| ||| |||||||| |||||| |||||||| |||||||    
T  17071256 ctggaaaaattcgggctgaaattattaagcccaaaccctacattttattcg 17071306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 17077328 - 17077378
Alignment:
Q  263 ctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    |||||||||||||| ||| |||||||| |||||| |||||||| |||||||    
T  17077328 ctggaaaaattcgggctgaaattattaagcccaaaccctacattttattcg 17077378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 31743008 - 31742899
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  | ||||| |||||||||| ||||||||||||||||| ||   ||||||||| || |||| | |||||    
T  31743008 cgggctacccgcggcccattcgggctagccctaatgggtaccgggcttttaagggccgggctaaaaagctctattaaaattcgggct-caatattttagg 31742910  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  31742909 cccaagcccta 31742899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 42730064 - 42730102
Alignment:
Q  227 cgggtaacgggcttttacgggccgggctaaaaagccctg 265  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  42730064 cgggtaacgggcttttaagggccgggctgaaaagccctg 42730102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 18258065 - 18258118
Alignment:
Q  226 acgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggact 279  Q
    ||||||| |||||||||| |||||||| |||||||||||   ||||||||||||    
T  18258065 acgggtaccgggcttttaagggccggggtaaaaagccctattaaaattcggact 18258118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 7e-28; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 38976205 - 38976332
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||||||||||  ||||| |||| || ||||||||||  |||||  |||||||||| ||||||||||||||||||| | | ||||||||| ||||||||    
T  38976205 gggctgccgggccgcccgtggcccaaatgggctagccctaacgggctacgggctttttcgggccgggctaaaaagcctttggaaaattcgggctgcaatt 38976304  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    |||||||||||||||||| | |||||||    
T  38976305 attaggcccaagccctacgttttattcg 38976332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 37205995 - 37206122
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||||||||||||||||| ||||  |||||  ||||||| ||||  |||||||||||||||||| |||||||||||||  ||||| ||||  |||||||    
T  37205995 gggctgccgggctacccgtggcccgtacgggtaagcccggtcgggctacgggcttttacgggccgagctaaaaagccctaaaaaaaatcgggttgcaatt 37206094  T
Q  286 attaggcccaagccctacatattattcg 313  Q
     ||||||||||||||||| | |||||||    
T  37206095 tttaggcccaagccctacgttttattcg 37206122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 33908117 - 33908200
Alignment:
Q  218 tagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccct 301  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||| || |||||| |||||    
T  33908117 tagcccgaacgggttacgggcttttacgggccgggctaaaaagccctagaaaaattcgggctccaatttttcggcccaggccct 33908200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 202 - 276
Target Start/End: Complemental strand, 31230384 - 31230310
Alignment:
Q  202 cgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcgg 276  Q
    |||||||| |||||||| ||||| || ||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  31230384 cgtagcccgaacgggctggcccgaactggttacgggattttacgggccgggctaaaaagccctggaaaaattcgg 31230310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 35038728 - 35038836
Alignment:
Q  205 agccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctaca 304  Q
    ||||| |||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||    
T  35038728 agcccgaacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctaca 35038827  T
Q  305 tattattcg 313  Q
    | |||||||    
T  35038828 ttttattcg 35038836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 6955748 - 6955875
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  6955748 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 6955847  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  6955848 attcggcccaagccctacattttattcg 6955875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 9996387 - 9996260
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  9996387 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 9996288  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  9996287 attcggcccaagccctacattttattcg 9996260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 38355982 - 38356109
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  38355982 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 38356081  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  38356082 attcggcccaagccctacattttattcg 38356109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 21731835 - 21731734
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 311  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||    
T  21731835 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttatt 21731736  T
Q  312 cg 313  Q
    ||    
T  21731735 cg 21731734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 6238330 - 6238202
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  6238330 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaat 6238231  T
Q  285 tattaggcccaagccctacatattattcg 313  Q
    |||| |||||||||||||||| |||||||    
T  6238230 tattcggcccaagccctacattttattcg 6238202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 6900040 - 6899912
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  6900040 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaat 6899941  T
Q  285 tattaggcccaagccctacatattattcg 313  Q
    |||| |||||||||||||||| |||||||    
T  6899940 tattcggcccaagccctacattttattcg 6899912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 35838255 - 35838127
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  35838255 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaat 35838156  T
Q  285 tattaggcccaagccctacatattattcg 313  Q
    |||| |||||||||||||||| |||||||    
