View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10524_8 (Length: 489)

Name: NF10524_8
Description: NF10524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10524_8
NF10524_8
[»] chr7 (21 HSPs)
chr7 (12-489)||(18141650-18142123)
chr7 (12-489)||(18115082-18115555)
chr7 (15-485)||(14323567-14324037)
chr7 (15-485)||(14345760-14346230)
chr7 (15-485)||(14035730-14036200)
chr7 (115-488)||(44277526-44277900)
chr7 (161-390)||(18174819-18175048)
chr7 (242-390)||(18160049-18160197)
chr7 (185-390)||(1978176-1978381)
chr7 (189-367)||(15758537-15758715)
chr7 (207-367)||(11989376-11989536)
chr7 (204-345)||(18752644-18752782)
chr7 (204-337)||(40342863-40342995)
chr7 (204-316)||(24876397-24876509)
chr7 (204-337)||(10827806-10827940)
chr7 (204-337)||(11021598-11021732)
chr7 (210-337)||(41239234-41239358)
chr7 (210-276)||(10478260-10478326)
chr7 (287-337)||(10864187-10864237)
chr7 (235-276)||(16713342-16713383)
chr7 (235-276)||(17687578-17687619)
[»] chr4 (16 HSPs)
chr4 (15-485)||(18108499-18108964)
chr4 (172-416)||(13277151-13277394)
chr4 (172-367)||(14556908-14557103)
chr4 (172-367)||(15153596-15153791)
chr4 (172-390)||(13292554-13292772)
chr4 (213-390)||(14714101-14714278)
chr4 (213-390)||(14775781-14775958)
chr4 (207-345)||(14022430-14022567)
chr4 (207-345)||(1658581-1658718)
chr4 (204-345)||(3077947-3078086)
chr4 (205-337)||(10267216-10267346)
chr4 (204-337)||(18567017-18567147)
chr4 (204-337)||(31079772-31079906)
chr4 (211-337)||(49526474-49526601)
chr4 (210-337)||(50687535-50687661)
chr4 (210-276)||(27812399-27812465)
[»] chr3 (23 HSPs)
chr3 (15-485)||(14683008-14683473)
chr3 (12-485)||(7396072-7396541)
chr3 (12-485)||(7341326-7341795)
chr3 (122-488)||(10778896-10779259)
chr3 (122-488)||(10792414-10792777)
chr3 (113-488)||(13299318-13299694)
chr3 (113-488)||(13309976-13310352)
chr3 (113-430)||(11887164-11887477)
chr3 (161-390)||(10139710-10139940)
chr3 (161-390)||(10171077-10171307)
chr3 (207-350)||(12491913-12492056)
chr3 (204-345)||(12844571-12844711)
chr3 (207-367)||(12021453-12021613)
chr3 (207-345)||(13023870-13024007)
chr3 (204-337)||(43135592-43135725)
chr3 (204-337)||(132461-132594)
chr3 (207-270)||(22444932-22444997)
chr3 (449-488)||(11887536-11887575)
chr3 (210-276)||(1934709-1934775)
chr3 (303-350)||(22445013-22445060)
chr3 (451-480)||(10139990-10140019)
chr3 (451-480)||(10171357-10171386)
chr3 (235-272)||(55002437-55002474)
[»] chr8 (20 HSPs)
chr8 (15-485)||(16667817-16668287)
chr8 (19-488)||(17425956-17426423)
chr8 (115-488)||(20193014-20193388)
chr8 (185-390)||(22351971-22352176)
chr8 (189-367)||(25388963-25389141)
chr8 (172-390)||(12821180-12821398)
chr8 (207-367)||(22064583-22064743)
chr8 (204-345)||(29708170-29708310)
chr8 (204-340)||(41438853-41438988)
chr8 (204-337)||(22698110-22698242)
chr8 (204-337)||(18735364-18735495)
chr8 (204-337)||(15337305-15337437)
chr8 (204-337)||(15426370-15426502)
chr8 (204-337)||(15517674-15517806)
chr8 (13-223)||(1735109-1735315)
chr8 (210-337)||(15911712-15911838)
chr8 (204-337)||(27818181-27818315)
chr8 (210-276)||(16777947-16778013)
chr8 (210-276)||(22698800-22698866)
chr8 (210-270)||(24974372-24974432)
[»] chr1 (23 HSPs)
chr1 (12-488)||(41368520-41368991)
chr1 (12-488)||(41383424-41383898)
chr1 (15-488)||(22086205-22086676)
chr1 (189-390)||(22809020-22809221)
chr1 (189-390)||(31845615-31845816)
chr1 (185-367)||(1528629-1528811)
chr1 (167-367)||(27561854-27562054)
chr1 (204-390)||(29305211-29305397)
chr1 (207-367)||(21310725-21310885)
chr1 (207-345)||(22684640-22684778)
chr1 (210-350)||(23511609-23511748)
chr1 (204-367)||(21137648-21137810)
chr1 (207-345)||(21076556-21076693)
chr1 (204-333)||(21168358-21168485)
chr1 (204-345)||(4229860-4230000)
chr1 (284-390)||(22794420-22794526)
chr1 (204-337)||(4361651-4361784)
chr1 (204-345)||(50826372-50826511)
chr1 (204-337)||(27902012-27902144)
chr1 (210-337)||(21550522-21550647)
chr1 (217-337)||(2603493-2603613)
chr1 (204-337)||(21382054-21382187)
chr1 (210-337)||(27131705-27131831)
[»] scaffold0101 (2 HSPs)
scaffold0101 (15-488)||(46126-46597)
scaffold0101 (15-385)||(50867-51235)
[»] scaffold0740 (1 HSPs)
scaffold0740 (15-488)||(5434-5905)
[»] scaffold0130 (3 HSPs)
scaffold0130 (15-485)||(28390-28842)
scaffold0130 (161-480)||(39805-40123)
scaffold0130 (189-390)||(29297-29498)
[»] scaffold0253 (1 HSPs)
scaffold0253 (114-485)||(15189-15555)
[»] chr6 (15 HSPs)
chr6 (250-485)||(16309962-16310197)
chr6 (161-480)||(23431860-23432177)
chr6 (169-398)||(23490908-23491137)
chr6 (169-398)||(23496506-23496735)
chr6 (185-390)||(16209767-16209972)
chr6 (172-367)||(19025367-19025562)
chr6 (172-367)||(30755506-30755701)
chr6 (172-367)||(19038410-19038605)
chr6 (204-367)||(19405763-19405926)
chr6 (189-367)||(1557660-1557838)
chr6 (204-345)||(11794094-11794234)
chr6 (204-333)||(18258120-18258248)
chr6 (204-337)||(16597257-16597389)
chr6 (204-337)||(26460597-26460729)
chr6 (204-337)||(19272323-19272454)
[»] scaffold0323 (1 HSPs)
scaffold0323 (168-402)||(4469-4703)
[»] scaffold0022 (1 HSPs)
scaffold0022 (161-398)||(58447-58684)
[»] chr2 (35 HSPs)
chr2 (161-390)||(22648523-22648752)
chr2 (161-390)||(23203825-23204054)
chr2 (161-480)||(23190121-23190438)
chr2 (161-480)||(23611376-23611693)
chr2 (164-390)||(23615069-23615295)
chr2 (21-291)||(24967339-24967609)
chr2 (189-390)||(24896611-24896812)
chr2 (161-326)||(22633774-22633939)
chr2 (207-367)||(39227431-39227591)
chr2 (316-485)||(24963768-24963937)
chr2 (15-231)||(24954144-24954360)
chr2 (204-338)||(16664690-16664823)
chr2 (204-337)||(22880937-22881069)
chr2 (204-350)||(31817908-31818053)
chr2 (204-337)||(37130394-37130527)
chr2 (205-337)||(22593735-22593866)
chr2 (204-337)||(34827636-34827768)
chr2 (204-337)||(28567731-28567862)
chr2 (204-337)||(23815003-23815137)
chr2 (204-337)||(10480411-10480544)
chr2 (204-310)||(21256506-21256611)
chr2 (210-337)||(20524136-20524262)
chr2 (204-337)||(23803373-23803509)
chr2 (321-367)||(22635243-22635289)
chr2 (204-337)||(25349286-25349421)
chr2 (204-276)||(23870591-23870663)
chr2 (210-337)||(21904983-21905109)
chr2 (204-334)||(22708162-22708291)
chr2 (210-276)||(30051973-30052039)
chr2 (210-276)||(30143017-30143083)
chr2 (210-276)||(30089988-30090054)
chr2 (210-276)||(30126593-30126659)
chr2 (210-276)||(23995731-23995797)
chr2 (282-337)||(23829851-23829906)
chr2 (210-276)||(20442213-20442279)
[»] scaffold0108 (2 HSPs)
scaffold0108 (161-365)||(22973-23177)
scaffold0108 (161-365)||(44149-44353)
[»] scaffold0040 (1 HSPs)
scaffold0040 (161-390)||(41281-41510)
[»] scaffold0270 (2 HSPs)
scaffold0270 (172-377)||(8048-8253)
scaffold0270 (172-377)||(15178-15383)
[»] scaffold0026 (2 HSPs)
scaffold0026 (189-383)||(142180-142374)
scaffold0026 (189-390)||(118323-118524)
[»] chr5 (12 HSPs)
chr5 (185-390)||(20506273-20506478)
chr5 (185-390)||(21982567-21982772)
chr5 (185-367)||(21530278-21530460)
chr5 (185-367)||(26274074-26274256)
chr5 (185-332)||(21504611-21504758)
chr5 (204-337)||(20024462-20024593)
chr5 (206-337)||(40932874-40933004)
chr5 (204-337)||(18156137-18156269)
chr5 (293-367)||(21507876-21507950)
chr5 (215-337)||(10624309-10624430)
chr5 (243-337)||(16832141-16832234)
chr5 (212-276)||(19212377-19212441)
[»] scaffold0064 (1 HSPs)
scaffold0064 (161-365)||(43100-43304)
[»] scaffold0001 (5 HSPs)
scaffold0001 (185-367)||(25068-25250)
scaffold0001 (185-367)||(28566-28748)
scaffold0001 (185-367)||(115325-115507)
scaffold0001 (172-367)||(129877-130071)
scaffold0001 (189-390)||(390056-390257)
[»] scaffold0282 (1 HSPs)
scaffold0282 (189-390)||(8715-8916)
[»] scaffold0023 (6 HSPs)
scaffold0023 (185-390)||(62115-62320)
scaffold0023 (185-390)||(84976-85181)
scaffold0023 (194-390)||(71302-71498)
scaffold0023 (204-390)||(6613-6799)
scaffold0023 (204-390)||(22608-22794)
scaffold0023 (285-367)||(116476-116558)
[»] scaffold0304 (1 HSPs)
scaffold0304 (172-390)||(5735-5954)
[»] scaffold0241 (1 HSPs)
scaffold0241 (185-367)||(25051-25233)
[»] scaffold0021 (2 HSPs)
scaffold0021 (185-367)||(18478-18660)
scaffold0021 (185-367)||(28009-28191)
[»] scaffold0019 (3 HSPs)
scaffold0019 (189-390)||(151357-151558)
scaffold0019 (263-390)||(161702-161829)
scaffold0019 (189-271)||(162035-162117)
[»] scaffold0080 (1 HSPs)
scaffold0080 (185-367)||(2402-2584)
[»] scaffold0081 (1 HSPs)
scaffold0081 (187-367)||(44240-44420)
[»] scaffold0193 (1 HSPs)
scaffold0193 (185-367)||(26756-26938)
[»] scaffold0358 (1 HSPs)
scaffold0358 (189-390)||(15689-15890)
[»] scaffold0005 (1 HSPs)
scaffold0005 (213-390)||(63772-63949)
[»] scaffold0516 (1 HSPs)
scaffold0516 (297-488)||(11131-11322)
[»] scaffold0046 (1 HSPs)
scaffold0046 (204-350)||(30579-30725)
[»] scaffold0509 (2 HSPs)
scaffold0509 (204-390)||(1176-1362)
scaffold0509 (204-390)||(7604-7790)
[»] scaffold0060 (1 HSPs)
scaffold0060 (204-350)||(32065-32211)
[»] scaffold0053 (1 HSPs)
scaffold0053 (204-345)||(45235-45376)
[»] scaffold0423 (1 HSPs)
scaffold0423 (189-318)||(1706-1835)
[»] scaffold0362 (1 HSPs)
scaffold0362 (207-345)||(11291-11429)
[»] scaffold0216 (1 HSPs)
scaffold0216 (207-345)||(19972-20110)
[»] scaffold0239 (2 HSPs)
scaffold0239 (204-345)||(16995-17136)
scaffold0239 (211-276)||(5542-5607)
[»] scaffold0003 (1 HSPs)
scaffold0003 (207-350)||(33335-33477)
[»] scaffold0059 (2 HSPs)
scaffold0059 (204-350)||(68105-68250)
scaffold0059 (204-334)||(76226-76355)
[»] scaffold0013 (2 HSPs)
scaffold0013 (205-350)||(129152-129296)
scaffold0013 (204-345)||(107406-107547)
[»] scaffold0016 (1 HSPs)
scaffold0016 (204-340)||(200111-200245)
[»] scaffold0168 (1 HSPs)
scaffold0168 (204-337)||(1415-1547)
[»] scaffold0107 (2 HSPs)
scaffold0107 (189-300)||(29097-29207)
scaffold0107 (297-367)||(32201-32271)
[»] scaffold0029 (1 HSPs)
scaffold0029 (204-337)||(102015-102146)
[»] scaffold0770 (1 HSPs)
scaffold0770 (204-337)||(3711-3842)
[»] scaffold0151 (1 HSPs)
scaffold0151 (208-337)||(14155-14282)
[»] scaffold0100 (1 HSPs)
scaffold0100 (204-337)||(8974-9105)
[»] scaffold0063 (1 HSPs)
scaffold0063 (204-350)||(70628-70773)
[»] scaffold0012 (1 HSPs)
scaffold0012 (206-337)||(250092-250222)
[»] scaffold0480 (1 HSPs)
scaffold0480 (204-331)||(3685-3811)
[»] scaffold0077 (1 HSPs)
scaffold0077 (204-337)||(12314-12446)
[»] scaffold0190 (1 HSPs)
scaffold0190 (204-345)||(7411-7552)
[»] scaffold0297 (1 HSPs)
scaffold0297 (210-337)||(8791-8917)
[»] scaffold0504 (1 HSPs)
scaffold0504 (210-276)||(693-759)
[»] scaffold0014 (1 HSPs)
scaffold0014 (204-324)||(7419-7536)
[»] scaffold0035 (1 HSPs)
scaffold0035 (210-273)||(25825-25888)
[»] scaffold1496 (1 HSPs)
scaffold1496 (210-276)||(1396-1462)
[»] scaffold0096 (1 HSPs)
scaffold0096 (205-345)||(36315-36454)
[»] scaffold0417 (1 HSPs)
scaffold0417 (204-337)||(1289-1421)
[»] scaffold0126 (1 HSPs)
scaffold0126 (207-276)||(31293-31362)
[»] scaffold0319 (1 HSPs)
scaffold0319 (343-377)||(11669-11703)


Alignment Details
Target: chr7 (Bit Score: 333; Significance: 0; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 12 - 489
Target Start/End: Complemental strand, 18142123 - 18141650
Alignment:
Q  12 aagaatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtctt 111  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||||||  | | ||| |||| |  ||||||  |||   |||||||    
T  18142123 aagaatccatcgaaaaatgcaagtttacttcagcaggaatcgaagaaggtgtttttagttcgtcggataaaagaagtcatcgacgcactc---aggtctt 18142027  T
Q  112 gtggataagaccaaacggttagcaaacggctagctttg-gaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttg 210  Q
    |||||||||||||| ||||| |||||||||||| |||  ||||| ||| ||| |||||||||||||||| ||| ||||||||||||||||||||||| ||    
T  18142026 gtggataagaccaagcggtttgcaaacggctagttttatgaacggctagttt-cgattttgaatcgaaaggatatgattaggtagttatagggctatctg 18141928  T
Q  211 tataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaa 310  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18141927 tataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaa-cttacactcaatactgtccgtatggaagcgacaaacgagttacaa 18141829  T
