View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10521_low_30 (Length: 263)
Name: NF10521_low_30
Description: NF10521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10521_low_30 |
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Alignment Details
Target: chr2 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 16 - 253
Target Start/End: Complemental strand, 2079561 - 2079324
Alignment:
| Q |
16 |
actaccacacttggcatacatatttataagtgcattgcacacaaagatgctaaaaccaattccaaatttcaagatgtagccatggattacaccaccatgc |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2079561 |
actaccacacttggcatacatatttataagtgcattgcacacaaagatgctaaaaccaattccaaatttcaagatgtagccatggattacaccaccatgc |
2079462 |
T |
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| Q |
116 |
ttaaatgaagataagtttgtacatgcagatatcactgccaataaagttacatagtttggttcagtttcttcagtcctcatcttattaaaaagcttcaaag |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2079461 |
ttaaatgaagataagtttgtacatgcagatatcactgccaataaagttacatagtttggttcagtttcttcagtcctcatcttattaaaaagcttcaaag |
2079362 |
T |
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| Q |
216 |
ctttgtcgctctctcctcttcgagcatagctccctatg |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
2079361 |
ctttgtcgctctctcctcttcgagcatagctccctatg |
2079324 |
T |
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