T  35838155 tattcggcccaagccctacattttattcg 35838127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 36016392 - 36016291
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 311  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || || || || |||||||| |||||||||||||||| |||||    
T  36016392 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaattttgggctccaattattcggcccaagccctacattttatt 36016293  T
Q  312 cg 313  Q
    ||    
T  36016292 cg 36016291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 213 - 314
Target Start/End: Complemental strand, 36866236 - 36866135
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattc 312  Q
    |||||||||||| | | || ||||||||||||||| |||| |||||||||||| |||||||||| ||||| ||||| | ||||| | |||| | ||||||    
T  36866236 cgggctagcccgaatgagttacgggcttttacgggtcgggataaaaagccctgaaaaaattcgggctgcacttattcgacccaaactctacgttttattc 36866137  T
Q  313 ga 314  Q
    ||    
T  36866136 ga 36866135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 10642053 - 10642129
Alignment:
Q  237 gcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||||    
T  10642053 gcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcg 10642129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 24477431 - 24477303
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  24477431 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaat 24477332  T
Q  285 tattaggcccaagccctacatattattcg 313  Q
    |||| ||| |||||||||||| |||||||    
T  24477331 tattcggctcaagccctacattttattcg 24477303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 38986610 - 38986678
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagcccta 302  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| ||| |||| ||  ||||||||||||    
T  38986610 cgggctttttcgggccgggctaaaaagccctagaaaaattcgggctgaaatttttgagcccaagcccta 38986678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 6453133 - 6453030
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaattattaggcccaagccctacatattat 310  Q
    ||||| ||||||  |||||| ||||| ||||||||| ||||||||||||||||    ||||||||| ||||||||||| ||| ||| |||||||| ||||    
T  6453133 acgggttagccctaacgggttacgggtttttacgggtcgggctaaaaagccctcttcaaaattcgggctgcaattattcggcacaaaccctacattttat 6453034  T
Q  311 tcga 314  Q
    ||||    
T  6453033 tcga 6453030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 313
Target Start/End: Original strand, 4699912 - 4700014
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaattattaggcccaagccctacatattat 310  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || |||||||| ||||||| |||||||| ||||    
T  4699912 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaattattcggcccaaaccctacattttat 4700011  T
Q  311 tcg 313  Q
    |||    
T  4700012 tcg 4700014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 26264372 - 26264481
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatta-ttagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  26264372 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caataatttagg 26264470  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  26264471 cccaagcccta 26264481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 28759352 - 28759461
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  28759352 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 28759450  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  28759451 cccaagcccta 28759461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 20122815 - 20122764
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  20122815 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 20122764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 20338469 - 20338592
Alignment:
Q  190 tgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattatta 289  Q
    ||||||||| ||| ||| || |||||||||||||  ||| |   ||||||||| ||| |||||||||||| ||||| |||||||||| |||| |||  |     
T  20338469 tgccgggctgcccttagtccgaacgggctagccctaacgagcttcgggctttttcggaccgggctaaaaatccctgaaaaaattcgggctgctatttatc 20338568  T
Q  290 ggcccaagccctacatattattcg 313  Q
    |||| | ||||||||| |||||||    
T  20338569 ggcctaggccctacattttattcg 20338592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 42860272 - 42860399
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | |||||||||||||| |||||||||| ||||    || ||||| || |||||    
T  42860272 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggctgggctaaaaaaccctcttcaatttcgggctccaatt 42860371  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| ||||||| |||||||| |||||||    
T  42860372 attcggcccaaaccctacattttattcg 42860399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 2466308 - 2466397
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    ||||||||||   ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  2466308 cgggctagccataacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 2466397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 4975760 - 4975870
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 292  Q
    |||||| ||||| |||| || ||||||||||  ||||    ||||||||| ||| ||||||||||||| | | ||||||||||  || ||||||||||||    
T  4975760 cgggctgcccgtggcccgaatgggctagccctaacggactccgggctttttcggaccgggctaaaaagtcttagaaaaattcgagctacaattattaggc 4975859  T
Q  293 ccaagccctac 303  Q
    |||| ||||||    
T  4975860 ccaaaccctac 4975870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 303
Target Start/End: Original strand, 1398370 - 1398434
Alignment:
Q  239 ttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctac 303  Q
    ||||||||||||||| ||||||||||    |||||||| |||| ||| |||||||||||||||||    
T  1398370 ttttacgggccgggccaaaaagccctatttaaattcgggctgccatttttaggcccaagccctac 1398434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 1845540 - 1845488
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    
T  1845540 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccct 1845488  T