Q  311 gttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagt 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||    
T  18141828 gttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatttaagtcttgttttactaagt 18141729  T
Q  411 ctttttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattctttt 489  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18141728 ctttttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattctttt 18141650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 12 - 489
Target Start/End: Complemental strand, 18115555 - 18115082
Alignment:
Q  12 aagaatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtctt 111  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||||||  | | ||| |||| |  |||||| ||||   || ||||    
T  18115555 aagaatccatcgaaaaatgcaagtttacttcagcaggaatcgaagaaggtgtttttagttcgtcggataaaagaagtcatcgacgcgctc---agatctt 18115459  T
Q  112 gtggataagaccaaacggttagcaaacggctagctttg-gaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttg 210  Q
    |||||||||||||| ||||||||||||| |||| |||  ||| ||||| ||| |||||||||||||||| ||| ||||||||||||||||||||||| ||    
T  18115458 gtggataagaccaagcggttagcaaacgactagttttatgaaggactagttt-cgattttgaatcgaaaggatatgattaggtagttatagggctatctg 18115360  T
Q  211 tataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaa 310  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  18115359 tataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaa-cttacactcaatactgtccgtatggaagtgacaaacgagttacaa 18115261  T
Q  311 gttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagt 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||    
T  18115260 gttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatttaagtcttgttttactaagt 18115161  T
Q  411 ctttttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattctttt 489  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18115160 ctttttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattctttt 18115082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 15 - 485
Target Start/End: Complemental strand, 14324037 - 14323567
Alignment:
Q  15 aatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttgtg 114  Q
    ||||||| ||||||||||| | | |||||||| |||||||||| ||||||| |||||| || | | | |||| ||||||||| |||||| |||||||| |    
T  14324037 aatccattgaaaaatacaaatgtgcttcagcaggaatcgaagacgttgtttctagttcgacggatgaaagaagttgtcgacgcgctcttcaggtcttgcg 14323938  T
Q  115 gataagaccaaacggttagcaaacggctagctttg-gaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtat 213  Q
    ||||||||||| | |||||||||||||||| |||| ||||| ||| ||| |||||||||||||||| |||||||||||||||||| ||| |||| |||||    
T  14323937 gataagaccaagcagttagcaaacggctagttttgtgaacggctagttt-cgattttgaatcgaaaggatgtgattaggtagttacaggactatctgtat 14323839  T
Q  214 aaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 313  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14323838 aaatagtagtttttcttaggaaaaaagggtcacaactcaatcatactaaacacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 14323739  T
Q  314 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || |||||||    
T  14323738 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatttaagtcttgttttaccaagtctt 14323639  T
Q  414 tttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattc 485  Q
    || ||||||||||||||||||| | | |||||||  | |||||||||||||||||||||||| |||||||||    
T  14323638 ttcaaagtacttcttttcattattgttatttacagaacttcgattgaattcaacacggattgaattcgattc 14323567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 15 - 485
Target Start/End: Complemental strand, 14346230 - 14345760
Alignment:
Q  15 aatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttgtg 114  Q
    ||||||||||||||||||| | | |||||||| |||||||||| ||||||| |||||| || | | | |||| ||||||||| |||||| |||||||| |    
T  14346230 aatccatcgaaaaatacaaatgtgcttcagcaggaatcgaagacgttgtttctagttcgacggatgaaagaagttgtcgacgcgctcttcaggtcttgcg 14346131  T
Q  115 gataagaccaaacggttagcaaacggctagctttg-gaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtat 213  Q
    ||||||||||| | |||||||||| ||||| |||| ||||| ||| |||| ||||||||||||||| |||||||||||||||||| ||| |||| |||||    
T  14346130 gataagaccaagcagttagcaaacagctagttttgtgaacggctagtttt-gattttgaatcgaaaggatgtgattaggtagttacaggactatctgtat 14346032  T
Q  214 aaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 313  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14346031 aaatagtagtttttcttaggaaaaaagggtcacaactcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 14345932  T
Q  314 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctt 413  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || |||||||    
T  14345931 gcaaagtatgaatatgtgtaccaattttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatttaagtcttgttttaccaagtctt 14345832  T
Q  414 tttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattc 485  Q
    || ||||||||||||||||||| | | |||||||  | || ||||||||||||||||||||| |||||||||    
T  14345831 ttcaaagtacttcttttcattattgttatttacagaacttagattgaattcaacacggattgaattcgattc 14345760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 15 - 485
Target Start/End: Complemental strand, 14036200 - 14035730
Alignment:
Q  15 aatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttgtg 114  Q
    ||||||||||||||||||| | | |||||||| ||||| |||| ||||||| |||||| || | | | |||| ||||||||| ||| || |||||||| |    
T  14036200 aatccatcgaaaaatacaaatgtgcttcagcaggaatcaaagacgttgtttctagttcgacggatgaaagaagttgtcgacgcgctattcaggtcttgcg 14036101  T
Q  115 gataagaccaaacggttagcaaacggctagctttg-gaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtat 213  Q
    ||||||||||| | |||||||||| ||||| |||| ||||| ||| |||| ||||||||||||||| |||||||||||||||||| ||| |||| |||||    
T  14036100 gataagaccaagcagttagcaaacagctagttttgtgaacggctagtttt-gattttgaatcgaaaggatgtgattaggtagttacaggactatctgtat 14036002  T
Q  214 aaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 313  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14036001 aaatagtagtttttcttaggaaaaaagggtcacaactcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 14035902  T
Q  314 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctt 413  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || |||||||    
T  14035901 gcaaagtatgaatatgtgtaccaaatttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatttaagtcttgttttaccaagtctt 14035802  T
Q  414 tttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattc 485  Q
    || ||||||||||||||||||| | | |||||||  | || ||||||||||||||||||||| |||||||||    
T  14035801 ttcaaagtacttcttttcattattgttatttacagaacttagattgaattcaacacggattgaattcgattc 14035730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 115 - 488
Target Start/End: Complemental strand, 44277900 - 44277526
Alignment:
Q  115 gataagaccaaacggttagcaaacggctagctttggaacgactatttttcgatttt-gaatcgaaaagatgtgattaggtagttatagggctatttgtat 213  Q
    ||||||||||| |||||||||||||||||| ||| ||||| |||  |||||||||| ||||||||| |||||||||||||||||||||| |||| |||||    
T  44277900 gataagaccaagcggttagcaaacggctagttttcgaacggctaagtttcgatttttgaatcgaaaggatgtgattaggtagttataggactatctgtat 44277801  T
Q  214 aaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 313  Q
    |||||||||||||||||||  |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44277800 aaatagtagtttttcttagaaaaaatgggtcacaattcagtcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagtt 44277701  T
Q  314 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctt 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||||    
T  44277700 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgtaattcaagtcttggtttactaagtctt 44277601  T
Q  414 tttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattcttt 488  Q
    || |||||||||| ||  | |  ||| |||||||  |||||||||| ||||||| ||||||||||||||||||||    
T  44277600 ttcaaagtacttccttctactgttattatttacagaatttcgattggattcaactcggattggattcgattcttt 44277526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 161 - 390
Target Start/End: Complemental strand, 18175048 - 18174819
Alignment:
Q  161 tttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatact 260  Q
    ||||||||||  |||||| |||| ||||||||||||||||||  ||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  18175048 tttcgatttttgatcgaatagatatgattaggtagttataggattatctgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatact 18174949  T
Q  261 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 360  Q
    |||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18174948 aaaaacttacactcaatactgtccgtgtgagagcgacaaacgagtcacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 18174849  T
Q  361 caatacaatcttttaaacacttttgcaatt 390  Q
    ||||||| ||||||||||||||||||||||    
T  18174848 caatacagtcttttaaacacttttgcaatt 18174819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 242 - 390
Target Start/End: Complemental strand, 18160197 - 18160049
Alignment:
Q  242 gtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaacttt 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18160197 gtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgtaccaacttt 18160098  T
Q  342 cattaagtctttacaaattcaatacaatcttttaaacacttttgcaatt 390  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18160097 cattaagtctttacaaattcaatacagtcttttaaacacttttgcaatt 18160049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 185 - 390
Target Start/End: Complemental strand, 1978381 - 1978176
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||    
T  1978381 tgattaggtagttataagtctatttgtataaatagtagtttttcttagggaaaacgggtcacaattcaatcatactcaaaatttacactcaatattgtcc 1978282  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacactttt 384  Q
    ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| |||| |||||||||||||| | ||||||| |  ||||||||  |||    
T  1978281 gtatgaaagcgacaaacgagtcacaagttgcaaagtatgaacatgtgtaccaaatttcgttaagtctttacaattccaatacatttctttaaacatcttt 1978182  T
Q  385 gcaatt 390  Q
    ||||||    
T  1978181 gcaatt 1978176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 189 - 367
Target Start/End: Original strand, 15758537 - 15758715
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||| | |||| ||||||||||||||||||||||||| ||||  |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  15758537 taggtagttatatgtctatctgtataaatagtagtttttcttaggaaaaagaggtcacaattcaatcatactcaaaacttacactcaatattgtccgtat 15758636  T
Q  289 ggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||    
T  15758637 ggaagcgacaaacgagtcacaagttgcaaagtatgaacatgtgtaccaaatttcattaagtctttacaattttaataca 15758715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 207 - 367
Target Start/End: Complemental strand, 11989536 - 11989376
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtt 306  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  11989536 tttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaatactatccgtatggaagcgacaaacgagtc 11989437  T
Q  307 acaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    | ||||||||| |||||||  |||| |||||| || ||| ||||  | ||| |||||||||    
T  11989436 ataagttgcaatgtatgaacgtgtgcaccaacctttattcagtcaatgcaatttcaataca 11989376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 204 - 345
Target Start/End: Original strand, 18752644 - 18752782
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||  ||||||||| ||||| | | ||||||||||| ||| ||| ||    
T  18752644 ctatttgtataaatagtaattttttttaggaaaaaagggtcacaattcaatcatac--aaaacttacgctcaa-attatccgtatggaatcgagaaatga 18752740  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    || ||||||||||| |||||||| ||||||||||||| ||||    
T  18752741 gtcacaagttgcaatgtatgaatctgtgtaccaacttacatt 18752782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 40342995 - 40342863
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||||||||| ||||  |||||  ||||||||||||||||||| |||||||||||||||| | | |||| ||||||| || ||||||    
T  40342995 ctatttgtataaatagtagttttccttaatgaaaagtggtcacaattcaatcatacaaaaaacttacactcaa-attatccgcatggaagagagaaacga 40342897  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| ||||||| |||||||||||    
T  40342896 gtcacaagttgcaatgtatgaacatgtgtaccaa 40342863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 204 - 316
