View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10521_low_35 (Length: 249)

Name: NF10521_low_35
Description: NF10521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10521_low_35
NF10521_low_35
[»] chr4 (9 HSPs)
chr4 (1-236)||(18108499-18108729)
chr4 (1-79)||(14557025-14557103)
chr4 (1-79)||(15153713-15153791)
chr4 (1-79)||(13277316-13277394)
chr4 (13-79)||(13292706-13292772)
chr4 (1-44)||(14022524-14022567)
chr4 (1-47)||(3078040-3078086)
chr4 (1-38)||(14714241-14714278)
chr4 (1-38)||(14775921-14775958)
[»] chr3 (14 HSPs)
chr3 (1-236)||(14683243-14683473)
chr3 (1-239)||(7341556-7341795)
chr3 (1-239)||(7396302-7396541)
chr3 (1-138)||(13299559-13299694)
chr3 (1-138)||(13310217-13310352)
chr3 (1-90)||(10139710-10139800)
chr3 (1-90)||(10171077-10171167)
chr3 (1-129)||(10778896-10779021)
chr3 (1-129)||(10792414-10792539)
chr3 (1-138)||(11887164-11887298)
chr3 (1-44)||(12491913-12491956)
chr3 (1-47)||(12844665-12844711)
chr3 (1-44)||(13023870-13023913)
chr3 (1-44)||(12021570-12021613)
[»] chr7 (11 HSPs)
chr7 (3-236)||(14323804-14324037)
chr7 (3-236)||(14345997-14346230)
chr7 (1-239)||(18115320-18115555)
chr7 (1-239)||(18141888-18142123)
chr7 (3-236)||(14035967-14036200)
chr7 (1-136)||(44277764-44277900)
chr7 (1-66)||(1978316-1978381)
chr7 (1-90)||(18174959-18175048)
chr7 (1-44)||(11989493-11989536)
chr7 (1-62)||(15758537-15758598)
chr7 (1-47)||(18752644-18752690)
[»] chr8 (15 HSPs)
chr8 (1-236)||(16668052-16668287)
chr8 (1-232)||(17426194-17426423)
chr8 (1-136)||(20193252-20193388)
chr8 (28-238)||(1735109-1735315)
chr8 (1-66)||(22352111-22352176)
chr8 (1-62)||(25389080-25389141)
chr8 (13-79)||(12821332-12821398)
chr8 (1-44)||(22064583-22064626)
chr8 (1-47)||(41438942-41438988)
chr8 (1-47)||(18735364-18735410)
chr8 (1-47)||(22698196-22698242)
chr8 (1-47)||(29708264-29708310)
chr8 (1-47)||(15337305-15337351)
chr8 (1-47)||(15426370-15426416)
chr8 (1-47)||(15517674-15517720)
[»] chr2 (16 HSPs)
chr2 (1-230)||(24967339-24967568)
chr2 (20-236)||(24954144-24954360)
chr2 (1-90)||(23190349-23190438)
chr2 (1-90)||(23203965-23204054)
chr2 (1-90)||(23611604-23611693)
chr2 (1-90)||(22633774-22633863)
chr2 (1-90)||(22648523-22648612)
chr2 (1-87)||(23615209-23615295)
chr2 (1-62)||(24896611-24896672)
chr2 (1-44)||(39227548-39227591)
chr2 (1-47)||(16664777-16664823)
chr2 (1-47)||(22880937-22880983)
chr2 (1-47)||(37130394-37130441)
chr2 (2-47)||(10480498-10480544)
chr2 (1-47)||(31817908-31817954)
chr2 (1-46)||(22593735-22593780)
[»] scaffold0101 (2 HSPs)
scaffold0101 (1-236)||(46364-46597)
scaffold0101 (1-236)||(51002-51235)
[»] scaffold0740 (1 HSPs)
scaffold0740 (1-236)||(5434-5667)
[»] chr1 (15 HSPs)
chr1 (1-236)||(22086205-22086438)
chr1 (1-239)||(41368757-41368991)
chr1 (1-239)||(41383664-41383898)
chr1 (1-62)||(31845755-31845816)
chr1 (1-62)||(22809160-22809221)
chr1 (1-44)||(21310725-21310768)
chr1 (1-47)||(21168439-21168485)
chr1 (1-47)||(29305211-29305257)
chr1 (1-66)||(1528746-1528811)
chr1 (1-44)||(21076556-21076599)
chr1 (1-84)||(27561854-27561937)
chr1 (1-41)||(23511609-23511649)
chr1 (1-47)||(4229954-4230000)
chr1 (13-47)||(21137648-21137682)
chr1 (1-47)||(50826372-50826418)
[»] scaffold0130 (3 HSPs)
scaffold0130 (1-236)||(28625-28842)
scaffold0130 (1-90)||(39805-39894)
scaffold0130 (1-62)||(29437-29498)
[»] scaffold0253 (1 HSPs)
scaffold0253 (1-137)||(15419-15555)
[»] scaffold0108 (2 HSPs)
scaffold0108 (1-90)||(22973-23062)
scaffold0108 (1-90)||(44149-44238)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-90)||(43215-43304)
[»] chr6 (11 HSPs)
chr6 (1-90)||(23431860-23431949)
chr6 (1-82)||(23490908-23490989)
chr6 (1-82)||(23496506-23496587)
chr6 (4-66)||(16209767-16209829)
chr6 (1-79)||(30755623-30755701)
chr6 (1-47)||(19405880-19405926)
chr6 (1-62)||(1557777-1557838)
chr6 (1-47)||(18258202-18258248)
chr6 (1-79)||(19025484-19025562)
chr6 (1-79)||(19038527-19038605)
chr6 (1-47)||(11794094-11794140)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-90)||(58447-58536)
[»] scaffold0270 (2 HSPs)
scaffold0270 (1-79)||(8175-8253)
scaffold0270 (1-79)||(15305-15383)
[»] scaffold0241 (1 HSPs)
scaffold0241 (1-66)||(25051-25116)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-90)||(41281-41370)
[»] scaffold0304 (1 HSPs)
scaffold0304 (1-79)||(5876-5954)
[»] scaffold0423 (1 HSPs)
scaffold0423 (1-62)||(1706-1767)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-62)||(118463-118524)
scaffold0026 (1-62)||(142313-142374)
[»] scaffold0023 (5 HSPs)
scaffold0023 (1-66)||(62115-62180)
scaffold0023 (1-66)||(84976-85041)
scaffold0023 (1-57)||(71302-71358)
scaffold0023 (1-47)||(6753-6799)
scaffold0023 (1-47)||(22608-22654)
[»] scaffold0019 (2 HSPs)
scaffold0019 (1-62)||(151497-151558)
scaffold0019 (1-62)||(162056-162117)
[»] chr5 (8 HSPs)
chr5 (1-66)||(20506413-20506478)
chr5 (1-66)||(21504611-21504676)
chr5 (1-66)||(21530278-21530343)
chr5 (1-66)||(21982707-21982772)
chr5 (1-66)||(26274191-26274256)
chr5 (1-45)||(40932874-40932918)
chr5 (1-47)||(20024547-20024593)
chr5 (2-47)||(18156137-18156182)
[»] scaffold0323 (1 HSPs)
scaffold0323 (1-83)||(4469-4551)
[»] scaffold0001 (5 HSPs)
scaffold0001 (1-66)||(25185-25250)
scaffold0001 (1-66)||(28683-28748)
scaffold0001 (1-66)||(115442-115507)
scaffold0001 (1-62)||(390056-390117)
scaffold0001 (13-79)||(130005-130071)
[»] scaffold0358 (1 HSPs)
scaffold0358 (3-62)||(15689-15748)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-47)||(45330-45376)
[»] scaffold0282 (1 HSPs)
scaffold0282 (1-62)||(8855-8916)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-66)||(26873-26938)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-66)||(2402-2467)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-66)||(18595-18660)
scaffold0021 (1-66)||(28126-28191)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-46)||(129152-129197)
[»] scaffold0216 (1 HSPs)
scaffold0216 (1-44)||(20067-20110)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-47)||(32065-32111)
[»] scaffold0059 (2 HSPs)
scaffold0059 (1-47)||(68204-68250)
scaffold0059 (1-47)||(76309-76355)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-47)||(30579-30625)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-47)||(200111-200157)
[»] scaffold0107 (1 HSPs)
scaffold0107 (1-62)||(29097-29158)
[»] scaffold0168 (1 HSPs)
scaffold0168 (3-47)||(1503-1547)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-64)||(44357-44420)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-44)||(33434-33477)
[»] scaffold0509 (2 HSPs)
scaffold0509 (1-47)||(1316-1362)
scaffold0509 (1-47)||(7744-7790)
[»] scaffold0239 (1 HSPs)
scaffold0239 (1-47)||(17090-17136)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-47)||(8974-9020)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-47)||(102100-102146)
[»] scaffold0770 (1 HSPs)
scaffold0770 (1-47)||(3796-3842)
[»] scaffold0480 (1 HSPs)
scaffold0480 (1-47)||(3685-3731)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-43)||(14240-14282)
[»] scaffold0063 (1 HSPs)
scaffold0063 (1-47)||(70628-70674)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-38)||(63772-63809)
[»] scaffold0504 (1 HSPs)
scaffold0504 (1-41)||(719-759)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-41)||(25848-25888)