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Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 285
Target Start/End: Complemental strand, 3296217 - 3296166
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    |||||||||  ||||||||||||||||||||| || ||||||| ||||||||    
T  3296217 cgggcttttttgggccgggctaaaaagccctgaaacaattcgggctgcaatt 3296166  T

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Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 7949708 - 7949779
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||| ||||    
T  7949708 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccct 7949779  T

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Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 16749082 - 16749011
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||| ||||||||||    
T  16749082 cgggctacccgcggcccattcgggctagccctaacgggtatcgggcttttaagggccgggcaaaaaagccct 16749011  T

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Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 17320497 - 17320426
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  17320497 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggctttttagggccgggctaaaaagccct 17320426  T

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Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 4971315 - 4971357
Alignment:
Q  112 ttgtaaaaatgatagaactttaaaagtcatgccttcaaaacca 154  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||    
T  4971315 ttgtaaaaatgatagaactataaaaatcataccttcaaaacca 4971357  T

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Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 19646960 - 19647010
Alignment:
Q  214 gggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    ||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  19646960 gggctagccctaacgggtagcgggctttttagggccgggctaaaaagccct 19647010  T

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Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 26507331 - 26507293
Alignment:
Q  226 acgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  26507331 acgggtaccgggcttttaagggccgggctaaaaagccct 26507293  T

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Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 39479473 - 39479404
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagcc 262  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||  ||||||||||||||||||    
T  39479473 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggctttttagggccgggctaaaaagcc 39479404  T

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Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 42739369 - 42739448
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    |||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||    
T  42739369 cgggcttttttgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacgttttattcg 42739448  T

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Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 6143035 - 6142935
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 292  Q
    |||||| ||| |||||| |||||||||| ||| | |||| ||||| |||||||||||||||||||||||||||||| ||| ||| ||||||||||| |||    
T  6143035 cgggctgcccttagcccaaacgggctagtccgaaagggttacgggtttttacgggccgggctaaaaagccctggaagaatccgggctgcaattattcggc 6142936  T
Q  293 c 293  Q
    |    
T  6142935 c 6142935  T

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Target: chr8; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 186 - 305
Target Start/End: Complemental strand, 15243920 - 15243801
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    |||||| |||||| ||| ||||||   |||||||||||  |||||  ||||||||| |||| |||||||||||||||||| || ||||||| ||||||||    
T  15243920 gggctggcgggctgcccttagcccgtgcgggctagcccaaacgggctacgggctttaacggtccgggctaaaaagccctgaaagaattcgggctgcaatt 15243821  T
Q  286 attaggcccaagccctacat 305  Q
    ||| |||||| |||||||||    
T  15243820 attcggcccaggccctacat 15243801  T

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Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 2349792 - 2349713
Alignment:
Q  233 acgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||||  ||||||||||||||||||||| |||||||||  ||||||||||| |||||| ||||||||| |||||||    
T  2349792 acgggcttttttgggccgggctaaaaagccctg-aaaaattcgagctgcaattattcggcccaggccctacattttattcg 2349713  T

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Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 30436423 - 30436551
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  30436423 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaat 30436522  T
Q  285 tattaggcccaagccctacatattattcg 313  Q
    |||| |||||||||||||||| |||||||    
T  30436523 tattcggcccaagccctacattttattcg 30436551  T

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Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 35813392 - 35813520
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  35813392 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaat 35813491  T
Q  285 tattaggcccaagccctacatattattcg 313  Q
    |||| |||||||||||||||| |||||||    
T  35813492 tattcggcccaagccctacattttattcg 35813520  T

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Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 236 - 313
Target Start/End: Complemental strand, 3940767 - 3940690
Alignment:
Q  236 ggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    |||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||||    
T  3940767 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcg 3940690  T

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Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 45451728 - 45451856
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||| ||||| ||||||| |||||||||||||| |||    ||||||||  |||||||    
T  45451728 gggcttccgggcggcccgaagcccggacgggctagccctaacgggttacgggtttttacgagccgggctaaaaagtcctcttcaaaattcgagctgcaat 45451827  T
Q  285 tattaggcccaagccctacatattattcg 313  Q
    |||| ||| |||||||||||| |||||||    
T  45451828 tattcggctcaagccctacattttattcg 45451856  T