Target Start/End: Complemental strand, 24876509 - 24876397
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaa-gggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 302  Q
    ||||||||||||||||||||||| | |||| ||||| |||||||||||||||||||| |||||||||||||||| | | |||| ||||||| || |||||    
T  24876509 ctatttgtataaatagtagttttccctaggaaaaaaagggtcacaattcaatcatacaaaaaacttacactcaa-attatccgcatggaagagagaaacg 24876411  T
Q  303 agttacaagttgca 316  Q
    ||| ||||||||||    
T  24876410 agtcacaagttgca 24876397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 10827940 - 10827806
Alignment:
Q  204 ctatttgtataaatagtagtttttcttaggg--aaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaac 301  Q
    ||||||||||||||||||||||| | || ||  ||||||||||||| | |||||||||  ||||||||||||||| | | |||| ||||||| || ||||    
T  10827940 ctatttgtataaatagtagttttccctaagggaaaaaagggtcacagtccaatcatacacaaaacttacactcaa-attatccgcatggaagagagaaac 10827842  T
Q  302 gagttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    |||| ||||||||||| |||||||| ||||||||||    
T  10827841 gagtcacaagttgcaatgtatgaatctgtgtaccaa 10827806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 11021732 - 11021598
Alignment:
Q  204 ctatttgtataaatagtagtttttcttaggg--aaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaac 301  Q
    ||||||||||||||||||||||| | || ||  ||||||||||||| | |||||||||  ||||||||||||||| | | |||| ||||||| || ||||    
T  11021732 ctatttgtataaatagtagttttccctaagggaaaaaagggtcacagtccaatcatacacaaaacttacactcaa-attatccgcatggaagagagaaac 11021634  T
Q  302 gagttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    |||| ||||||||||| |||||||| ||||||||||    
T  11021633 gagtcacaagttgcaatgtatgaatctgtgtaccaa 11021598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 337
Target Start/End: Complemental strand, 41239358 - 41239234
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttaca 309  Q
    ||||||||| ||||||||| |||  |||||||||||||||||||||||||  ||||||||| ||||| ||| |||| ||   || || |||||||| |||    
T  41239358 gtataaatactagtttttcataga-aaaaagggtcacaattcaatcatacataaaacttacgctcaa-actatccggat-tcagagagaaacgagtaaca 41239262  T
Q  310 agttgcaaagtatgaatatgtgtaccaa 337  Q
    |||  ||| |||||||| ||||||||||    
T  41239261 agtcacaatgtatgaatctgtgtaccaa 41239234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 10478326 - 10478260
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    |||| ||||| ||||| || |||| |||| |||||||||||||| |||||  |||||||||||||||    
T  10478326 gtattaatagaagtttctcataggaaaaacgggtcacaattcaaccatacagaaaacttacactcaa 10478260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 10864187 - 10864237
Alignment:
Q  287 atggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    ||||||| || |||||||| ||||||||||| |||||||| ||||||||||    
T  10864187 atggaagagagaaacgagtcacaagttgcaatgtatgaatctgtgtaccaa 10864237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 276
Target Start/End: Complemental strand, 16713383 - 16713342
Alignment:
Q  235 aaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    |||||||||||||||||||||||||  ||||| |||||||||    
T  16713383 aaaaagggtcacaattcaatcatacagaaaacgtacactcaa 16713342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 276
Target Start/End: Complemental strand, 17687619 - 17687578
Alignment:
Q  235 aaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    |||||||||||||||||||||||||  ||||| |||||||||    
T  17687619 aaaaagggtcacaattcaatcatacagaaaacgtacactcaa 17687578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 320; Significance: 1e-180; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 15 - 485
Target Start/End: Original strand, 18108499 - 18108964
Alignment:
Q  15 aatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttgtg 114  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || | ||| |||| ||||||||| ||||||     ||||||    
T  18108499 aatccatcgaaaaatacaagtgtacttcagcaggaatcgaagaagttgtttttagttcgacggataaaagaagttgtcgacgcgctctt-----cttgtg 18108593  T
Q  115 gataagaccaaacggttagcaaacggctagctttggaacgactatttttcgatttt-gaatcgaaaagatgtgattaggtagttatagggctatttgtat 213  Q
    ||||||||||| |||||||||||||||||| ||  ||||| ||| ||| ||||||| ||||||||| |||||||||||||||||||||| |||| |||||    
T  18108594 gataagaccaagcggttagcaaacggctagtttgtgaacggctagttt-cgatttttgaatcgaaaggatgtgattaggtagttataggactatctgtat 18108692  T
Q  214 aaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 313  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18108693 aaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 18108792  T
Q  314 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| | ||||||||    
T  18108793 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatttaagtcttgttttattaagtctt 18108892  T
Q  414 tttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattc 485  Q
    || |||||||||||||||||| |||| |||||||  | ||| ||||||||||||||||||||||||||||||    
T  18108893 ttcaaagtacttcttttcattgctattatttacagaacttcaattgaattcaacacggattggattcgattc 18108964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 172 - 416
Target Start/End: Complemental strand, 13277394 - 13277151
Alignment:
Q  172 aatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttaca 271  Q
    ||||||| |||| |||| ||| |||||||||  ||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  13277394 aatcgaacagatatgatcaggcagttataggattatttgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatactaaaaacttaca 13277295  T
Q  272 ctcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatct 371  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||| |      
T  13277294 ctcaatactgtccgtatggaagcgacaaacgagtcacgagttgcaaagtatgaatatgtgcaccaattttcattaaatctttacaaattcaatacagttc 13277195  T
Q  372 tttaaacacttttgcaattcaaatcttgtttgactaagtcttttt 416  Q
    ||||||||| ||||||||| || |||| ||| | |||||||||||    
T  13277194 tttaaacacctttgcaatttaagtctt-tttcattaagtcttttt 13277151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 172 - 367
Target Start/End: Complemental strand, 14557103 - 14556908
Alignment:
Q  172 aatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttaca 271  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||  ||||  ||||||||||||||||||||||||| |||||    
T  14557103 aatcgaacagatatgattaggtagttataggactatttgtataaatagtagtttttcttagaaaaaacaggtcacaattcaatcatactaaaaaattaca 14557004  T
Q  272 ctcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  14557003 ctcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatctgtgcatcaactttcattaagtctttacaaattcaataca 14556908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 172 - 367
Target Start/End: Complemental strand, 15153791 - 15153596
Alignment:
Q  172 aatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttaca 271  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||  ||||  ||||||||||| ||||||||||||| |||||    
T  15153791 aatcgaacagatatgattaggtagttataggactatttgtataaatagtagtttttcttagaaaaaacaggtcacaattcgatcatactaaaaaattaca 15153692  T
Q  272 ctcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  15153691 ctcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatctgtgcaccaactttcattaagtctttacaaattcaataca 15153596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 172 - 390
Target Start/End: Complemental strand, 13292772 - 13292554
Alignment:
Q  172 aatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttaca 271  Q
    ||||||| |||| |||| ||| |||||||||  ||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||    
T  13292772 aatcgaacagatatgatcaggcagttataggattatttgtataaatagtagtttttcttaggaaaaacatgtcacaattcaatcatactaaaaacttaca 13292673  T
Q  272 ctcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatct 371  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||| |      
T  13292672 ctcaatactgtccgtatggaagcgacaaacgagtcacgagttgcaaagtatgaatatgtgcaccaattttcattaaatctttacaaattcaatacagttc 13292573  T
Q  372 tttaaacacttttgcaatt 390  Q
    ||||||||| |||||||||    
T  13292572 tttaaacacctttgcaatt 13292554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 213 - 390
Target Start/End: Complemental strand, 14714278 - 14714101
Alignment:
Q  213 taaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagt 312  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  14714278 taaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaatttacacttaatactgtccgtatggaagcgacaaacgagtcacaagt 14714179  T
Q  313 tgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatt 390  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |  ||||||||  |||||||||    
T  14714178 tgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaatacatttctttaaacatctttgcaatt 14714101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 213 - 390
Target Start/End: Complemental strand, 14775958 - 14775781
Alignment:
Q  213 taaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagt 312  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  14775958 taaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaatttacacttaatactgtccgtatggaagcgacaaacgagtcacaagt 14775859  T
Q  313 tgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatt 390  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |  ||||||||  |||||||||    
T  14775858 tgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaatacatttctttaaacatctttgcaatt 14775781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 207 - 345
Target Start/End: Complemental strand, 14022567 - 14022430
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtt 306  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||  ||||||     
T  14022567 tttgtataaatagtagttttttttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaa-attgtccgtatagaagcaactgacgagtc 14022469  T
Q  307 acaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    ||||||||||| |||||||||||||||| ||||| ||||    
T  14022468 acaagttgcaatgtatgaatatgtgtactaacttacatt 14022430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 207 - 345
Target Start/End: Original strand, 1658581 - 1658718
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagg-gtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagt 305  Q
    |||||||||| ||||||||| |||||||||||| | |||||||||| ||||||| |||||||||||||||| | | |||| ||||||| || ||||||||    
T  1658581 tttgtataaacagtagttttccttagggaaaaaagtgtcacaattctatcatac-aaaaacttacactcaa-attatccgcatggaagagagaaacgagt 1658678  T
Q  306 tacaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
     ||||||||||| |||||||||||||||||||||| ||||    
T  1658679 cacaagttgcaatgtatgaatatgtgtaccaacttacatt 1658718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 204 - 345
Target Start/End: Complemental strand, 3078086 - 3077947
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||| |||||||||  ||||| | | ||||||||||||| | ||||||    
T  3078086 ctatttgtataaatagtagtttttcttagaaaaaaaaggtcacaattcaatcatac-aaaaacttaagctcaa-attatccgtatggaagcaagaaacga 3077989  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    |  |||||||| || |||||||| ||||||||||||| ||||    
T  3077988 gccacaagttgtaatgtatgaatctgtgtaccaacttacatt 3077947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 10267216 - 10267346
Alignment:
Q  205 tatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgag 304  Q
    |||||||||||||||||||||| | || ||||||  ||||| ||||||||||||| |||||||||||||||| | | |||| ||||||| || ||||||     
T  10267216 tatttgtataaatagtagttttccctaaggaaaagtggtcaaaattcaatcatac-aaaaacttacactcaa-attatccgcatggaagagagaaacgaa 10267313  T
Q  305 ttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    | ||||||||||| ||||||| |||||||||||    
T  10267314 tcacaagttgcaatgtatgaacatgtgtaccaa 10267346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 18567147 - 18567017
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||||||||| | |||  ||||||| ||||||||| ||||||| |||||||||||||||| | |  ||| ||||||| || ||||||    
T  18567147 ctatttgtataaatagtagttttccctagaaaaaaagg-tcacaattctatcatac-aaaaacttacactcaa-attacccgcatggaagagagaaacga 18567051  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| | |||||||||||||||||    
