View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10522_2 (Length: 422)
Name: NF10522_2
Description: NF10522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10522_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 422
Target Start/End: Complemental strand, 25608328 - 25607897
Alignment:
| Q |
1 |
tatttatttagtttgaaattannnnnnnnggaaaataataatcatcgtcgaaaaaggatattacatagcatacggattcaccccctcacctagttgttta |
100 |
Q |
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| T |
25608328 |
tatttatttagtttgaaattattttttttggaaaataataatcatcgtcgaaaaaggatattacatagcatacggattcaccccctcacctagttgttta |
25608229 |
T |
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| Q |
101 |
ttacgagcaacagttataaactctattcatgcaaaccaacataaaaaa--------tagacattaaaagttcacgagaaaccagctgtgaaatatatact |
192 |
Q |
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| T |
25608228 |
ttacgagcaccagttataaactctattcatgcaaaccaacataaaaaaataaaaaatagactttaaaagttcacgagaaaccagctgtgaaatatatact |
25608129 |
T |
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| Q |
193 |
agaaaatatgtgagttatttaacttccttctagtatgaactattaatgtgagaatgatgtgaaaaagaaga-aaaacacgtgagaatgatgaaaaagttg |
291 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
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| T |
25608128 |
agaaaatatgtgacttatttaacttccttctagtatgaactattaatgtgagaatgatgtgaaaaagaagaaaaaaaacgtgagaatgatgaaaaagttg |
25608029 |
T |
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| Q |
292 |
attttggacaagtttcttttatattttcaaaataaaaaatacactagtatattctcgac-nnnnnnnngagagagatagtcgttgaatttcttgtcactt |
390 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |
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| T |
25608028 |
attttggacaagtttcttttatgttttcaaaataaaaaatacactagtatattttcgacaaaaaaaaagatagagatagtcgttgaatttcttgtcactt |
25607929 |
T |
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| Q |
391 |
tagcattactagctctctttcacccactacca |
422 |
Q |
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| T |
25607928 |
tagtattactagctctctttcacccactacca |
25607897 |
T |
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