Alignment Details
Target: chr4 (Bit Score: 129; Significance: 7e-67; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 18108729 - 18108499
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattc-aaaatcgaaaaatagtcgt 99  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||||||| ||| ||| |||    
T  18108729 aattgtgacccttttttcctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgattcaaaaatcg-aaactagccgt 18108631  T
Q  100 tccaaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcg 199  Q
    ||  || |||||||||||||||||| |||||||||||||||||     |||||| ||||||||| |||| ||| | || |||||||||||||||||||||    
T  18108630 tcacaaactagccgtttgctaaccgcttggtcttatccacaag-----aagagcgcgtcgacaacttcttttatccgtcgaactaaaaacaacttcttcg 18108536  T
Q  200 attcttgctgaagtagacttgtatttttcgatggatt 236  Q
    |||| |||||||||| |||||||||||||||||||||    
T  18108535 attcctgctgaagtacacttgtatttttcgatggatt 18108499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 14557025 - 14557103
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgatt 79  Q
    ||||||||||  ||||  ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||    
T  14557025 aattgtgacctgttttttctaagaaaaactactatttatacaaatagtcctataactacctaatcatatctgttcgatt 14557103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 15153713 - 15153791
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgatt 79  Q
    ||||||||||  ||||  ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||    
T  15153713 aattgtgacctgttttttctaagaaaaactactatttatacaaatagtcctataactacctaatcatatctgttcgatt 15153791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13277316 - 13277394
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgatt 79  Q
    ||||||||||  |||| |||||||||||||||||||||||||||||  ||||||||| ||| |||| |||| |||||||    
T  13277316 aattgtgacctgtttttcctaagaaaaactactatttatacaaataatcctataactgcctgatcatatctgttcgatt 13277394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 13292706 - 13292772
Alignment:
Q  13 ttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgatt 79  Q
    |||| |||||||||||||||||||||||||||||  ||||||||| ||| |||| |||| |||||||    
T  13292706 tttttcctaagaaaaactactatttatacaaataatcctataactgcctgatcatatctgttcgatt 13292772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14022524 - 14022567
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaa 44  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  14022524 aattgtgacccttttttcctaaaaaaaactactatttatacaaa 14022567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3078040 - 3078086
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||    
T  3078040 aattgtgaccttttttttctaagaaaaactactatttatacaaatag 3078086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14714241 - 14714278
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactattta 38  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  14714241 aattgtgacccgtttttcctaagaaaaactactattta 14714278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14775921 - 14775958
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactattta 38  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  14775921 aattgtgacccgtttttcctaagaaaaactactattta 14775958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 14683243 - 14683473
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattc-aaaatcgaaaaatagtcgt 99  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||||||| ||| ||| |||    
T  14683243 aattgtgacccttttttcctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgattcaaaaatcg-aaactagccgt 14683341  T
Q  100 tccaaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcg 199  Q
    ||  || |||||||||||||||||| |||||||||||||||||     |||||| ||||||||| |||| ||| | || ||||||||||||||||||||     
T  14683342 tcacaaactagccgtttgctaaccgcttggtcttatccacaag-----aagagcgcgtcgacaacttcttttatccgtcgaactaaaaacaacttcttca 14683436  T
Q  200 attcttgctgaagtagacttgtatttttcgatggatt 236  Q
    |||| |||||||||| |||||||||||||||||||||    
T  14683437 attcctgctgaagtacacttgtatttttcgatggatt 14683473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 7341556 - 7341795
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgtt 100  Q
    |||||||||| ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||  |||| |||||||||||||||||||  ||| ||||    
T  7341556 aattgtgacctttttttcctaagaaaaactactatttatacagatagtcctataactacctaattgcatcctttcgattcaaaatcgaaac-tagccgtt 7341654  T
Q  101 cca--aagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttc 198  Q
     ||  || |||||||||||||||| | |||| |||||||   |||||| |||||| ||||||||| |||| | | | || |||||| ||||||  | |||    
T  7341655 tcacaaaactagccgtttgctaactgcttggccttatccgtgagacctaaagagcgcgtcgacaacttctttcatccgtcgaactagaaacaatgtattc 7341754  T
Q  199 gattcttgctgaagtagacttgtatttttcgatggattctt 239  Q
    ||||| |||||||||| | ||||||||||||||||||||||    
T  7341755 gattcctgctgaagtacatttgtatttttcgatggattctt 7341795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 7396302 - 7396541
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgtt 100  Q
    |||||||||| ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||  |||| |||||||||||||||||||  ||| ||||    
T  7396302 aattgtgacctttttttcctaagaaaaactactatttatacagatagtcctataactacctaattgcatcctttcgattcaaaatcgaaac-tagccgtt 7396400  T
Q  101 cca--aagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttc 198  Q
     ||  || |||||||||||||||| | |||| |||||||   |||||| |||||| ||||||||| |||| | | | || |||||| ||||||  | |||    
T  7396401 tcacaaaactagccgtttgctaactgcttggccttatccgtgagacctaaagagcgcgtcgacaacttctttcatccgtcgaactagaaacaatgtattc 7396500  T
Q  199 gattcttgctgaagtagacttgtatttttcgatggattctt 239  Q
    ||||| |||||||||| | ||||||||||||||||||||||    
T  7396501 gattcctgctgaagtacatttgtatttttcgatggattctt 7396541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 13299559 - 13299694
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgtt 100  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||||||||| |||  ||||||||||||||||||  ||| ||||    
T  13299559 aattgtgacccctttttcctaagaaaaactactatttatacagatagtcctataactacctaatcatatccgttcgattcaaaatcgaaac-tagccgtt 13299657  T
Q  101 ccaaagctagccgtttgctaaccgtttggtcttatcca 138  Q
      ||| |||||||||||||||| | ||| |||||||||    
T  13299658 tgaaa-ctagccgtttgctaactgcttgatcttatcca 13299694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 13310217 - 13310352
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgtt 100  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||||||||| |||  ||||||||||||||||||  ||| ||||    
T  13310217 aattgtgacccctttttcctaagaaaaactactatttatacagatagtcctataactacctaatcatatccgttcgattcaaaatcgaaac-tagccgtt 13310315  T
Q  101 ccaaagctagccgtttgctaaccgtttggtcttatcca 138  Q
      ||| |||||||||||||||| | ||| |||||||||    
T  13310316 tgaaa-ctagccgtttgctaactgcttgatcttatcca 13310352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 10139800 - 10139710
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcga-ttcaaaatcgaaa 90  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||| |||||| |||| ||||| |||||||||||||    
T  10139800 aattgtgacccgtttttcctaagaaaaactactatttatacaaatagtcctataactacttaatcatatctgttcgatttcaaaatcgaaa 10139710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 10171167 - 10171077
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcga-ttcaaaatcgaaa 90  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||||| ||||||||||| |||||| |||| ||||| |||||||||||||    
T  10171167 aattgtgacccgtttttcctaagaaaaactactatttacacaaatagtcctataactacttaatcatatctgttcgatttcaaaatcgaaa 10171077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 10779021 - 10778896
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaa-ctactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgt 99  Q
    |||||||||||||||||  ||||||||| |||||||||||||| |||| ||| |||||||||||||  ||| ||||||||| |||||| ||| ||| |||    
T  10779021 aattgtgaccctttttct-taagaaaaaactactatttatacagatagtcctgtaactacctaatcctatc-tttcgattc-aaatcg-aaactagccgt 10778926  T
Q  100 tccaaagctagccgtttgctaaccgtttgg 129  Q
    || ||| |||||||||||||||||| ||||    
T  10778925 tcgaaaactagccgtttgctaaccgcttgg 10778896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 10792539 - 10792414
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaa-ctactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgt 99  Q
    |||||||||||||||||  ||||||||| |||||||||||||| |||| ||| |||||||||||||  ||| ||||||||| |||||| ||| ||| |||    
T  10792539 aattgtgaccctttttct-taagaaaaaactactatttatacagatagtcctgtaactacctaatcctatc-tttcgattc-aaatcg-aaactagccgt 10792444  T
Q  100 tccaaagctagccgtttgctaaccgtttgg 129  Q
    || ||| |||||||||||||||||| ||||    