T  18567050 gtcacaagttgcaatgaatgaatatgtgtaccaa 18567017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 31079906 - 31079772
Alignment:
Q  204 ctatttgtataaatagtagttt--ttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaac 301  Q
    ||||||||||||||||||||||  | |  ||| |||| |||||||||||||||||||| |||||||||||||||| | | |||| ||||||| || ||||    
T  31079906 ctatttgtataaatagtagtttcctccaaaggaaaaaggggtcacaattcaatcatacaaaaaacttacactcaa-attatccgcatggaagagagaaac 31079808  T
Q  302 gagttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    |||| |||| |||||| || |||| |||||||||||    
T  31079807 gagtcacaaattgcaatgtgtgaacatgtgtaccaa 31079772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 211 - 337
Target Start/End: Complemental strand, 49526601 - 49526474
Alignment:
Q  211 tataaatagtagtttttc-ttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgta-tggaagcgacaaacgagttac 308  Q
    |||||||||||||||||| ||||||||||||||| ||||| |||||||||  |||||||||| |||| ||| |||| | |  ||| || |||||||| ||    
T  49526601 tataaatagtagtttttccttagggaaaaagggtgacaatccaatcatacacaaaacttacaatcaa-actatccgcattcaaagagagaaacgagtcac 49526503  T
Q  309 aagttgcaaagtatgaatatgtgtaccaa 337  Q
    ||||||||| ||||||| |||||||||||    
T  49526502 aagttgcaatgtatgaacatgtgtaccaa 49526474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 337
Target Start/End: Original strand, 50687535 - 50687661
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttaca 309  Q
    ||||||||| || |||||| |||| |||| |||||||||  |||||||||  ||||||||||||| |  || |||| ||  ||| ||||||||||| |||    
T  50687535 gtataaataatattttttcataggaaaaacgggtcacaaaccaatcatacacaaaacttacactc-aggctatccgcattcaagagacaaacgagtcaca 50687633  T
Q  310 agttgcaaagtatgaatatgtgtaccaa 337  Q
    ||||  || ||||||| |||||||||||    
T  50687634 agttataatgtatgaacatgtgtaccaa 50687661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 27812465 - 27812399
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    ||||||||| |||||||||  | | |||| ||||||||||||||||||||  |||||||||||||||    
T  27812465 gtataaataatagtttttcacatgaaaaacgggtcacaattcaatcatacagaaaacttacactcaa 27812399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 316; Significance: 1e-178; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 15 - 485
Target Start/End: Complemental strand, 14683473 - 14683008
Alignment:
Q  15 aatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttgtg 114  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||| || | ||| |||| ||||||||| ||||||     ||||||    
T  14683473 aatccatcgaaaaatacaagtgtacttcagcaggaattgaagaagttgtttttagttcgacggataaaagaagttgtcgacgcgctctt-----cttgtg 14683379  T
Q  115 gataagaccaaacggttagcaaacggctagctttggaacgactatttttcgatttt-gaatcgaaaagatgtgattaggtagttatagggctatttgtat 213  Q
    ||||||||||| |||||||||||||||||| ||  ||||| ||| ||| ||||||| ||||||||| |||||||||||||||||||||| |||| |||||    
T  14683378 gataagaccaagcggttagcaaacggctagtttgtgaacggctagttt-cgatttttgaatcgaaaggatgtgattaggtagttataggactatctgtat 14683280  T
Q  214 aaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 313  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14683279 aaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 14683180  T
Q  314 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| | ||||||||    
T  14683179 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatttaagtcttgttttattaagtctt 14683080  T
Q  414 tttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattc 485  Q
    ||  ||||||||||||||||| |||| |||||||  | ||||||||||||||||||||||||||||||||||    
T  14683079 ttccaagtacttcttttcattgctattatttacagaacttcgattgaattcaacacggattggattcgattc 14683008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 12 - 485
Target Start/End: Complemental strand, 7396541 - 7396072
Alignment:
Q  12 aagaatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtctt 111  Q
    |||||||||||||||||||||| | |||||||||| |||||||| |  |||||| |||||| || | | | |||| ||||||||| |||||| ||||||     
T  7396541 aagaatccatcgaaaaatacaaatgtacttcagcaggaatcgaatacattgtttctagttcgacggatgaaagaagttgtcgacgcgctctttaggtctc 7396442  T
Q  112 gtggataagaccaaacggttagcaaacggctagctt--tggaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctattt 209  Q
      ||||||| |||| | |||||||||||||||| ||  || |||| |||  ||||||||||||||||||| ||||  |||||||||||||||| |||| |    
T  7396441 acggataaggccaagcagttagcaaacggctagttttgtgaaacggcta-gtttcgattttgaatcgaaaggatgcaattaggtagttataggactatct 7396343  T
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttaca 309  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7396342 gtataaatagtagtttttcttaggaaaaaaaggtcacaattcaatcatactaaaaacttacgctcaatactgtccgtatggaagcgacaaacgagttaca 7396243  T
Q  310 agttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaag 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||    
T  7396242 agttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatttaagtcttgttttactaag 7396143  T
Q  410 tctttttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattc 485  Q
    |||||| |||||||||||||||||     | |||||||  | ||||||||||||||||||||||||  ||||||||    
T  7396142 tcttttcaaagtacttcttttcat-----ttatttacagaacttcgattgaattcaacacggattgagttcgattc 7396072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 12 - 485
Target Start/End: Complemental strand, 7341795 - 7341326
Alignment:
Q  12 aagaatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtctt 111  Q
    |||||||||||||||||||||| | |||||||||| |||||||| |  |||||| |||||| || | | | |||| ||||||||| |||||| ||||||     
T  7341795 aagaatccatcgaaaaatacaaatgtacttcagcaggaatcgaatacattgtttctagttcgacggatgaaagaagttgtcgacgcgctctttaggtctc 7341696  T
Q  112 gtggataagaccaaacggttagcaaacggctagctt--tggaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctattt 209  Q
      ||||||| |||| | |||||||||||||||| ||  || |||| |||  ||||||||||||||||||| ||||  |||||||||||||||| |||| |    
T  7341695 acggataaggccaagcagttagcaaacggctagttttgtgaaacggcta-gtttcgattttgaatcgaaaggatgcaattaggtagttataggactatct 7341597  T
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttaca 309  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7341596 gtataaatagtagtttttcttaggaaaaaaaggtcacaattcaatcatactaaaaacttacgctcaatactgtccgtatggaagcgacaaacgagttaca 7341497  T
Q  310 agttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaag 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||| ||||||    
T  7341496 agttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaagcacttttgcaatttaagtcttgttttactaag 7341397  T
Q  410 tctttttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattc 485  Q
    |||||| |||||||| ||||||||     | |||||||  | ||||||||||||||||||||||||  ||||||||    
T  7341396 tcttttcaaagtactgcttttcat-----ttatttacagaacttcgattgaattcaacacggattgagttcgattc 7341326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 122 - 488
Target Start/End: Original strand, 10778896 - 10779259
Alignment:
Q  122 ccaaacggttagcaaacggctagctttggaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagta 221  Q
    |||| |||||||||||||||||| ||| ||||| ||| ||| |||||| ||||||||| |||  ||||||||||||| ||| |||| |||||||||||||    
T  10778896 ccaagcggttagcaaacggctagttttcgaacggctagttt-cgattt-gaatcgaaa-gataggattaggtagttacaggactatctgtataaatagta 10778992  T
Q  222 gttttt-cttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagt 320  Q
    |||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10778993 gttttttcttaag-aaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagt 10779091  T
Q  321 atgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctttttaaag 420  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||| |||     
T  10779092 atgaatatgtgtaccaactttccttaagtctttacaaattcaatacaatcttttaaacacttttgcaatttaagtcttgttttactaagtc-tttcaaaa 10779190  T
Q  421 tacttctttt-cattactatcatttacaacatttcgattgaattcaacacggattggattcgattcttt 488  Q
     | ||||||| ||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  10779191 catttcttttacattacagttaattacaacatttcgattgaattcaacacggattggattcgattcttt 10779259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 122 - 488
Target Start/End: Original strand, 10792414 - 10792777
Alignment:
Q  122 ccaaacggttagcaaacggctagctttggaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagta 221  Q
    |||| |||||||||||||||||| ||| ||||| ||| ||| |||||| ||||||||| |||  ||||||||||||| ||| |||| |||||||||||||    
T  10792414 ccaagcggttagcaaacggctagttttcgaacggctagttt-cgattt-gaatcgaaa-gataggattaggtagttacaggactatctgtataaatagta 10792510  T
Q  222 gttttt-cttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagt 320  Q
    |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10792511 gttttttcttaag-aaaaagggtcacaattcaatcatactaaaaacttacactcaatagtgtccgtatggaagcgacaaacgagttacaagttgcaaagt 10792609  T
Q  321 atgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctttttaaag 420  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||| |||     
T  10792610 atgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatttaagtcttgttttactaagtc-tttcaaaa 10792708  T
Q  421 tacttctttt-cattactatcatttacaacatttcgattgaattcaacacggattggattcgattcttt 488  Q
     | ||||||| ||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  10792709 catttcttttacattacagttaattacaacatttcgattgaattcaacacggattggattcgattcttt 10792777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 113 - 488
Target Start/End: Complemental strand, 13299694 - 13299318
Alignment:
Q  113 tggataagaccaaacggttagcaaacggctagctttggaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgta 212  Q
    ||||||||| ||| | |||||||||||||||| |||  |||| ||| ||| |||||||||||||||  ||| |||||||||||||||||| |||| ||||    
T  13299694 tggataagatcaagcagttagcaaacggctag-tttcaaacggctagttt-cgattttgaatcgaacggatatgattaggtagttataggactatctgta 13299597  T
Q  213 taaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagt 312  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  13299596 taaatagtagtttttcttaggaaaaaggggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaatgagtcacaagt 13299497  T
Q  313 tgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacactttt-gcaattcaaatcttgtttg-actaagt 410  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||  |||||||    
T  13299496 tgcaaagtatgaatatgtgcaccaactttcattaagtctttacaaattcaatacaatcttttaaacactttttgcaatttaagtcttgtttttactaagt 13299397  T
Q  411 ctttttaaagtacttc-ttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattcttt 488  Q
    | ||| |||||||||| |||| |||   || || ||||  |||||||||| |||||||||||||||||||| |||||||    
T  13299396 cctttcaaagtacttcctttttattgtcattatctacagaatttcgattggattcaacacggattggattcaattcttt 13299318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 113 - 488
Target Start/End: Complemental strand, 13310352 - 13309976
Alignment:
Q  113 tggataagaccaaacggttagcaaacggctagctttggaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgta 212  Q
    ||||||||| ||| | |||||||||||||||| |||  |||| ||| ||| |||||||||||||||  ||| |||||||||||||||||| |||| ||||    
T  13310352 tggataagatcaagcagttagcaaacggctag-tttcaaacggctagttt-cgattttgaatcgaacggatatgattaggtagttataggactatctgta 13310255  T
Q  213 taaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagt 312  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  13310254 taaatagtagtttttcttaggaaaaaggggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaatgagtcacaagt 13310155  T
Q  313 tgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacactttt-gcaattcaaatcttgtttg-actaagt 410  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||  |||||||    
T  13310154 tgcaaagtatgaatatgtgcaccaactttcattaagtctttacaaattcaatacaatcttttaaacactttttgcaatttaagtcttgtttttactaagt 13310055  T
Q  411 ctttttaaagtacttc-ttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattcttt 488  Q
    | ||| |||||||||| |||| |||   || || ||||  |||||||||| |||||||||||||||||||| |||||||    
T  13310054 cctttcaaagtacttcctttttattgtcattatctacagaatttcgattggattcaacacggattggattcaattcttt 13309976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 113 - 430
Target Start/End: Original strand, 11887164 - 11887477
Alignment:
Q  113 tggataagaccaaacggttagcaaacggctagctttggaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgta 212  Q