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Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 3654264 - 3654391
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  ||| |  | |||||||||||||||| |||||||||||||    || ||||| || |||||    
T  3654264 gggcttccgggcagcccgaagcccggacgggctagccctaacgagccaagggcttttacgggccgagctaaaaagccctcttcaatttcgggctccaatt 3654363  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  3654364 attcggcccaagccctacattttattcg 3654391  T

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Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 9201224 - 9201129
Alignment:
Q  218 tagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||| | |||| ||||||||||| || |||||||||||||| ||| || ||||| | ||||||||||| ||||||| |||||| | |||||||    
T  9201224 tagcccgaaagggttacgggcttttatggaccgggctaaaaagctctgaaagaattcaggctgcaattattcggcccaaaccctacgttttattcg 9201129  T

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Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 5927209 - 5927100
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  5927209 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 5927111  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  5927110 cccaagcccta 5927100  T

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Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 6266402 - 6266293
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  6266402 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 6266304  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  6266303 cccaagcccta 6266293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 302
Target Start/End: Complemental strand, 15041446 - 15041357
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  15041446 cgggctagccctaacgggtatcgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatatcttaggcccaagcccta 15041357  T

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Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 24101755 - 24101844
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  24101755 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 24101844  T

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Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 302
Target Start/End: Complemental strand, 26098384 - 26098295
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  26098384 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 26098295  T

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Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 38231735 - 38231824
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  38231735 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 38231824  T

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Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 31894922 - 31895030
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 292  Q
    |||||||||||  ||||   |||| ||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || ||||  ||||||    
T  31894922 cgggctacccgcggcccattcgggttagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatatttaggc 31895020  T
Q  293 ccaagcccta 302  Q
    ||||||||||    
T  31895021 ccaagcccta 31895030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 28968293 - 28968213
Alignment:
Q  233 acgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||||  ||||||||||||||||||||| |||||||| | || | |||||| |||||| ||||| ||| |||||||    
T  28968293 acgggcttttttgggccgggctaaaaagccctgaaaaaattcaggcttctattattcggcccaggccctgcattttattcg 28968213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 11202169 - 11202240
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  11202169 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 11202240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 37819322 - 37819271
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  37819322 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 37819271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 302
Target Start/End: Complemental strand, 40027852 - 40027766
Alignment:
Q  216 gctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    ||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  40027852 gctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 40027766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 302
Target Start/End: Complemental strand, 7161681 - 7161592
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    |||||||||||  ||||||| |||||||||| ||| ||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  7161681 cgggctagccctaacgggtaccgggcttttaagggacgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 7161592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 41644164 - 41644273
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    ||||||||||| |||||   |||| ||||||  ||||||| |||||||||| |||||||||||||||| |||   ||||||||| || |||| | |||||    
T  41644164 cgggctacccgcagcccattcgggttagccctaacgggtaccgggcttttaagggccgggctaaaaaggcctattaaaattcgggct-caatattttagg 41644262  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  41644263 cccaagcccta 41644273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 41827541 - 41827650
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   ||||||||||   ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  41827541 cgggctacccgcggcccattcgggctagccttaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 41827639  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  41827640 cccaagcccta 41827650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 5913409 - 5913354
Alignment:
Q  209 ctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||||||  ||||||| |||||||||  |||||| |||||||||||||    
T  5913409 ctaacgggctagccctaacgggtatcgggctttttagggccgagctaaaaagccct 5913354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 302
Target Start/End: Complemental strand, 7433517 - 7433431
Alignment:
Q  216 gctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    ||||||||  ||||||  |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  7433517 gctagccctaacgggtgccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 7433431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 27640026 - 27640077
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  |||| || |||||||||| ||||||||||||||||||||    
T  27640026 cgggctagccctaacggataccgggcttttaagggccgggctaaaaagccct 27640077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 24476390 - 24476440
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccc 263  Q
    |||||||||||  ||||||| ||||| |||| |||||||||||||||||||    
T  24476390 cgggctagccctaacgggtaccgggcatttaagggccgggctaaaaagccc 24476440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 41395942 - 41395833
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| ||| |||||| ||| ||||||||||||||||   ||||||||| || |||| | |||||    
T  41395942 cgggctacccgcggcccattcgggctagccctaacgggtaccggacttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttagg 41395844  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  41395843 cccaagcccta 41395833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 44679165 - 44679214
Alignment:
Q  215 ggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||  ||||||| |||||||||| || |||||||||||||||||    
T  44679165 ggctagccctaacgggtaccgggcttttaaggaccgggctaaaaagccct 44679214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 46237603 - 46237682
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  46237603 cgggctttttcgggccgagctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctatattttattcg 46237682  T