T  10792443 tcgaaaactagccgtttgctaaccgcttgg 10792414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 11887298 - 11887164
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaa-ctactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgt 99  Q
    |||||||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||| || |||  ||| |||| |||||| | | ||| |||    
T  11887298 aattgtgaccctttttcc-taagaaaaaactactatttatacagatagtcctataactacctaaacatatc-cttcaattc-aaatcg-agactagccgt 11887203  T
Q  100 tccaaagctagccgtttgctaaccgtttggtcttatcca 138  Q
    || ||| |||||||||||||||||| ||||  |||||||    
T  11887202 tcgaaaactagccgtttgctaaccgcttggctttatcca 11887164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12491956 - 12491913
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaa 44  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  12491956 aattgtgacccttttttcctaagaaaaactactatttatacaaa 12491913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12844665 - 12844711
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  12844665 aattgtgacccattttccctaagaaaaactactatttatataaatag 12844711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13023913 - 13023870
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaa 44  Q
    |||||||||||||||| |||||||||||||||| ||||||||||    
T  13023913 aattgtgacccttttttcctaagaaaaactactttttatacaaa 13023870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12021570 - 12021613
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaa 44  Q
    ||||||||||  |||| |||||||||||||||||||||||||||    
T  12021570 aattgtgacctctttttcctaagaaaaactactatttatacaaa 12021613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 14323804 - 14324037
Alignment:
Q  3 ttgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgttc- 101  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| ||| |||||||||||||||||| |||||||||||||||| ||| ||| |||||     
T  14323804 ttgtgacccttttttcctaagaaaaactactatttatacagatagtcctgtaactacctaatcacatcctttcgattcaaaatcg-aaactagccgttca 14323902  T
Q  102 caaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcgat 201  Q
    |||| |||||||||||||||| | |||||||||||| |||||||| |||||| ||||||||| |||| | | | || |||||| ||||||| ||||||||    
T  14323903 caaaactagccgtttgctaactgcttggtcttatccgcaagacctgaagagcgcgtcgacaacttctttcatccgtcgaactagaaacaacgtcttcgat 14324002  T
Q  202 tcttgctgaagtagacttgtatttttcgatggatt 236  Q
    || |||||||| | | ||||||||||| |||||||    
T  14324003 tcctgctgaagcacatttgtatttttcaatggatt 14324037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 14345997 - 14346230
Alignment:
Q  3 ttgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgttc- 101  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||||||| |||| ||| |||||     
T  14345997 ttgtgacccttttttcctaagaaaaactactatttatacagatagtcctgtaactacctaatcacatcctttcgattcaaaatc-aaaactagccgttca 14346095  T
Q  102 caaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcgat 201  Q
    |||| ||||| |||||||||| | |||||||||||| |||||||| |||||| ||||||||| |||| | | | || |||||| ||||||| ||||||||    
T  14346096 caaaactagctgtttgctaactgcttggtcttatccgcaagacctgaagagcgcgtcgacaacttctttcatccgtcgaactagaaacaacgtcttcgat 14346195  T
Q  202 tcttgctgaagtagacttgtatttttcgatggatt 236  Q
    || |||||||| | | |||||||||||||||||||    
T  14346196 tcctgctgaagcacatttgtatttttcgatggatt 14346230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 18115320 - 18115555
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgtt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||| ||| ||||| ||    
T  18115320 aattgtgacccttttttcctaagaaaaactactatttatacagatagccctataactacctaatcatatcctttcgattcaaaatcg-aaactagtcctt 18115418  T
Q  101 c-caaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcg 199  Q
    |  ||| |||| ||||||||||||| |||||||||||||||||| ||   |||| ||||||  | |||| ||| | |  |||||||||||| ||||||||    
T  18115419 cataaaactagtcgtttgctaaccgcttggtcttatccacaagatct---gagcgcgtcgatgacttcttttatccgacgaactaaaaacaccttcttcg 18115515  T
Q  200 attcttgctgaagtagacttgtatttttcgatggattctt 239  Q
    |||| |||||||||| ||||| ||||||||||||||||||    
T  18115516 attcctgctgaagtaaacttgcatttttcgatggattctt 18115555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 18141888 - 18142123
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgtt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||| ||| ||| ||||    
T  18141888 aattgtgacccttttttcctaagaaaaactactatttatacagatagccctataactacctaatcatatcctttcgattcaaaatcg-aaactagccgtt 18141986  T
Q  101 c-caaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcg 199  Q
    |  ||| |||||||||||| ||||| |||||||||||||||||||||   |||  ||||||  | |||| ||| | |  |||||||||||| ||||||||    
T  18141987 cataaaactagccgtttgcaaaccgcttggtcttatccacaagacct---gagtgcgtcgatgacttcttttatccgacgaactaaaaacaccttcttcg 18142083  T
Q  200 attcttgctgaagtagacttgtatttttcgatggattctt 239  Q
    |||| |||||||||| ||||| ||||||||||||||||||    
T  18142084 attcctgctgaagtaaacttgcatttttcgatggattctt 18142123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 14035967 - 14036200
Alignment:
Q  3 ttgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgttc- 101  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||||||| |||| ||| |||||     
T  14035967 ttgtgacccttttttcctaagaaaaactactatttatacagatagtcctgtaactacctaatcacatcctttcgattcaaaatc-aaaactagccgttca 14036065  T
Q  102 caaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcgat 201  Q
    |||| ||||| |||||||||| | |||||||||||| |||||||| || ||| ||||||||| |||| | | | || |||||| ||||||| |||| |||    
T  14036066 caaaactagctgtttgctaactgcttggtcttatccgcaagacctgaatagcgcgtcgacaacttctttcatccgtcgaactagaaacaacgtctttgat 14036165  T
Q  202 tcttgctgaagtagacttgtatttttcgatggatt 236  Q
    || |||||||| | | |||||||||||||||||||    
T  14036166 tcctgctgaagcacatttgtatttttcgatggatt 14036200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 44277764 - 44277900
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattc-aaaatcgaaaaatagtcgt 99  Q
    ||||||||||| ||||  |||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||||||||||  ||| |||    
T  44277764 aattgtgacccattttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgattcaaaaatcgaaacttagccgt 44277863  T
Q  100 tccaaagctagccgtttgctaaccgtttggtcttatc 136  Q
    || ||| |||||||||||||||||| |||||||||||    
T  44277864 tcgaaaactagccgtttgctaaccgcttggtcttatc 44277900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1978316 - 1978381
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  1978316 aattgtgacccgttttccctaagaaaaactactatttatacaaatagacttataactacctaatca 1978381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 18174959 - 18175048
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaa 90  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||  |||||||||||||||||| |||| ||||||  ||||||||||    
T  18174959 aattgtgacccgtttttcctaagaaaaactactatttatacagataatcctataactacctaatcatatctattcgatcaaaaatcgaaa 18175048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11989493 - 11989536
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaa 44  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  11989493 aattgtgacccttttttcctaagaaaaactactatttatacaaa 11989536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15758598 - 15758537
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||  |||| ||||||||||||||||||||||||| |||| | ||||||||||||    
T  15758598 aattgtgacctctttttcctaagaaaaactactatttatacagatagacatataactaccta 15758537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18752690 - 18752644
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  18752690 aattgtgacccttttttcctaaaaaaaattactatttatacaaatag 18752644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 1e-52; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 16668052 - 16668287
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgtt 100  Q
    ||||||||||  |||| ||||||||||||||||||||||||| |||| ||||| |||||||||||||||| |||||||||||||||| ||| ||| ||||    
T  16668052 aattgtgaccactttttcctaagaaaaactactatttatacagatagtcctattactacctaatcacatcgtttcgattcaaaatcg-aaactagccgtt 16668150  T
Q  101 c-caaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcg 199  Q
    | |||| |||||||||||||||| | |||||||||||| |||||||| || ||| ||||||||| |||| | | | || |||||| ||||||| | ||||    
T  16668151 cacaaaactagccgtttgctaactgcttggtcttatccgcaagacctgaatagcgcgtcgacaacttctttcatccgtcgaactagaaacaacgttttcg 16668250  T
Q  200 attcttgctgaagtagacttgtatttttcgatggatt 236  Q
    |||| |||||||| | | |||||||||||||||||||    
T  16668251 attcctgctgaagcacatttgtatttttcgatggatt 16668287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 17426194 - 17426423
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattc-aaaatcgaaaaatagtcgt 99  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||||||| ||  ||| |||    
