View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10521_low_6 (Length: 405)
Name: NF10521_low_6
Description: NF10521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10521_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 8 - 389
Target Start/End: Complemental strand, 37135621 - 37135240
Alignment:
| Q |
8 |
aagcagagataccggagacagcatacgacaaaacaacggcaggaccagcctcctcacgagcttcaagaccggtgagaacaaaaatgccggaaccgacaac |
107 |
Q |
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| T |
37135621 |
aagcagagataccggagacagcatacgacaaaacaacggcaggaccagcctcctcacgagcttcaagaccggtgagaacaaaaatgccggaaccgacaac |
37135522 |
T |
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| Q |
108 |
tgcaccgattccgaaccaaataagatcccaaccattcagagttttcttcatttggtggctgcttctagctttcatctccacaatttccatgtaatctttt |
207 |
Q |
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| T |
37135521 |
tgcgccgattccgaaccaaataagatcccaaccattcagagttttcttcatttggtggctgcttctagctttcatctccacaatttccatgtaatctttt |
37135422 |
T |
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| Q |
208 |
gatcgtgtaaacattctatctttcaacctgtatggtgttttcatgaatgcttttccataatcacctaaacttttgaatgaatcttctgggaaaaactcat |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37135421 |
gatcgtgtaaacattctatctttcaacctgtatggtgttttcatgaatgcttttccataatcacctaaacttttgaatgaatcttctgggaaaaactcat |
37135322 |
T |
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| Q |
308 |
ttcttgctccactgttttctgttcccatgtcctgattcatataatttaatttgatcaatgcaacaacatgcaatgctgttgt |
389 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37135321 |
ttcttgctccactgttttctgttcccatgtcctgattcatataatttaatttgatcaatgcaacaacatgcaatgctgttgt |
37135240 |
T |
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