View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10521_low_24 (Length: 283)
Name: NF10521_low_24
Description: NF10521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10521_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 45046224 - 45045976
Alignment:
| Q |
19 |
gttcaaaccctcgccaccatcaaaagaaagtttgcacctctacctcaattcccgatctcacacttctaacatctattgatcataaaatttgcataaaatg |
118 |
Q |
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| T |
45046224 |
gttcaaactctgaccaccaccaaaaaaaagtttgcacctctacctcaattcccgatctcacacttctaacatctattgatcataaaatttgcataaaatg |
45046125 |
T |
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| Q |
119 |
tgacatttacttcgatagctgcttttatccatgcttattttattatatttttaataacacccccttttatcaatctgaataggaaatcgataatcaaatt |
218 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
45046124 |
tgacatttccttcgatagctgcttttatccatgcttattttattatatttttaataacacccccttttatcaatctgaataggaaaccgataatcaaatt |
45046025 |
T |
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| Q |
219 |
aaggaaaattgtttctaggattcgtttctcataaataggcttacaatgt |
267 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
45046024 |
aaggaaaattgtttctaggattcgtttctcataactaggcttacaatgt |
45045976 |
T |
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