T  17426194 aattgtgacccatttttcctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgattcaaaaatcg-aatctagccgt 17426292  T
Q  100 tccaaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcg 199  Q
    || ||| |||||||||||||||||| ||||||||||||||||||||| ||| || |||| |||  |||| | | | || ||||| |||||| ||||||||    
T  17426293 tcgaaaactagccgtttgctaaccgcttggtcttatccacaagacctgaag-gcgcgtctacagcttctttcatccgtcgaact-aaaacagcttcttcg 17426390  T
Q  200 attcttgctgaagtagacttgtatttttcgatg 232  Q
    |||| |||||| ||| || ||||||| ||||||    
T  17426391 attcctgctgaggtacacatgtatttgtcgatg 17426423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 20193252 - 20193388
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattc-aaaatcgaaaaatagtcgt 99  Q
    ||||||||||| ||||  |||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||||||||||  ||| |||    
T  20193252 aattgtgacccattttttctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgattcaaaaatcgaaacttagccgt 20193351  T
Q  100 tccaaagctagccgtttgctaaccgtttggtcttatc 136  Q
    || ||| |||||||||||||||||| |||||||||||    
T  20193352 tcgaaaactagccgtttgctaaccgcttggtcttatc 20193388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 238
Target Start/End: Complemental strand, 1735315 - 1735109
Alignment:
Q  28 actactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgttccaaagctagccgtttgctaaccgttt 127  Q
    ||||||||||||||| |||| |||||||||||||||||| |||  ||||||||||||||| | | ||| ||||| ||| |||||||||||||||||| ||    
T  1735315 actactatttatacagatagtcctataactacctaatcatatc-cttcgattcaaaatcg-agactagccgttcgaaa-ctagccgtttgctaaccgctt 1735219  T
Q  128 ggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcgattcttgctgaagtagacttgtattttt 227  Q
    || |||||||| || || |  |  || ||||||||| |||  |||| ||| |||| |||| | || |||||||||| | |||||||||| ||||||||||    
T  1735218 ggccttatccaaaaaacttggaaggcgcgtcgacaacttcctttacttgtcgaacaaaaacccac-tcttcgattccttctgaagtagatttgtattttt 1735120  T
Q  228 cgatggattct 238  Q
    |||||||||||    
T  1735119 cgatggattct 1735109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22352111 - 22352176
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22352111 aattgtgacccgtttttcctaagaaaaactactatttatacaaatagtcctataactacctaatca 22352176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25389080 - 25389141
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||  |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  25389080 aattgtgaccaatttttcctaagaaaaactactatttatacaaatagacctataactaccta 25389141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 12821332 - 12821398
Alignment:
Q  13 ttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgatt 79  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||||||| |||||||  |||||||    
T  12821332 tttttcctaagaaaaactgctatttatacaaatagacctataactacctagtcacatccattcgatt 12821398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22064626 - 22064583
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaa 44  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  22064626 aattgtgacccttttttcctaagaaaaactactatttatacaaa 22064583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41438942 - 41438988
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  41438942 aattgtgacccttttttcctaagaaaaactactatttatacagatag 41438988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18735410 - 18735364
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  18735410 aattgtgacccttttttcttaagagaaactactatttatacaaatag 18735364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22698196 - 22698242
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||||||||| |||| | |||||||||||||||||||||||    
T  22698196 aattgtgacccttttttcctagggaaaactactatttatacaaatag 22698242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29708264 - 29708310
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  29708264 aattgtgacccgtttttcctaagaaaaactactatttatacagatag 29708310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15337351 - 15337305
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||| | |||||||||| | |||||||||||||||||||||||    
T  15337351 aattgtgatcttttttccctagggaaaactactatttatacaaatag 15337305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15426416 - 15426370
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||| | |||||||||| | |||||||||||||||||||||||    
T  15426416 aattgtgatcttttttccctagggaaaactactatttatacaaatag 15426370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15517720 - 15517674
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||| | |||||||||| | |||||||||||||||||||||||    
T  15517720 aattgtgatcttttttccctagggaaaactactatttatacaaatag 15517674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 2e-51; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 24967568 - 24967339
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgtt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||| ||| ||| ||||    
T  24967568 aattgtgacccttttttcctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgattcaaaatcg-aaactagccgtt 24967470  T
Q  101 c-caaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcg 199  Q
    | |||| |||||||||||||||| | |||| ||||| |  ||||||| |||||| ||||||||| |||| | | | || |||||| ||||||| | ||||    
T  24967469 cacaaaactagccgtttgctaactgcttggccttatacgtaagacctaaagagcgcgtcgacaacttctttcatccgtcgaactagaaacaacgtattcg 24967370  T
Q  200 attcttgctgaagtagacttgtatttttcga 230  Q
    |||| |||||||| | | |||||||||||||    
T  24967369 attcctgctgaagcacatttgtatttttcga 24967339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 24954360 - 24954144
Alignment:
Q  20 taagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgttc-caaagctagccgtttgc 118  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||| ||| ||| ||||| |||| ||||||||||||    
T  24954360 taagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgattcaaaatcg-aaactagccgttcacaaaactagccgtttgc 24954262  T
Q  119 taaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcgattcttgctgaagtagact 218  Q
    |||| | |||| ||||| |  ||||||| |||||| ||||||||| |||| | | | || |||||| ||||||| | |||||||| |||||||| | | |    
T  24954261 taactgcttggccttatacgtaagacctaaagagcgcgtcgacaacttctttcatccgtcgaactagaaacaacgtattcgattcctgctgaagcacatt 24954162  T
Q  219 tgtatttttcgatggatt 236  Q
    ||||||||||||||||||    
T  24954161 tgtatttttcgatggatt 24954144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 23190349 - 23190438
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaa 90  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||  |||||||||||||||||| |||| ||||||||||||||||||    
T  23190349 aattgtgacccgtttttcctaagaaaaactactatttatacagataatcctataactacctaatcatatctattcgattcaaaatcgaaa 23190438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 23203965 - 23204054
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaa 90  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||  |||||||||||||||||| |||| ||||||||||||||||||    
T  23203965 aattgtgacccgtttttcctaagaaaaactactatttatacagataatcctataactacctaatcatatctattcgattcaaaatcgaaa 23204054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 23611604 - 23611693
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaa 90  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||  |||||||||||||||||| |||| ||||||||||||||||||    
T  23611604 aattgtgacccgtttttcctaagaaaaactactatttatacagataatcctataactacctaatcatatctattcgattcaaaatcgaaa 23611693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22633863 - 22633774
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaa 90  Q
    ||||||||||  |||| || |||||||||||||||||||||| |||  |||||||||||||||||| |||| ||||||||||||||||||    
T  22633863 aattgtgacctgtttttccaaagaaaaactactatttatacagataatcctataactacctaatcatatctattcgattcaaaatcgaaa 22633774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22648612 - 22648523
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaa 90  Q
    ||||||||||  |||| ||||||||||||||||||||||||| |||  |||| ||||||||||||| |||| ||||||||||||||||||    
T  22648612 aattgtgacctgtttttcctaagaaaaactactatttatacagataatcctagaactacctaatcatatctattcgattcaaaatcgaaa 22648523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 23615209 - 23615295
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcg 87  Q
    ||||||||||  |||| |||||||||||||||||||||||||  ||  ||||||||||||||| || |||| |||||||||||||||    
T  23615209 aattgtgacctatttttcctaagaaaaactactatttatacaggtaatcctataactacctaaacatatctgttcgattcaaaatcg 23615295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24896672 - 24896611
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| | ||||||||||||    