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Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 186 - 302
Target Start/End: Original strand, 31489462 - 31489578
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    |||||||||||||||||| ||||| |||||||||||||  ||||||||||||| ||| ||||||||| |||||||||| | |   |||||| ||| ||||    
T  31489462 gggctgccgggctacccgaagcccgaacgggctagccctaacgggtaacgggccttttcgggccgggttaaaaagcccggaatttattcgggctgtaatt 31489561  T
Q  286 attaggcccaagcccta 302  Q
     ||||||||||||||||    
T  31489562 tttaggcccaagcccta 31489578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 9660784 - 9660911
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  9660784 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 9660883  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  9660884 attcggcccaagccctacattttattcg 9660911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 301
Target Start/End: Complemental strand, 32057669 - 32057588
Alignment:
Q  220 gcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccct 301  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||| ||||||||||| || ||||| || |||||| |||||    
T  32057669 gcccgaacgggttacgggcttttacggaccgggctaaaaagccctagaaaaattcgggctccaatttttcggcccaggccct 32057588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 12745725 - 12745597
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  12745725 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaat 12745626  T
Q  285 tattaggcccaagccctacatattattcg 313  Q
    |||| |||||||||||||||| |||||||    
T  12745625 tattcggcccaagccctacattttattcg 12745597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 12756714 - 12756586
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  12756714 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaat 12756615  T
Q  285 tattaggcccaagccctacatattattcg 313  Q
    |||| |||||||||||||||| |||||||    
T  12756614 tattcggcccaagccctacattttattcg 12756586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 313
Target Start/End: Complemental strand, 33189145 - 33189046
Alignment:
Q  214 gggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||||    
T  33189145 gggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcg 33189046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 42763210 - 42763337
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | |||||||||||| |||||||||||||||||    || ||||| || |||||    
T  42763210 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacggaccgggctaaaaagccctcttcaatttcgggcttcaatt 42763309  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  42763310 attcggcccaagccctacattttattcg 42763337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 43781128 - 43781255
Alignment:
Q  186 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 285  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||| ||||    || ||||| || |||||    
T  43781128 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaaaccctcttcaatttcgggctccaatt 43781227  T
Q  286 attaggcccaagccctacatattattcg 313  Q
    ||| |||||||||||||||| |||||||    
T  43781228 attcggcccaagccctacattttattcg 43781255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 313
Target Start/End: Original strand, 45757225 - 45757326
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 311  Q
    ||||||||||||  |||||  | ||||||||| ||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||    
T  45757225 acgggctagccctaacgggccaagggcttttatgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttatt 45757324  T
Q  312 cg 313  Q
    ||    
T  45757325 cg 45757326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 5115035 - 5114926
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 292  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| ||  |  | ||||||    
T  5115035 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggcttaatattttaggc 5114936  T
Q  293 ccaagcccta 302  Q
    ||||||||||    
T  5114935 ccaagcccta 5114926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 302
Target Start/End: Complemental strand, 19406753 - 19406667
Alignment:
Q  216 gctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    ||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  19406753 gctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 19406667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 39995470 - 39995521
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  39995470 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 39995521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 276
Target Start/End: Complemental strand, 45039118 - 45039035
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcgg 276  Q
    |||||| ||| |||||| | ||||| |||||  ||||||  ||||||||| |||| ||||||||||| ||||||||||||||||    
T  45039118 cgggctgcccttagcccgagcgggccagcccaaacgggttgcgggctttttcgggtcgggctaaaaaaccctggaaaaattcgg 45039035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 48470436 - 48470515
Alignment:
Q  234 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| |||| |||  | ||||||  |||||||| |||||||    
T  48470436 cgggctttttcgggccgggctaaaaagtcctgaaaaaattcgggctgctatttatcggcccagaccctacattttattcg 48470515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 1858786 - 1858875
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    ||||| |||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  1858786 cgggccagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 1858875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 24683447 - 24683489
Alignment:
Q  112 ttgtaaaaatgatagaactttaaaagtcatgccttcaaaacca 154  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  24683447 ttgtaaaaatgatagaactttaaaaatcataccttcaaaacca 24683489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 30723430 - 30723321
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||| ||||   ||||||||| || |||| | |||||    
T  30723430 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccctattaaaattcgggct-caatattttagg 30723332  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  30723331 cccaagcccta 30723321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 41310519 - 41310628
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||  |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  41310519 cgggctacccgcggcccattcgggctagccctaacgggtgccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 41310617  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  41310618 cccaagcccta 41310628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 48812530 - 48812639
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||| ||||||||||||||||   ||||||||| || |||| | |||||    
T  48812530 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttagg 48812628  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  48812629 cccaagcccta 48812639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 28199324 - 28199276
Alignment:
Q  216 gctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    ||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  28199324 gctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 28199276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 303
Target Start/End: Original strand, 15699330 - 15699389
Alignment:
Q  244 cgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctac 303  Q
    |||||||||| |||||||||||   |||||||| |||| ||| |||||||||||||||||    
T  15699330 cgggccgggccaaaaagccctgtttaaattcgggctgccatttttaggcccaagccctac 15699389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 276
Target Start/End: Original strand, 21088540 - 21088603
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcgg 276  Q
    |||||||||||  ||||||| ||||||||||  ||||||||||||||| ||||  |||||||||    
T  21088540 cgggctagccctaacgggtaccgggcttttaaaggccgggctaaaaaggcctgttaaaattcgg 21088603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 44922301 - 44922250
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  44922301 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccct 44922250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 48913710 - 48913639
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| ||| |||||| ||||||||||||||||||||    
T  48913710 cgggctacccgcggcccattcgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccct 48913639  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 50511991 - 50512042
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  50511991 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccct 50512042  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 42102298 - 42102249
Alignment:
Q  215 ggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||  ||||||| || ||||||| ||||||||||||||||||||    
T  42102298 ggctagccctaacgggtaccgagcttttaagggccgggctaaaaagccct 42102249  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 261
Target Start/End: Original strand, 40601724 - 40601792
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagc 261  Q
    |||||||||||  ||||   |||||||||||  | ||||| |||||||||| |||||||||||||||||    
T  40601724 cgggctacccgcggcccattcgggctagccctaatgggtaccgggcttttaagggccgggctaaaaagc 40601792  T