    |||||||  |||| |||||||||||||||||| ||| ||||| ||| | | |||||| |||| |||  ||| || ||||||||||||||| |||| ||||    
T  11887164 tggataaagccaagcggttagcaaacggctagttttcgaacggctagtct-cgattt-gaattgaag-gatatgtttaggtagttataggactatctgta 11887260  T
Q  213 taaatagtag-tttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaag 311  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11887261 taaatagtagttttttctta-ggaaaaagggtcacaattcaatcatacttaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaag 11887359  T
Q  312 ttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtc 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| | ||||||    
T  11887360 ttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttacaatttaagtcttgttttattaagtc 11887459  T
Q  412 tttttaaagtacttctttt 430  Q
     ||| ||||||||||||||    
T  11887460 -tttcaaagtacttctttt 11887477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 161 - 390
Target Start/End: Original strand, 10139710 - 10139940
Alignment:
Q  161 tttcgattttgaa-tcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatac 259  Q
    ||||||||||||| ||||| |||| |||||| ||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  10139710 tttcgattttgaaatcgaacagatatgattaagtagttataggactatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatac 10139809  T
Q  260 taaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  10139810 taaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaat 10139909  T
Q  360 tcaatacaatcttttaaacacttttgcaatt 390  Q
    |||||||| |  ||||||||| |||||||||    
T  10139910 tcaatacagttctttaaacacctttgcaatt 10139940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 161 - 390
Target Start/End: Original strand, 10171077 - 10171307
Alignment:
Q  161 tttcgattttgaa-tcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatac 259  Q
    ||||||||||||| ||||| |||| |||||| ||||||||||| |||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  10171077 tttcgattttgaaatcgaacagatatgattaagtagttataggactatttgtgtaaatagtagtttttcttaggaaaaacgggtcacaattcaatcatac 10171176  T
Q  260 taaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  10171177 taaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaat 10171276  T
Q  360 tcaatacaatcttttaaacacttttgcaatt 390  Q
    |||||||| |  ||||||||| |||||||||    
T  10171277 tcaatacagttctttaaacacctttgcaatt 10171307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 207 - 350
Target Start/End: Original strand, 12491913 - 12492056
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtt 306  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||     
T  12491913 tttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactaaataatgtccgtatggaagcgacaaacgagtc 12492012  T
Q  307 acaagttgcaaagtatgaatatgtgtaccaactttcattaagtc 350  Q
    ||||||||||| ||||||| ||||| ||||||||| ||| ||||    
T  12492013 acaagttgcaatgtatgaacatgtgcaccaacttttattcagtc 12492056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 204 - 345
Target Start/End: Complemental strand, 12844711 - 12844571
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  12844711 ctatttatataaatagtagtttttcttagggaaaatgggtcacaattcaatcatactaaaaacttacgctcaa-actgtccgtatggaagcgactaacga 12844613  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    |||||||||||||| ||||||| ||||  |||||||| ||||    
T  12844612 gttacaagttgcaatgtatgaaaatgtacaccaacttacatt 12844571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 207 - 367
Target Start/End: Complemental strand, 12021613 - 12021453
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtt 306  Q
    ||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||| |||     
T  12021613 tttgtataaatagtagtttttcttaggaaaaagaggtcacaattcaatcatactaaaaacttacactcaaaattgttcgtatggaagcgacaaacaagtc 12021514  T
Q  307 acaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||| ||||||||||||| |||||||| |||| |||| |  ||| |||||||||    
T  12021513 acaagttgcaatgtatgaatatgtgcaccaacttacattcagtcatggcaatttcaataca 12021453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 207 - 345
Target Start/End: Original strand, 13023870 - 13024007
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtt 306  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||  ||||||     
T  13023870 tttgtataaaaagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaa-attgtccgtatggaagccactgacgagtc 13023968  T
Q  307 acaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  13023969 acaagttgcaatgtatgaatatgtgtaccaacttacatt 13024007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 43135725 - 43135592
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaag-ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 302  Q
    ||||||||||||||||||||||| | |||| |||||  ||||||||||||||||||| |||||||||||||||| | | |||| ||||||| || |||||    
T  43135725 ctatttgtataaatagtagttttccctaggaaaaaaaaggtcacaattcaatcatacaaaaaacttacactcaa-attatccgcatggaagagagaaacg 43135627  T
Q  303 agttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    ||| |||||||| || ||||||| |||||||||||    
T  43135626 agtcacaagttgtaatgtatgaacatgtgtaccaa 43135592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 132594 - 132461
Alignment:
Q  204 ctatttgtataaatagtagtttttct-tagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 302  Q
    |||||| |||||||||||| |||||  |||| ||||||||||||||||||||||||| |||||||||||| ||| | | |  | ||||||| || |||||    
T  132594 ctatttatataaatagtagcttttccctaggaaaaaagggtcacaattcaatcatacaaaaaacttacacgcaa-attatttgcatggaagagagaaacg 132496  T
Q  303 agttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    ||| ||||||||||| ||||||| |||||||||||    
T  132495 agtcacaagttgcaatgtatgaacatgtgtaccaa 132461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 22444932 - 22444997
Alignment:
Q  207 tttgtataaatagtagt--ttttcttagggaaaaagggtcacaattcaatcatactaaaaacttac 270  Q
    ||||||||||||||| |  |||||||||| |||||||||||||||||||||||| |||||||||||    
T  22444932 tttgtataaatagtattatttttcttaggaaaaaagggtcacaattcaatcatattaaaaacttac 22444997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 449 - 488
Target Start/End: Original strand, 11887536 - 11887575
Alignment:
Q  449 catttcgattgaattcaacacggattggattcgattcttt 488  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11887536 catttcgattgaattcaacacggattggattcgattcttt 11887575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 1934775 - 1934709
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    ||||||||||||||||||| |||| ||||  ||||||||||||||||||   |||||||||||||||    
T  1934775 gtataaatagtagtttttcataggaaaaataggtcacaattcaatcatatataaaacttacactcaa 1934709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 350
Target Start/End: Original strand, 22445013 - 22445060
Alignment:
Q  303 agttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtc 350  Q
    ||||||||||||||| |||||||| ||||||||||||| |||| ||||    
T  22445013 agttacaagttgcaatgtatgaatttgtgtaccaacttacatttagtc 22445060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 480
Target Start/End: Original strand, 10139990 - 10140019
Alignment:
Q  451 tttcgattgaattcaacacggattggattc 480  Q
    ||||||||||||||||||||||||||||||    
T  10139990 tttcgattgaattcaacacggattggattc 10140019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 480
Target Start/End: Original strand, 10171357 - 10171386
Alignment:
Q  451 tttcgattgaattcaacacggattggattc 480  Q
    ||||||||||||||||||||||||||||||    
T  10171357 tttcgattgaattcaacacggattggattc 10171386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 55002474 - 55002437
Alignment:
Q  235 aaaaagggtcacaattcaatcatactaaaaacttacac 272  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  55002474 aaaacgggtcacaattcaatcatacaaaaaacttacac 55002437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 284; Significance: 1e-159; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 15 - 485
Target Start/End: Complemental strand, 16668287 - 16667817
Alignment:
Q  15 aatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttgtg 114  Q
    ||||||||||||||||||| | | |||||||| |||||||| | ||||||| |||||| || | | | |||| ||||||||| ||| || |||||||| |    
T  16668287 aatccatcgaaaaatacaaatgtgcttcagcaggaatcgaaaacgttgtttctagttcgacggatgaaagaagttgtcgacgcgctattcaggtcttgcg 16668188  T
Q  115 gataagaccaaacggttagcaaacggctagctttg-gaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtat 213  Q
    ||||||||||| | |||||||||||||||| |||| ||||| ||| ||| |||||||||||||||| |||||||||||||||| ||||| |||| |||||    
T  16668187 gataagaccaagcagttagcaaacggctagttttgtgaacggctagttt-cgattttgaatcgaaacgatgtgattaggtagtaataggactatctgtat 16668089  T
Q  214 aaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 313  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16668088 aaatagtagtttttcttaggaaaaagtggtcacaattcaatcatactaaaaacttacactcaatactgtccatatggaagcgacaaacgagttacaagtt 16667989  T
Q  314 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctt 413  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||| ||||||||||    
T  16667988 gcaaagtatgaatatgtgtaccaacttttattaagtctttacaaattcaatacaatcttttaaatacttttgcaatttaagtcttgttttactaagtctt 16667889  T
Q  414 tttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattc 485  Q
    || ||||||||||||||||||| | | |||||||  | |||||||||||||||||||||||| |||||||||    
T  16667888 ttcaaagtacttcttttcattattgttatttacagaacttcgattgaattcaacacggattgaattcgattc 16667817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 19 - 488
Target Start/End: Complemental strand, 17426423 - 17425956
Alignment:
Q  19 catcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttgtggata 118  Q
    |||||| ||||||| || ||| |||||| |||||||||||| |||||| ||||| || | | | ||||  ||| |||| || ||| ||||||||||||||    
T  17426423 catcgacaaatacatgtgtacctcagcaggaatcgaagaagctgtttt-agttcgacggatgaaagaagctgtagacgcgc-cttcaggtcttgtggata 17426326  T
Q  119 agaccaaacggttagcaaacggctagctttggaacgactatttttcgatttt-gaatcgaaaagatgtgattaggtagttatagggctatttgtataaat 217  Q
    ||||||| |||||||||||||||||| ||| ||||| |||  || ||||||| ||||||||| |||||||||||||||||||||| |||| |||||||||    
T  17426325 agaccaagcggttagcaaacggctagttttcgaacggctagatt-cgatttttgaatcgaaaggatgtgattaggtagttataggactatctgtataaat 17426227  T
Q  218 agtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaa 317  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17426226 agtagtttttcttaggaaaaatgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaa 17426127  T
Q  318 agtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtcttttta 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||| ||| |    
T  17426126 agtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgtaattcaagtcttgttttactaagtcctttca 17426027  T
Q  418 aagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattcttt 488  Q
    ||||||||| ||| | |   || |||||||  |||||||||| ||||||||||||||||||||||||||||    
T  17426026 aagtacttccttttactgtcattatttacagaatttcgattggattcaacacggattggattcgattcttt 17425956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 115 - 488
Target Start/End: Complemental strand, 20193388 - 20193014
Alignment:
Q  115 gataagaccaaacggttagcaaacggctagctttggaacgactatttttcgatttt-gaatcgaaaagatgtgattaggtagttatagggctatttgtat 213  Q
    ||||||||||| |||||||||||||||||| ||| ||||| |||  |||||||||| ||||||||| |||||||||||||||||||||| |||| |||||    
T  20193388 gataagaccaagcggttagcaaacggctagttttcgaacggctaagtttcgatttttgaatcgaaaggatgtgattaggtagttataggactatctgtat 20193289  T
Q  214 aaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 313  Q
    |||||||||||||||||||  |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20193288 aaatagtagtttttcttagaaaaaatgggtcacaattcagtcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagtt 20193189  T
Q  314 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctt 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||||    
T  20193188 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgtaattcaagtcttggtttactaagtctt 20193089  T
Q  414 tttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattcttt 488  Q