T  24896672 aattgtgacccgtttttcctaagaaaaactactatttatacaaatagacttataactaccta 24896611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39227548 - 39227591
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaa 44  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  39227548 aattgtgacccttttttcctaagaaaaactactatttatacaaa 39227591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16664777 - 16664823
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||    
T  16664777 aattgtgaccctttttttctaagaaaaactactatttatacaaatag 16664823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22880983 - 22880937
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  22880983 aattgtgacacttttttcctaagaaaaactactatttatacaaatag 22880937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37130441 - 37130394
Alignment:
Q  1 aattgtgaccctttttccctaag-aaaaactactatttatacaaatag 47  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  37130441 aattgcgaccctttttccctagggaaaaactactatttatacaaatag 37130394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 10480498 - 10480544
Alignment:
Q  2 attgtgaccctttttccctaag-aaaaactactatttatacaaatag 47  Q
    |||||||||||||| ||||||| |||||||||||||||||| |||||    
T  10480498 attgtgacccttttcccctaaggaaaaactactatttatactaatag 10480544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31817954 - 31817908
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||    
T  31817954 aattgtgacccgtttttcataagaaaaactactatttatacagatag 31817908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22593780 - 22593735
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaata 46  Q
    ||||||||||||||| || ||  |||||||||||||||||||||||    
T  22593780 aattgtgacccttttcccttagaaaaaactactatttatacaaata 22593735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 46364 - 46597
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgtt 100  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||   |||| ||| ||||    
T  46364 aattgtgacccatttttcctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgattcaaaaatcaaaactagccgtt 46463  T
Q  101 ccaaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcga 200  Q
    | ||| |||||||||||||||||  ||||||||||||||||||||| ||| || |||| |||  |||| | | | || ||||| |||||| |||||||||    
T  46464 cgaaaactagccgtttgctaaccacttggtcttatccacaagacctgaag-gcgcgtctacagcttctttcatccgtcgaact-aaaacagcttcttcga 46561  T
Q  201 ttcttgctgaagtagacttgtatttttcgatggatt 236  Q
    ||| |||||| ||| || ||||||| ||||||||||    
T  46562 ttcctgctgaggtacacatgtatttgtcgatggatt 46597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 51002 - 51235
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgtt 100  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||   |||| ||| ||||    
T  51002 aattgtgacccatttttcctaagaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgattcaaaaatcaaaactagccgtt 51101  T
Q  101 ccaaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcga 200  Q
    | ||| |||||||||||||||||  ||||||||||||||||||||| ||| || |||| |||  |||| | | | || ||||| |||||| |||||||||    
T  51102 cgaaaactagccgtttgctaaccacttggtcttatccacaagacctgaag-gcgcgtctacagcttctttcatccgtcgaact-aaaacagcttcttcga 51199  T
Q  201 ttcttgctgaagtagacttgtatttttcgatggatt 236  Q
    ||| |||||| ||| || ||||||| ||||||||||    
T  51200 ttcctgctgaggtacacatgtatttgtcgatggatt 51235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 5667 - 5434
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattc-aaaatcgaaaaatagtcgt 99  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||| ||||||||||||||||| |||| ||||||||| ||||||| ||| ||| |||    
T  5667 aattgtgacccatttttcctaagaaaaactactatttatacagatagtcctataactacctaatcccatcctttcgattcaaaaatcg-aaactagccgt 5569  T
Q  100 tccaaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcg 199  Q
    || ||| ||||| |||||||||||| ||||||||||||||||||| | ||| || ||||||||| |||| | | | || ||||| |||||| ||||||||    
T  5568 tcgaaaactagctgtttgctaaccgcttggtcttatccacaagacatgaag-gcgcgtcgacaacttctttcatccgtcgaact-aaaacagcttcttcg 5471  T
Q  200 attcttgctgaagtagacttgtatttttcgatggatt 236  Q
    |||| | |||| ||| || ||||||| ||||||||||    
T  5470 attcctactgaggtacacatgtatttgtcgatggatt 5434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 22086438 - 22086205
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattc-aaaatcgaaaaatagtcgt 99  Q
    ||||||||||| |||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||| ||||||||| ||||||| ||| ||| |||    
T  22086438 aattgtgacccatttttcctaagaaaaactactatttatacggatagtcctataactacctaatcacatcctttcgattcaaaaatcg-aaactagccgt 22086340  T
Q  100 tccaaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcg 199  Q
    || | | |||||||||||||||||| ||||||||||||||||||||| ||| || |||| |||  |||| | | | || ||||| |||||| ||||||||    
T  22086339 tcgagaactagccgtttgctaaccgcttggtcttatccacaagacctgaag-gctcgtctacagcttctttcatccgtcgaact-aaaacagcttcttcg 22086242  T
Q  200 attcttgctgaagtagacttgtatttttcgatggatt 236  Q
    |||| | |||| ||| || ||||||| ||||||||||    
T  22086241 attcctactgaggtacacatgtatttgtcgatggatt 22086205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 41368757 - 41368991
Alignment:
Q  1 aattgtgaccctttttccctaag-aaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgt 99  Q
    |||||||||||||||| |||||| |||||||| |||||||||| |||| |||||||||||||||||| |||  ||||||||||||||| | | ||| |||    
T  41368757 aattgtgacccttttt-cctaagaaaaaactattatttatacagatagtcctataactacctaatcatatc-cttcgattcaaaatcg-agactagccgt 41368853  T
Q  100 tccaaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcg 199  Q
    || ||| ||||||||||||||||||||||| |||||||| || || |  |  || ||||||||| |||  |||||||| |||| |||| | || ||||||    
T  41368854 tcgaaa-ctagccgtttgctaaccgtttggccttatccaaaaaacttggaaggcgcgtcgacaacttcctttacctgtcgaacaaaaacctac-tcttcg 41368951  T
Q  200 attcttgctgaagtagacttgtatttttcgatggattctt 239  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  41368952 attcatgctgaagtagatttgtatttttcgatggattctt 41368991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 41383664 - 41383898
Alignment:
Q  1 aattgtgaccctttttccctaag-aaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgt 99  Q
    |||||||||||||||| |||||| |||||||| |||||||||| |||| |||||||||||||||||| |||  ||||||||||||||| | | ||| |||    
T  41383664 aattgtgacccttttt-cctaagaaaaaactattatttatacagatagtcctataactacctaatcatatc-cttcgattcaaaatcg-agactagccgt 41383760  T
Q  100 tccaaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcg 199  Q
    | |||| ||||||||||||||||||||||| |||||||| || || |  |  || ||||||||| |||  |||||||| |||| |||| | || ||||||    
T  41383761 t-caaaactagccgtttgctaaccgtttggccttatccaaaaaacttggaaggcgcgtcgacaacttcctttacctgtcgaacaaaaacctac-tcttcg 41383858  T
Q  200 attcttgctgaagtagacttgtatttttcgatggattctt 239  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  41383859 attcctgctgaagtagatttgtatttttcgatggattctt 41383898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31845755 - 31845816
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  31845755 aattgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataactaccta 31845816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22809160 - 22809221
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||| |||| |||||||||||| ||||||||||||||||| | ||||||||||||    
T  22809160 aattgtgacccgtttttcctaagaaaaaccactatttatacaaatagacttataactaccta 22809221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21310768 - 21310725
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaa 44  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  21310768 aattgtgacccttttttcctaagaaaaactactatttatacaaa 21310725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21168439 - 21168485
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  21168439 aattgtgaccctttttcgttaagaaaaactactatttatacaaatag 21168485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29305257 - 29305211
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  29305257 aattgtgacccgtttttcctaagaaaaactactatttatacaaatag 29305211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1528746 - 1528811
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||| | ||||||| ||||||||    
T  1528746 aattgtgacccgtttttcgtaagaaaaacttctatttatacaaatagacatataactgcctaatca 1528811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21076599 - 21076556
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaa 44  Q
    |||||||||| ||||| |||||||||||||||||||||||||||    
T  21076599 aattgtgaccattttttcctaagaaaaactactatttatacaaa 21076556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 27561937 - 27561854
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaa 84  Q
    ||||||||||  |||| | ||||||||||| |||||||||||||||  ||||||||| |||||||| | || ||||||| ||||    
