View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10521_low_18 (Length: 306)
Name: NF10521_low_18
Description: NF10521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10521_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 19 - 293
Target Start/End: Original strand, 37563485 - 37563757
Alignment:
| Q |
19 |
agtttgtgtgtgtatctttctctctaggggattagaataaagggaagtctactttaatgtttaatctcagtcgtaaaagaaatgtgactaacaatgatac |
118 |
Q |
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| T |
37563485 |
agtttgtgtgtgtatctttctctctaggtgattagaataaagggaagtctactttaatgtttaatctcagtcgtaaaagaaatgtgactaacaatgatac |
37563584 |
T |
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| Q |
119 |
tttaactccaatcaagtaaattttctctgcaagtgtgaagttatacttctttcaaaattttgaaccaatttcatgattatttttctcttttatttaactt |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
37563585 |
tttaactccaatcaagtaaattttctctgcaagtgtgaagttatacttctttcaaaattttgaaccaatttcatgatta--tttctcttttatttaactt |
37563682 |
T |
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| Q |
219 |
aacaatatatgttgttcatttgacatttgtatgtttatgataccaagaaatattcatttgttctttcttttatct |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37563683 |
aacaatatatgttgttcatttgacatttgtatgtttatgataccaagaaatattcatttgttctttcttttatct |
37563757 |
T |
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