    || |||||||||| ||  | |  ||| |||||||  |||||||||| ||||||| ||||||||||||||||||||    
T  20193088 ttcaaagtacttccttctactgttattatttacagaatttcgattggattcaactcggattggattcgattcttt 20193014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 185 - 390
Target Start/End: Complemental strand, 22352176 - 22351971
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22352176 tgattaggtagttataggactatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtcc 22352077  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacactttt 384  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||||| |||||||||||| |  ||||||||  |||    
T  22352076 gtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtccaccaattttcattaagtctttataaattcaatacatttctttaaacatcttt 22351977  T
Q  385 gcaatt 390  Q
    ||||||    
T  22351976 gcaatt 22351971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 189 - 367
Target Start/End: Complemental strand, 25389141 - 25388963
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  25389141 taggtagttataggtctatttgtataaatagtagtttttcttaggaaaaattggtcacaattcaatcatactcaaaacttacactcaatactgtccgtat 25389042  T
Q  289 ggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| ||||| ||||||||| ||||||||| |||||||||    
T  25389041 ggaagcgacaaacgagtcacaagttgcaaagtatgaacatgtgcaccaattttcattaaatctttacaatttcaataca 25388963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 172 - 390
Target Start/End: Complemental strand, 12821398 - 12821180
Alignment:
Q  172 aatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttaca 271  Q
    |||||||  ||||||| |||||||||||||| |||||||||||||||| ||||||||||||| ||||   ||||||||||||||||||| ||||||||||    
T  12821398 aatcgaatggatgtgactaggtagttataggtctatttgtataaatagcagtttttcttaggaaaaacatgtcacaattcaatcatactcaaaacttaca 12821299  T
Q  272 ctcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatct 371  Q
     ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||| |||||||| |||||| |||  |||||||| | |    
T  12821298 atcaatactgtccgtatggaagcgacaaacgagtcataagttgcaaagtatgaatatgtgcaccaattttcattatgtctttgcaatgtcaatacatttt 12821199  T
Q  372 tttaaacacttttgcaatt 390  Q
    ||||||||  |||||||||    
T  12821198 tttaaacatctttgcaatt 12821180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 207 - 367
Target Start/End: Original strand, 22064583 - 22064743
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtt 306  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||     
T  22064583 tttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacacttaatgatgtccgtatggaagcgacaaacgagtc 22064682  T
Q  307 acaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||| |||||||  |||| ||||||||| ||| ||||  | ||| |||||||||    
T  22064683 acaagttgcaatgtatgaacgtgtgcaccaacttttattcagtcaatgcaatttcaataca 22064743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 204 - 345
Target Start/End: Complemental strand, 29708310 - 29708170
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| | |||| ||||||||||||| |||||    
T  29708310 ctatctgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacgctcaa-attgtctgtatggaagcgactaacga 29708212  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    || ||||||||||| ||||||||||||| |||||||| ||||    
T  29708211 gtcacaagttgcaatgtatgaatatgtgcaccaacttacatt 29708170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 204 - 340
Target Start/End: Complemental strand, 41438988 - 41438853
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | | |||||||||||||||  |||||    
T  41438988 ctatctgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacgctcaa-aatatccgtatggaagcgatgaacga 41438890  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactt 340  Q
    || ||||||||||| |||||||||||| |||||||||    
T  41438889 gtcacaagttgcaatgtatgaatatgtataccaactt 41438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 22698242 - 22698110
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||||| ||||||| |||||||||||||||| | | |||| ||||||| || ||||||    
T  22698242 ctatttgtataaatagtagttttccctaggaaaaaagggtcacaattctatcatacaaaaaacttacactcaa-attatccgcatggaagagagaaacga 22698144  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| ||||||| |||||||||||    
T  22698143 gtcacaagttgcaatgtatgaacatgtgtaccaa 22698110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 18735364 - 18735495
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||||||| | | |||| |||||||  | ||||||    
T  18735364 ctatttgtataaatagtagtttctcttaagaaaaaagggtcacaattcaatcatac-aaaaacttacactcaa-attatccgcatggaagaaagaaacga 18735461  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| |||||||||| ||||||||    
T  18735462 gtcacaagttgcaatgtatgaatatctgtaccaa 18735495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 15337305 - 15337437
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||||||||| | |||||||||| | ||||||||| ||||||| |||||||||||||||| | | |||| ||||||| ||  |||||    
T  15337305 ctatttgtataaatagtagttttccctagggaaaaaagatcacaattctatcatacaaaaaacttacactcaa-attatccgcatggaagagagcaacga 15337403  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| ||||||| |||||||||||    
T  15337404 gtcacaagttgcaatgtatgaacatgtgtaccaa 15337437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 15426370 - 15426502
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||||||||| | |||||||||| | ||||||||| ||||||| |||||||||||||||| | | |||| ||||||| ||  |||||    
T  15426370 ctatttgtataaatagtagttttccctagggaaaaaagatcacaattctatcatacaaaaaacttacactcaa-attatccgcatggaagagagcaacga 15426468  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| ||||||| |||||||||||    
T  15426469 gtcacaagttgcaatgtatgaacatgtgtaccaa 15426502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 15517674 - 15517806
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||||||||| | |||||||||| | ||||||||| ||||||| |||||||||||||||| | | |||| ||||||| ||  |||||    
T  15517674 ctatttgtataaatagtagttttccctagggaaaaaagatcacaattctatcatacaaaaaacttacactcaa-attatccgcatggaagagagcaacga 15517772  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| ||||||| |||||||||||    
T  15517773 gtcacaagttgcaatgtatgaacatgtgtaccaa 15517806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 223
Target Start/End: Original strand, 1735109 - 1735315
Alignment:
Q  13 agaatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttg 112  Q
    ||||||||||||||||||||| |||||||||| | |||||||||| || | |||| |||| ||| ||||  ||| ||||||||| ||  |  | || ||     
T  1735109 agaatccatcgaaaaatacaaatctacttcagaaggaatcgaaga-gtgggtttttgttcgacaagtaaaggaagttgtcgacgcgccttccaagttttt 1735207  T
Q  113 tggataagaccaaacggttagcaaacggctagctttggaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgta 212  Q
    |||||||| |||| |||||||||||||||||| ||| ||||| ||| | | |||||||||||||||  ||| |||||||||||||||||| |||| ||||    
T  1735208 tggataaggccaagcggttagcaaacggctag-tttcgaacggctagtct-cgattttgaatcgaag-gatatgattaggtagttataggactatctgta 1735304  T
Q  213 taaatagtagt 223  Q
    |||||||||||    
T  1735305 taaatagtagt 1735315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 337
Target Start/End: Original strand, 15911712 - 15911838
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttaca 309  Q
    ||||||||||||||||||| || ||||||  ||||||||  |||||||||  ||||||||||||||| ||| |||| ||  ||| || |||||||| |||    
T  15911712 gtataaatagtagtttttcataaggaaaataggtcacaaaccaatcatacacaaaacttacactcaa-actatccgcattcaagagagaaacgagtcaca 15911810  T
Q  310 agttgcaaagtatgaatatgtgtaccaa 337  Q
    |||| ||| ||||||| |||||||||||    
T  15911811 agttacaatgtatgaacatgtgtaccaa 15911838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 27818181 - 27818315
Alignment:
Q  204 ctatttgtataaatagtagttttt-cttagggaaaaagggtcacaattcaatcatactaaaaacttacac-tcaatactgtccgtatggaagcgacaaac 301  Q
    ||||| |||||||||||||||||| ||||||| ||| |||||||||| |||| ||||  ||||||||||| | || ||| ||| |||| ||| || ||||    
T  27818181 ctattagtataaatagtagtttttccttaggg-aaaggggtcacaatccaatgatacacaaaacttacacttaaaaactatccatatgcaagagagaaac 27818279  T
Q  302 gagttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    |||| ||||||||||| ||||||| |||||||||||    
T  27818280 gagtcacaagttgcaatgtatgaacatgtgtaccaa 27818315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 16777947 - 16778013
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    ||||||||| ||||||||| |||| |||| || |||||||||||||||||  |||||||||||||||    
T  16777947 gtataaataatagtttttcataggaaaaacggatcacaattcaatcatacagaaaacttacactcaa 16778013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 22698866 - 22698800
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    |||||||||  ||||| || |||| ||||||||||||||||||| |||||  |||||||||||||||    
T  22698866 gtataaataacagtttctcataggaaaaaagggtcacaattcaaccatacagaaaacttacactcaa 22698800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 24974432 - 24974372
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttac 270  Q
    ||||||||| |||||||||  ||| ||||| |||||||||||||||| ||  |||||||||    
T  24974432 gtataaataatagtttttcaaaggaaaaaaaggtcacaattcaatcacacgcaaaacttac 24974372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 282; Significance: 1e-158; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 12 - 488
Target Start/End: Complemental strand, 41368991 - 41368520
Alignment:
Q  12 aagaatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtctt 111  Q
    |||||||||||||||||||||| |||||||||||| |||||||||| || | |||| |||| ||||||||  ||| ||||||||| ||  |  | || ||    
T  41368991 aagaatccatcgaaaaatacaaatctacttcagcatgaatcgaaga-gtaggtttttgttcgacaggtaaaggaagttgtcgacgcgccttccaagtttt 41368893  T
Q  112 gtggataagaccaaacggttagcaaacggctagctttggaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgt 211  Q
     |||||||| ||||||||||||||||||||||| ||| ||||| ||| | | |||||||||||||||  ||| |||||||||||||||||| |||| |||    
T  41368892 ttggataaggccaaacggttagcaaacggctag-tttcgaacggctagtct-cgattttgaatcgaag-gatatgattaggtagttataggactatctgt 41368796  T
Q  212 ataaatagtagttttt-cttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaa 310  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  41368795 ataaataatagttttttcttagg-aaaaagggtcacaattcaatcatactaaaa-cttacactcaatattgtccgtatggaagcgacaaacgagttacaa 41368698  T
Q  311 gttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagt 410  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||  |||||||    
T  41368697 gttgcaaagtatgaatatgtgtaccaattttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatttaagtcttgttgtactaagt 41368598  T
Q  411 ctttttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattcttt 488  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41368597 ctttttaaagtacttcttttcattgctatcatttacaacatttcgattgaattcaacacggattggatttgattcttt 41368520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 12 - 488
Target Start/End: Complemental strand, 41383898 - 41383424
Alignment:
Q  12 aagaatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtctt 111  Q
    |||||||||||||||||||||| |||||||||||| |||||||||| || | |||| |||| ||||||||  ||| ||||||||| ||  |  | || ||    
T  41383898 aagaatccatcgaaaaatacaaatctacttcagcaggaatcgaaga-gtaggtttttgttcgacaggtaaaggaagttgtcgacgcgccttccaagtttt 41383800  T
Q  112 gtggataagaccaaacggttagcaaacggctagctttggaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgt 211  Q
     |||||||| ||||||||||||||||||||||| |||| |||| ||| | | |||||||||||||||  ||| |||||||||||||||||| |||| |||    
T  41383799 ttggataaggccaaacggttagcaaacggctagttttg-aacggctagtct-cgattttgaatcgaag-gatatgattaggtagttataggactatctgt 41383703  T
Q  212 ataaatagtagttttt-cttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaa 310  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  41383702 ataaataatagttttttcttagg-aaaaagggtcacaattcaatcatactaaaa-cttacactcaatactgtccatatggaagcgacaaacgagttacaa 41383605  T
Q  311 gttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaat---cttttaaacacttttgcaattcaaatcttgtttgacta 407  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||| || |||||||  ||||    
T  41383604 gtcgcaaagtatgaatatgtgtaccaattttcattaagtctttacaaattcaatacaatattcttttaaacacttttgcaatttaagtcttgttgtacta 41383505  T