T  27561937 aattgtgacctgtttttcttaagaaaaacttctatttatacaaataatcctataactgcctaatcataactattcgatttaaaa 27561854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23511649 - 23511609
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatac 41  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  23511649 aattgtgacccgtttttcctaagaaaaactactatttatac 23511609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4229954 - 4230000
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||||||||  |||| | |||||||||||||||||||||||    
T  4229954 aattgtgacccttttctcctagggaaaactactatttatacaaatag 4230000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 21137682 - 21137648
Alignment:
Q  13 ttttccctaagaaaaactactatttatacaaatag 47  Q
    |||| ||||||||||||||||||||||||||||||    
T  21137682 tttttcctaagaaaaactactatttatacaaatag 21137648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 50826418 - 50826372
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||| ||||||||| ||||||||||| || |||||||||||||||    
T  50826418 aattgtaacccttttttcctaagaaaaattattatttatacaaatag 50826372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 28625 - 28842
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgtt 100  Q
    |||| |||||| |||| ||||||||||||||||||||||||| |||| ||||||||||||||||| |||| |||||||||||||||||||              
T  28625 aattatgacccctttttcctaagaaaaactactatttatacagatagtcctataactacctaatcgcatcctttcgattcaaaatcgaaa---------- 28714  T
Q  101 ccaaagctagccgtttgctaaccgtttggtcttatccacaagaccttaagagcacgtcgacaatttctcttacctgtagaactaaaaacaacttcttcga 200  Q
          |||||| ||||||||||| |||||||||| |||||||||| ||| || ||||||||| |||| | | |||| ||||| |||| | |||||||||    
T  28715 ------ctagccatttgctaaccgcttggtcttattcacaagacctgaag-gcgcgtcgacaacttctttcatctgtcgaact-aaaatagcttcttcga 28806  T
Q  201 ttcttgctgaagtagacttgtatttttcgatggatt 236  Q
    ||| |||||| ||| || ||||||| ||||||||||    
T  28807 ttcctgctgaggtacacatgtatttgtcgatggatt 28842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 39894 - 39805
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaa 90  Q
    ||||||||||  |||| ||||||||||||||||||||||||| |||  |||||||||||||||||| |||| || |||||||||||||||    
T  39894 aattgtgacctgtttttcctaagaaaaactactatttatacagataatcctataactacctaatcatatctgtttgattcaaaatcgaaa 39805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29437 - 29498
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  29437 aattgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataactaccta 29498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 15419 - 15555
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaaaatagtcgtt 100  Q
    |||||||||| ||||  | ||| ||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||| ||| ||| ||||    
T  15419 aattgtgaccattttatcataaaaaaaactactatttatacagatagtcctataactacctaatcacatcctttcgattcaaaatcg-aaactagccgtt 15517  T
Q  101 c-caaagctagccgtttgctaaccgtttggtcttatcc 137  Q
    | |||| |||||||||||||||| | |||| |||||||    
T  15518 cacaaaactagccgtttgctaactgcttggccttatcc 15555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 23062 - 22973
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaa 90  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||    
T  23062 aattgtgacccgtttttcctaagaaaaactactatttatacaaataatcctataactacctaatcatatctattcgattcaaaatcgaaa 22973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 44238 - 44149
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaa 90  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||  |||||||||||||||||| |||| ||| ||||||||||||||    
T  44238 aattgtgacccgtttttcctaagaaaaactactatttatacagataatcctataactacctaatcatatctattcaattcaaaatcgaaa 44149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 43215 - 43304
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaa 90  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||  |||||||||||||||||| |||| ||||||||||||||||||    
T  43215 aattgtgacccgtttttcctaagaaaaactactatttatacagataatcctataactacctaatcatatctattcgattcaaaatcgaaa 43304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 23431949 - 23431860
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaa 90  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||||||||||| |||| || |||||||||||||||    
T  23431949 aattgtgacccgtttttcctaagaaaaactactatttatacaaataatcctataactacctaatcatatctattagattcaaaatcgaaa 23431860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23490989 - 23490908
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaa 82  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||||||||||| |||| ||||||||||    
T  23490989 aattgtgacccgtttttcctaagaaaaactactatttatacaaataatcctataactacctaatcatatctattcgattcaa 23490908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23496587 - 23496506
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaa 82  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||||||||||| |||| ||||||||||    
T  23496587 aattgtgacccgtttttcctaagaaaaactactatttatacaaataatcctataactacctaatcatatctattcgattcaa 23496506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 16209829 - 16209767
Alignment:
Q  4 tgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    |||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16209829 tgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataactacctaatca 16209767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 30755623 - 30755701
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgatt 79  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| | |||||||||||||||| | || |||||||    
T  30755623 aattgtgacccgtttttcctaagaaaaactactatttatacaaatagacttataactacctaatcataactattcgatt 30755701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19405880 - 19405926
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  19405880 aattgtgacccttttttcctaagaaaaactactatttatacaaatag 19405926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1557777 - 1557838
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||  |||| ||||||||||||||||||||||||| |||| | ||||||||||||    
T  1557777 aattgtgacctctttttcctaagaaaaactactatttatacagatagacatataactaccta 1557838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18258202 - 18258248
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||||    
T  18258202 aattgtgaccctttttttctaaggaaaactactatttatacaaatag 18258248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19025484 - 19025562
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgatt 79  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||   |||||||| |||||||| | || |||||||    
T  19025484 aattgtgacccgtttttcttaagaaaaacttctatttatacaaataattctataactgcctaatcataactattcgatt 19025562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19038527 - 19038605
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgatt 79  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||   |||||||| |||||||| | || |||||||    
T  19038527 aattgtgacccgtttttcttaagaaaaacttctatttatacaaataattctataactgcctaatcataactattcgatt 19038605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11794140 - 11794094
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||||||||| |||| | |||||||||||||||||| ||||    
T  11794140 aattgtgacccttttttcctatggaaaactactatttatacatatag 11794094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 58536 - 58447
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaa 90  Q
    ||||||||||  |||| |||||||||||||||||||||||||||||  |||||||||||||||||| |||| ||||||| ||||||||||    
T  58536 aattgtgacctgtttttcctaagaaaaactactatttatacaaataatcctataactacctaatcatatctgttcgatttaaaatcgaaa 58447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 8175 - 8253
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgatt 79  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||    
T  8175 aattgtgacccgttttttctaagaaaaactactatttatacaaatagtcctataactacctaatcatatctgttcgatt 8253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 15305 - 15383
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgatt 79  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||    
T  15305 aattgtgacccgttttttctaagaaaaactactatttatacaaatagtcctataactacctaatcatatctgttcgatt 15383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25116 - 25051
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25116 aattgtgacccatttttcctaagaaaaactactatttatacaaatagacctataactacctaatca 25051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 41370 - 41281
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaaatcgaaa 90  Q
    ||||||||||  |||| |||||||||||||||||||||||||||||| |||||||||||||||||  | || ||||||| ||||||||||    
T  41370 aattgtgacctgtttttcctaagaaaaactactatttatacaaatagtcctataactacctaatcgtacctgttcgatttaaaatcgaaa 41281  T

