View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1051_low_6 (Length: 329)
Name: NF1051_low_6
Description: NF1051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1051_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 84 - 230
Target Start/End: Original strand, 3607655 - 3607801
Alignment:
| Q |
84 |
ttatgtgatggttgaattgtatcaaatagtcacttcactataaagaatcatataggtacaaattcacaagcaacttaaaaaattcacaaacaatcgtaac |
183 |
Q |
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| T |
3607655 |
ttatgtgatggttgaattgtatcaaatagtcacttcactataaagaatcatataggtacaaattcacaagcaacttaaaaaattcacaaacaatcgtaac |
3607754 |
T |
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| Q |
184 |
caaatgttagaagaaggagaagagattgaataatgtggtgaactata |
230 |
Q |
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| T |
3607755 |
caaatgttagaagaaggagaagagattgaataatgtggtgaactata |
3607801 |
T |
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