Q  408 agtctttttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattcttt 488  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41383504 agtctttttaaagtacttcttttcattgctatcatttacaacatttcgattgaattcaacacggattggattcgattcttt 41383424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 15 - 488
Target Start/End: Original strand, 22086205 - 22086676
Alignment:
Q  15 aatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttgtg 114  Q
    |||||||||| ||||||| || ||| |||| | |||||||||||| |||||| ||||| || | | | ||||  ||| |||| || ||| ||||||||||    
T  22086205 aatccatcgacaaatacatgtgtacctcagtaggaatcgaagaagctgtttt-agttcgacggatgaaagaagctgtagacgagc-cttcaggtcttgtg 22086302  T
Q  115 gataagaccaaacggttagcaaacggctagctttggaacgactatttttcgatttt-gaatcgaaaagatgtgattaggtagttatagggctatttgtat 213  Q
    ||||||||||| |||||||||||||||||| | | ||||| ||| ||| ||||||| ||||||||| |||||||||||||||||||||| ||||  ||||    
T  22086303 gataagaccaagcggttagcaaacggctagttctcgaacggctagttt-cgatttttgaatcgaaaggatgtgattaggtagttataggactatccgtat 22086401  T
Q  214 aaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 313  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  22086402 aaatagtagtttttcttaggaaaaatgggtcacaattcaatcatactaaaaacttacacttaatactgtccgtatggaagcgacaaacgagtcacaagtt 22086501  T
Q  314 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctt 413  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||| |||||||| |    
T  22086502 gaaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttatgtaattcaagtcttgttttactaagtcct 22086601  T
Q  414 tttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattcttt 488  Q
    || |||||||||| ||| | |   || |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  22086602 ttcaaagtacttccttttactgtcattatttacaaaatttcgattggattcaacacggattggattcgattcttt 22086676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 189 - 390
Target Start/End: Complemental strand, 22809221 - 22809020
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||| | ||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22809221 taggtagttataagtctatttgtataaatagtggtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 22809122  T
Q  289 ggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaa 388  Q
    |||||| |||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| |  |||||||| ||||||||    
T  22809121 ggaagcaacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaagacatttctttaaacatttttgcaa 22809022  T
Q  389 tt 390  Q
    ||    
T  22809021 tt 22809020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 189 - 390
Target Start/End: Complemental strand, 31845816 - 31845615
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31845816 taggtagttataggtctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactcaaaacttacactcaatactgtccgtat 31845717  T
Q  289 ggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaa 388  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| ||||| ||| ||||||||| |  ||||||||  |||||||    
T  31845716 ggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaaatctttgcaatttcaatacatttctttaaacatctttgcaa 31845617  T
Q  389 tt 390  Q
    ||    
T  31845616 tt 31845615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 185 - 367
Target Start/End: Complemental strand, 1528811 - 1528629
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||| ||||||| | |||||||||||||||| ||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1528811 tgattaggcagttatatgtctatttgtataaatagaagtttttcttacgaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtcc 1528712  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  1528711 gtatggaaacgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaataca 1528629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 167 - 367
Target Start/End: Original strand, 27561854 - 27562054
Alignment:
Q  167 ttttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaac 266  Q
    |||| ||||||| || | |||||||| |||||||||  ||||||||||||||| ||||||||||| | ||||  |||||||||||||| |||| ||||||    
T  27561854 ttttaaatcgaatagttatgattaggcagttataggattatttgtataaatagaagtttttcttaagaaaaacaggtcacaattcaataatacaaaaaac 27561953  T
Q  267 ttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatac 366  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  27561954 ttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgtaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaatac 27562053  T
Q  367 a 367  Q
    |    
T  27562054 a 27562054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 204 - 390
Target Start/End: Original strand, 29305211 - 29305397
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29305211 ctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 29305310  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatt 390  Q
    || ||||||||||||||||||| ||||| ||||| ||||||||||||| |  || ||||||||| |  ||||||||  |||||||||    
T  29305311 gtcacaagttgcaaagtatgaacatgtgcaccaattttcattaagtctatgtaatttcaatacatttctttaaacatctttgcaatt 29305397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 207 - 367
Target Start/End: Original strand, 21310725 - 21310885
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtt 306  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21310725 tttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtc 21310824  T
Q  307 acaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    | ||||||||| ||||||| ||||| ||||||||| ||| ||||  | ||| |||||||||    
T  21310825 agaagttgcaatgtatgaacatgtgcaccaacttttattcagtccatgcaatttcaataca 21310885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 207 - 345
Target Start/End: Complemental strand, 22684778 - 22684640
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtt 306  Q
    ||||||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||     
T  22684778 tttgtataaatagtagttttctttaggaaaacagggtcacaattcaatcatactaaaaacttacgctcaatactgtccgtatggaagcgacaaatgagtc 22684679  T
Q  307 acaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  22684678 acaagttgcaaagtatgaacctgtgtaccaactttcatt 22684640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 210 - 350
Target Start/End: Original strand, 23511609 - 23511748
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttaca 309  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| |||||||| |||    
T  23511609 gtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacgctcaa-actatccgtatggaagcgataaacgagtcaca 23511707  T
Q  310 agttgcaaagtatgaatatgtgtaccaactttcattaagtc 350  Q
    |||||||| |||||||||||||||||||||| |||| ||||    
T  23511708 agttgcaatgtatgaatatgtgtaccaacttacattcagtc 23511748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 204 - 367
Target Start/End: Original strand, 21137648 - 21137810
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||||||| ||||  | |||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| ||||||    
T  21137648 ctatttgtataaatagtagtttttcttaggaaaaactgttcacaattcaatcatactaaaaacttacgctcaa-actatccgtatggaagcgataaacga 21137746  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    || ||||||||||| |||||||||||||||||||||| |||| ||||  | ||| |||||||||    
T  21137747 gtcacaagttgcaatgtatgaatatgtgtaccaacttacattcagtcaatgcaatttcaataca 21137810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 207 - 345
Target Start/End: Original strand, 21076556 - 21076693
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtt 306  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| | | ||||||||||||||||  ||||||     
T  21076556 tttgtataaatagtagtttttcttaggaaaaaatggtcacaattcaatcatactaaaaacttacactcaa-attatccgtatggaagcgactgacgagtc 21076654  T
Q  307 acaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    | ||||||||| |||||||||||||||||||||| ||||    
T  21076655 ataagttgcaatgtatgaatatgtgtaccaacttacatt 21076693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 204 - 333
Target Start/End: Complemental strand, 21168485 - 21168358
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||| | | |||| ||||||| || ||||||    
T  21168485 ctatttgtataaatagtagtttttcttaacgaaaaagggtcacaattcaatcatac-aaaaacttacactcaa-attatccgcatggaagagagaaacga 21168388  T
Q  304 gttacaagttgcaaagtatgaatatgtgta 333  Q
    || ||||||||||| |||||||||||||||    
T  21168387 gtcacaagttgcaatgtatgaatatgtgta 21168358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 204 - 345
Target Start/End: Complemental strand, 4230000 - 4229860
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||||||||| | ||||  |||||||||||||||| ||||||| || ||||||| ||||| ||| |||| ||||||| || ||||||    
T  4230000 ctatttgtataaatagtagttttccctaggagaaaagggtcacaattctatcatacaaataacttacgctcaa-actatccgcatggaagagataaacga 4229902  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    || ||||||||||| |||||||||||||||||||||| ||||    
T  4229901 gtcacaagttgcaatgtatgaatatgtgtaccaacttacatt 4229860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 22794526 - 22794420
Alignment:
Q  284 cgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttt 383  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| |  ||||||||  ||    
T  22794526 cgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaagacatttctttaaacatctt 22794427  T
Q  384 tgcaatt 390  Q
    |||||||    
T  22794426 tgcaatt 22794420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 4361784 - 4361651
Alignment:
Q  204 ctatttgtataaatagtagtttttct-tagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 302  Q
    |||||||||||||||||||||||||  ||| |||||| ||||||||||||||||||| ||||||||| |||||| | | |||| ||||||| || |||||    
T  4361784 ctatttgtataaatagtagtttttccctagcgaaaaaaggtcacaattcaatcatacaaaaaacttatactcaa-attatccgcatggaagagagaaacg 4361686  T
Q  303 agttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    ||| |||||||||||  |||||| |||||||||||    
T  4361685 agtaacaagttgcaatatatgaacatgtgtaccaa 4361651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 345
Target Start/End: Original strand, 50826372 - 50826511
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||| || ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| | | ||||| ||||||||| ||||||    
T  50826372 ctatttgtataaataataatttttcttaggaaaaaagggttacaattcaatcatac-aaaaacttacactcaa-attatccgtttggaagcgagaaacga 50826469  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    || ||| |||||||  ||||||| |||| || ||||| ||||    
T  50826470 gtcacaggttgcaatctatgaatctgtgcactaacttacatt 50826511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 27902012 - 27902144
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||  | || |||| ||||||||| |||||||||  ||||||||||||||| | | |||  ||||||| || ||| ||    
T  27902012 ctatttgtataaatagtagtttttcccaagggaaaaaggtcacaatccaatcatacacaaaacttacactcaa-attatccacatggaagagagaaagga 27902110  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| ||||||| |||||||||||    
T  27902111 gtcacaagttgcaatgtatgaacatgtgtaccaa 27902144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 337
Target Start/End: Original strand, 21550522 - 21550647
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttaca 309  Q
    ||||||||||||||||||| |||| |||| || |||||||||||||||||  ||||||||||||||| ||| |||| ||   || || |||||||| |||    
T  21550522 gtataaatagtagtttttcataggaaaaacggatcacaattcaatcatacagaaaacttacactcaa-actatccgcat-tcagagagaaacgagtaaca 21550619  T
Q  310 agttgcaaagtatgaatatgtgtaccaa 337  Q
    |||  ||| |||||||||||||||||||    
T  21550620 agtcacaatgtatgaatatgtgtaccaa 21550647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 337
Target Start/End: Complemental strand, 2603613 - 2603493
Alignment:
Q  217 tagtagtttttct-tagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgag-ttacaagttg 314  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| ||||||||| |||||| | | |||| ||||||| || ||||||| | ||||||||    
T  2603613 tagtagtttttctgtagggaaaaagggttacaattcaatcatac-aaaaacttaaactcaa-attatccgcatggaagagagaaacgagatcacaagttg 2603516  T
Q  315 caaagtatgaatatgtgtaccaa 337  Q
    ||| ||||||| |||| ||||||    
T  2603515 caatgtatgaacatgtataccaa 2603493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 21382187 - 21382054