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Target: scaffold0304 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5876 - 5954
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgatt 79  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  || |||| |||| |||||||    
T  5876 aattgtgacccttttttcctaagaaaaactactatttatacaaatagtcctataactgtctgatcatatctgttcgatt 5954  T

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Target: scaffold0423 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1767 - 1706
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  1767 aattgtgacccatttttcctaagaaaaactactatttatacaaataggcctataactaccta 1706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 118463 - 118524
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  118463 aattgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataactaccta 118524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 142313 - 142374
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  142313 aattgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataactaccta 142374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 50; Significance: 1e-19; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 62180 - 62115
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  62180 aattgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataactacccaatca 62115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 85041 - 84976
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  85041 aattgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataactacccaatca 84976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 71358 - 71302
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataact 57  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||    
T  71358 aattgtgacccgtttttcctaagaaaaactactatttatacaaatagacctataact 71302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6753 - 6799
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||| || |||| ||||||||||||||||||||||||||||||    
T  6753 aattgtgatccctttttcctaagaaaaactactatttatacaaatag 6799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22654 - 22608
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||| |||||| |||| ||||||||||||||||||||| ||||||||    
T  22654 aattatgacccgtttttcctaagaaaaactactatttacacaaatag 22608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 151497 - 151558
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  151497 aattgtgacccctttttcctaagaaaaactactatttatacaaataggcctataactaccta 151558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 162056 - 162117
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  162056 aattgtgacccctttttcctaagaaaaactactatttatacaaataggcctataactaccta 162117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20506413 - 20506478
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||  |||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20506413 aattgtgacctgtttttcctaagaaaaactactatttatacaaatagacctataactacctaatca 20506478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21504676 - 21504611
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  21504676 aattgtgacccgtttttcctaagaaaaacttctatttatacaaatagacctataactgcctaatca 21504611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21530343 - 21530278
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  21530343 aattgtgacccgtttttcctaagaaaaacttctatttatacaaatagacctataactgcctaatca 21530278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21982707 - 21982772
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||  |||| ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  21982707 aattgtgacctatttttcctaagaaaaactactatttatataaatagtcctataactacctaatca 21982772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26274191 - 26274256
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  26274191 aattgtgacccgtttttcctaagaaaaacttctatttatacaaatagacctataactgcctaatca 26274256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40932918 - 40932874
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaat 45  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  40932918 aattgtgaccctttttccctagggaaaactactatttatacaaat 40932874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20024547 - 20024593
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||||||||||| ||||| ||||||||||||||||| ||||    
T  20024547 aattgtgaccctttttccttaagagaaactactatttatacagatag 20024593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 18156182 - 18156137
Alignment:
Q  2 attgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||| ||||||| || ||||| |||||||||||||||||||    
T  18156182 attgtgaccttttttccttaggaaaagctactatttatacaaatag 18156137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 4551 - 4469
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgattcaaa 83  Q
    ||||||||||  |||| ||||||||||||||||||||||||| |||| |||||||||||||||||  |||  |||||||||||    
T  4551 aattgtgacctctttttcctaagaaaaactactatttatacagatagtcctataactacctaatcgtatccgttcgattcaaa 4469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 2e-17; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25185 - 25250
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  25185 aattgtgacccgtttttcctaagaaaaacttctatttatacaaatagacctataactgcctaatca 25250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28683 - 28748
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  28683 aattgtgacccgtttttcctaagaaaaacttctatttatacaaatagacctataactgcctaatca 28748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 115442 - 115507
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  115442 aattgtgacccgtttttcctaagaaaaacttctatttatacaaatagacctataactgcctaatca 115507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 390117 - 390056
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||| |||| |||||||||||||| |||||||| |||||| ||||||||||||||    
T  390117 aattgtgacccgtttttcctaagaaaaactaatatttatagaaatagacctataactaccta 390056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 130005 - 130071
Alignment:
Q  13 ttttccctaagaaaaactactatttatacaaatagccctataactacctaatcacatcttttcgatt 79  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||| |||||||| | || |||||||    
T  130005 tttttcctaagaaaaacttctatttatacaaatagacctataactgcctaatcatagctattcgatt 130071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 15748 - 15689
Alignment:
Q  3 ttgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||| ||||||||||||||    
T  15748 ttgtgacccgtttttcctaagaaaaactactatttatagaaatagacctataactaccta 15689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 45330 - 45376
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  45330 aattgtgacccttttttcctaagaaaaactactatttatacaaatag 45376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8855 - 8916
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||  |||| |||||||||||||||||||||||||||||| | ||||||||||||    
T  8855 aattgtgacctgtttttcctaagaaaaactactatttatacaaatagacttataactaccta 8916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26873 - 26938
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| ||||||||||||  |||||||||||||||| ||||||||| ||||||||    
T  26873 aattgtgacccgtttttcctaagaaaaacccctatttatacaaatagacctataactgcctaatca 26938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2467 - 2402
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||  ||||||||||||||||||    
T  2467 aattgtgacccgtttttcttaagaaaaacttctatttatacaaataatcctataactacctaatca 2402  T