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Target: scaffold0295 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 6273 - 6186
Alignment:
Q  226 acgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 313  Q
    |||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||||| ||||||||| |||||||    
T  6273 acgggttacggacttttgcgggccgggctaaaaagccctgaaaaaattcggactgcaattattccgcccaggccctacattttattcg 6186  T

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Target: scaffold0219 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 212 - 313
Target Start/End: Original strand, 16622 - 16723
Alignment:
Q  212 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 311  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||    
T  16622 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctacaattattcggcccaagccctacattttatt 16721  T
Q  312 cg 313  Q
    ||    
T  16722 cg 16723  T

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Target: scaffold0664 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 7765 - 7874
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 291  Q
    |||||||||||  ||||   ||||| |||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  7765 cgggctacccgcggcccattcgggcaagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 7863  T
Q  292 cccaagcccta 302  Q
    |||||||||||    
T  7864 cccaagcccta 7874  T

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Target: scaffold1318 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 1076 - 1005
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||| ||||||    
T  1076 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaagagccct 1005  T

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Target: scaffold0124 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 40038 - 40109
Alignment:
Q  193 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||   |||||||||||  ||||||| | |||||||| ||||||||||||||||||||    
T  40038 cgggctacccgcggcccattcgggctagccctaacgggtaccaggcttttaagggccgggctaaaaagccct 40109  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 27733 - 27682
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||||||||| ||||||||| ||||||||||    
T  27733 cgggctagccctaacgggtaccgggcttttaagggccgggcgaaaaagccct 27682  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 56340 - 56289
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 264  Q
    |||||||||||  ||||||| |||| ||||| ||||||||||||||||||||    
T  56340 cgggctagccctaacgggtaccgggattttaagggccgggctaaaaagccct 56289  T

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Target: scaffold1243 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 302
Target Start/End: Complemental strand, 2122 - 2033
Alignment:
Q  213 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    |||||||||||  ||||||| ||||||| || ||| ||||||||| ||||||   |||||||||||| |||| | ||||||||||||||||    
T  2122 cgggctagccctaacgggtaccgggcttataagggtcgggctaaatagccctattaaaattcggact-caatattttaggcccaagcccta 2033  T

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Target: scaffold0173 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 21967 - 22034
Alignment:
Q  235 gggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 302  Q
    ||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  21967 gggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 22034  T

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