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Target: scaffold0021 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18595 - 18660
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| ||||||||||||| |||||| ||||||||| ||||||||| ||||||||    
T  18595 aattgtgacccgtttttcctaagaaaaacttctatttctacaaatagacctataactgcctaatca 18660  T

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Target: scaffold0021; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28126 - 28191
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaatca 66  Q
    ||||||||||| |||| ||||||||||||| |||||| ||||||||| ||||||||| ||||||||    
T  28126 aattgtgacccgtttttcctaagaaaaacttctatttctacaaatagacctataactgcctaatca 28191  T

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Target: scaffold0013 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 129197 - 129152
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaata 46  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  129197 aattgtgacccttttttcctaagaaaaactactatttatacaaata 129152  T

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Target: scaffold0216 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20067 - 20110
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaa 44  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  20067 aattgtgacccttttttcctaagaaaaactactatttatacaaa 20110  T

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Target: scaffold0060 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32111 - 32065
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  32111 aattgtgacccgtttttcctaagaaaaactactatttatacaaatag 32065  T

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Target: scaffold0059 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 68204 - 68250
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  68204 aattgtgactcttttttcctaagaaaaactactatttatacaaatag 68250  T

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Target: scaffold0059; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 76309 - 76355
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  76309 aattgtgactcttttttcctaagaaaaactactatttatacaaatag 76355  T

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Target: scaffold0046 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30625 - 30579
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  30625 aattgtgacccgtttttcctaagaaaaactactatttatacaaatag 30579  T

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Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 200157 - 200111
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||    
T  200157 aattgtgacccttttttcctaagaaaaacaactatttatacaaatag 200111  T

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Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29158 - 29097
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactaccta 62  Q
    ||||||||||  |||| ||||||||||||||||||||||||| |||| | ||||||||||||    
T  29158 aattgtgacctctttttcctaagaaaaactactatttatacagatagacatataactaccta 29097  T

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Target: scaffold0168 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 1503 - 1547
Alignment:
Q  3 ttgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||||||||| || |||||||||||||||||||||||||    
T  1503 ttgtgaccctttttccttaggaaaaactactatttatacaaatag 1547  T

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Target: scaffold0081 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 44357 - 44420
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatagccctataactacctaat 64  Q
    ||||||||||  |||| ||||||||||||| |||||||||||||||  ||||||||| ||||||    
T  44357 aattgtgacctgtttttcctaagaaaaactcctatttatacaaatacacctataactgcctaat 44420  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33434 - 33477
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaa 44  Q
    ||||||||||| |||| |||||||||||||||||||||||||||    
T  33434 aattgtgacccgtttttcctaagaaaaactactatttatacaaa 33477  T

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Target: scaffold0509 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1316 - 1362
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||||  |||| ||||||||||||||||||||||||||||||    
T  1316 aattgtgacctgtttttcctaagaaaaactactatttatacaaatag 1362  T

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Target: scaffold0509; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7744 - 7790
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||||  |||| ||||||||||||||||||||||||||||||    
T  7744 aattgtgacctgtttttcctaagaaaaactactatttatacaaatag 7790  T

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Target: scaffold0239 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17090 - 17136
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||    
T  17090 aattgtgaccctttttttctaagaaaaactactctttatacaaatag 17136  T

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Target: scaffold0100 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9020 - 8974
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||||||    
T  9020 aattgtgactctttttccttaagagaaactactatttatacaaatag 8974  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 102100 - 102146
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||||||||||| ||||| |||||| |||||||||||||||    
T  102100 aattgtgaccctttttccttaagagaaactattatttatacaaatag 102146  T

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Target: scaffold0770 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3796 - 3842
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||||||||||| | ||||| |||||| |||||||||||||||    
T  3796 aattgtgaccctttttacttaagagaaactaatatttatacaaatag 3842  T

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Target: scaffold0480 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3731 - 3685
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    ||||||||||| ||||||||| | |||||||||| ||||||||||||    
T  3731 aattgtgacccattttccctagggaaaactactacttatacaaatag 3685  T

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Target: scaffold0151 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14240 - 14282
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaa 43  Q
    |||||||||||||||||| || | |||||||||||||||||||    
T  14240 aattgtgaccctttttccttagggaaaactactatttatacaa 14282  T

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Target: scaffold0063 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 70674 - 70628
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatacaaatag 47  Q
    |||||||| || ||||||||| | |||||||||||||||||||||||    
T  70674 aattgtgatccgttttccctatggaaaactactatttatacaaatag 70628  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 63809 - 63772
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactattta 38  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  63809 aattgtgacccgtttttcctaagaaaaactactattta 63772  T

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Target: scaffold0504 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 719 - 759
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatac 41  Q
    ||||||||||  ||||||||| |||||||||||||||||||    
T  719 aattgtgacctgttttccctatgaaaaactactatttatac 759  T

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Target: scaffold0035 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25848 - 25888
Alignment:
Q  1 aattgtgaccctttttccctaagaaaaactactatttatac 41  Q
    ||||||||||| |||| |||| |||||||||||||||||||    
T  25848 aattgtgacccgtttttcctatgaaaaactactatttatac 25888  T

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