Alignment:
Q  204 ctatttgtataaatagtagtttt-tcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 302  Q
    ||||||||||||||||| ||||  ||  | |||||| ||||||| |||||||||||| |||| ||||||||||| | | | || ||||||| || |||||    
T  21382187 ctatttgtataaatagtggtttcctccaaaggaaaaggggtcacgattcaatcatacaaaaagcttacactcaa-attattcgcatggaagagagaaacg 21382089  T
Q  303 agttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    ||| ||||||| ||| ||||||| |||||||||||    
T  21382088 agtcacaagttacaatgtatgaacatgtgtaccaa 21382054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 337
Target Start/End: Original strand, 27131705 - 27131831
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttaca 309  Q
    |||||||||||||||| ||  | || |||  ||||||||| | |||||||  ||||||||||||||| | | |||  ||||||| || |||||||| |||    
T  27131705 gtataaatagtagtttatcgcaagggaaagtggtcacaatcctatcatacacaaaacttacactcaa-attatcctcatggaagagagaaacgagtcaca 27131803  T
Q  310 agttgcaaagtatgaatatgtgtaccaa 337  Q
    |||||||  ||||||| |||||||||||    
T  27131804 agttgcactgtatgaacatgtgtaccaa 27131831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 270; Significance: 1e-150; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 15 - 488
Target Start/End: Complemental strand, 46597 - 46126
Alignment:
Q  15 aatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttgtg 114  Q
    |||||||||| ||||||| || ||| |||||| |||||||||||| |||||| ||||| || | | | ||||  ||| |||| || ||| ||||||||||    
T  46597 aatccatcgacaaatacatgtgtacctcagcaggaatcgaagaagctgtttt-agttcgacggatgaaagaagctgtagacgcgc-cttcaggtcttgtg 46500  T
Q  115 gataagaccaaacggttagcaaacggctagctttggaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtata 214  Q
    |||||||||||  ||||||||||||||||| ||| ||||| ||| ||||   ||||||||||||| |||||||||||||||||||||| |||| ||||||    
T  46499 gataagaccaagtggttagcaaacggctagttttcgaacggctagttttgatttttgaatcgaaaggatgtgattaggtagttataggactatctgtata 46400  T
Q  215 aatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttg 314  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46399 aatagtagtttttcttaggaaaaatgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttg 46300  T
Q  315 caaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtcttt 414  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||| ||    
T  46299 caaagtatgtatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgtaattcaagtcttgttttactaagtcctt 46200  T
Q  415 ttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattcttt 488  Q
    | |||||||||| ||| | |   || |||||||  |||||||||| ||||||||||||||||||||||||||||    
T  46199 tcaaagtacttccttttactgtcattatttacagaatttcgattggattcaacacggattggattcgattcttt 46126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 15 - 385
Target Start/End: Complemental strand, 51235 - 50867
Alignment:
Q  15 aatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttgtg 114  Q
    |||||||||| ||||||| || ||| |||||| |||||||||||| |||||| ||||| || | | | ||||  ||| |||| || ||| ||||||||||    
T  51235 aatccatcgacaaatacatgtgtacctcagcaggaatcgaagaagctgtttt-agttcgacggatgaaagaagctgtagacgcgc-cttcaggtcttgtg 51138  T
Q  115 gataagaccaaacggttagcaaacggctagctttggaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtata 214  Q
    |||||||||||  ||||||||||||||||| ||| ||||| ||| ||||   ||||||||||||| |||||||||||||||||||||| |||| ||||||    
T  51137 gataagaccaagtggttagcaaacggctagttttcgaacggctagttttgatttttgaatcgaaaggatgtgattaggtagttataggactatctgtata 51038  T
Q  215 aatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttg 314  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  51037 aatagtagtttttcttaggaaaaatgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttg 50938  T
Q  315 caaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttg 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50937 caaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttg 50867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 15 - 488
Target Start/End: Original strand, 5434 - 5905
Alignment:
Q  15 aatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttgtg 114  Q
    |||||||||| ||||||| || ||| |||| | |||||||||||| |||||| ||||| || | | | |||| ||||||||| || ||| | ||||||||    
T  5434 aatccatcgacaaatacatgtgtacctcagtaggaatcgaagaagctgtttt-agttcgacggatgaaagaagttgtcgacgcgc-cttcatgtcttgtg 5531  T
Q  115 gataagaccaaacggttagcaaacggctagctttggaacgactatttttcgatttt-gaatcgaaaagatgtgattaggtagttatagggctatttgtat 213  Q
    ||||||||||| |||||||||||| ||||| ||| ||||| ||| ||| ||||||| ||||||||| |||| ||||||||||||||||| |||| |||||    
T  5532 gataagaccaagcggttagcaaacagctagttttcgaacggctagttt-cgatttttgaatcgaaaggatgggattaggtagttataggactatctgtat 5630  T
Q  214 aaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 313  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5631 aaatagtagtttttcttaggaaaaatgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagtt 5730  T
Q  314 gcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctt 413  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||| |    
T  5731 gtaaagtatgaatatgtgtaccaactttcattaagtctttaaaaattcaatacaatcttttaaacacttttgtaattcaagtcttgttttactaagtcct 5830  T
Q  414 tttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattcttt 488  Q
    || |||||||||| ||| | |   || |||||||  |||||||||| ||||||||||||||||||||||||||||    
T  5831 ttcaaagtacttccttttactgtcattatttacagaatttcgattggattcaacacggattggattcgattcttt 5905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 246; Significance: 1e-136; HSPs: 3)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 15 - 485
Target Start/End: Complemental strand, 28842 - 28390
Alignment:
Q  15 aatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttgtg 114  Q
    |||||||||| ||||||| || ||| |||||| |||||||||||| | |||| ||||| |||| | | |||| ||||||||| || ||| ||||||||||    
T  28842 aatccatcgacaaatacatgtgtacctcagcaggaatcgaagaagctatttt-agttcgacagatgaaagaagttgtcgacgcgc-cttcaggtcttgtg 28745  T
Q  115 gataagaccaaacggttagcaaacggctagctttggaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtata 214  Q
     |||||||||| ||||||||||| ||||||                ||||||||||||||||||| |||| ||||||||||||||||| |||| ||||||    
T  28744 aataagaccaagcggttagcaaatggctag----------------tttcgattttgaatcgaaaggatgcgattaggtagttataggactatctgtata 28661  T
Q  215 aatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttg 314  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  28660 aatagtagtttttcttaggaaaaaggggtcataattcaatcatactaaaaacttacacacaatactgcccgtatggaagcgacaaacgagtcacaagttg 28561  T
Q  315 caaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtcttt 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||    
T  28560 caaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatttaagtcttgttttactaagtcttt 28461  T
Q  415 ttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattc 485  Q
    | |||||||||| ||| |||  ||| |||||||  |||||||||| |||||||||||||||||||||||||    
T  28460 tcaaagtacttccttttattgttattatttacagaatttcgattggattcaacacggattggattcgattc 28390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 161 - 480
Target Start/End: Original strand, 39805 - 40123
Alignment:
Q  161 tttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatact 260  Q
    ||||||||||||||| || |||| ||||||||||||||||||  ||| ||||||||||||||||||||||||| ||||  |||||||||||||||||||     
T  39805 tttcgattttgaatcaaacagatatgattaggtagttataggattatctgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcataca 39904  T
Q  261 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39905 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcgaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 40004  T
Q  361 caatacaatcttttaaacac-ttttgcaattcaaatcttgtttgactaagtctttttaaagtacttcttttcattactatcatttacaacatttcgattg 459  Q
    ||||||| || ||||||||| |||||||||| || |||  ||| | ||||||||||  ||||| ||  ||  |||   ||  ||||||  ||||||||||    
T  40005 caatacagtcctttaaacactttttgcaatttaagtct--ttttattaagtcttttcgaagtattttcttctattgtcattctttacagaatttcgattg 40102  T
Q  460 aattcaacacggattggattc 480  Q
     ||||||||||||||||||||    
T  40103 gattcaacacggattggattc 40123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 189 - 390
Target Start/End: Complemental strand, 29498 - 29297
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  29498 taggtagttataggtctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactcaaaacttacactcaatactgttcgtat 29399  T
Q  289 ggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaa 388  Q
    | ||||||||||||||| |||||||| |||||||||||||||| ||||| ||||||||||||||| |||  |||||||| |  ||||||||  |||||||    
T  29398 gaaagcgacaaacgagtcacaagttgaaaagtatgaatatgtgcaccaattttcattaagtctttgcaatgtcaatacatttctttaaacatctttgcaa 29299  T
Q  389 tt 390  Q
    ||    
T  29298 tt 29297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 233; Significance: 1e-128; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 114 - 485
Target Start/End: Complemental strand, 15555 - 15189
Alignment:
Q  114 ggataagaccaaacggttagcaaacggctagctttg-gaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgta 212  Q
    ||||||| |||| | |||||||||||||||| |||| ||||| ||| ||| |||||||||||||||| |||||||||||||||||||||| |||| ||||    
T  15555 ggataaggccaagcagttagcaaacggctagttttgtgaacggctagttt-cgattttgaatcgaaaggatgtgattaggtagttataggactatctgta 15457  T
Q  213 taaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagt 312  Q
    ||||||||||||||| ||| |  |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15456 taaatagtagttttttttatgataaaatggtcacaattcaatcatactaaaaacttacgctcaatactgtccgtatggaagcgacaaacgagttacaagt 15357  T
Q  313 tgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtct 412  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||    
T  15356 tgcaaagtattaatatgtttaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatttaagtcttgttttactaagtct 15257  T
Q  413 ttttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattc 485  Q
    ||| |||||||||||||||||     | |||||||  | |||||||||||||||||||||||| |||||||||    
T  15256 tttcaaagtacttcttttcat-----ttatttacagaacttcgattgaattcaacacggattgaattcgattc 15189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 196; Significance: 1e-106; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 250 - 485
Target Start/End: Complemental strand, 16310197 - 16309962
Alignment:
Q  250 tcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagt 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16310197 tcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagt 16310098  T
Q  350 ctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctttttaaagtacttcttttcattactatcatttacaac 449  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||| ||||||||||||||||||| ||| |||||||      
T  16310097 ctttacaaattcaatacaatcttttaaacacttttgcaatttaagtcttgttttactaagtcttttcaaagtacttcttttcattattattatttacaga 16309998  T
Q  450 atttcgattgaattcaacacggattggattcgattc 485  Q
    | |||||||||||||||||||||||| |||||||||    
T  16309997 acttcgattgaattcaacacggattgaattcgattc 16309962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 161 - 480
Target Start/End: Original strand, 23431860 - 23432177
Alignment:
Q  161 tttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatact 260  Q
    ||||||||||||||| || |||| ||||||||||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  23431860 tttcgattttgaatctaatagatatgattaggtagttataggattatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatact 23431959  T
Q  261 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 360  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23431960 aaaaacttacactcaatattgttcgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 23432059  T
Q  361 caatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctttttaaagtacttcttttcattactatcatttacaacatttcgattga 460  Q
    || |||| |  ||||||||||||| |||||||| |||  ||| | ||||||||||  ||||| ||  ||  |||   ||  ||||||  |||||||||||    
T  23432060 cagtacagttctttaaacacttttacaattcaagtct--ttttattaagtcttttcgaagtattttcttctattgtcattctttacagaatttcgattga 23432157  T
Q  461 attcaacacggattggattc 480  Q
    ||||||||||||||||||||    
T  23432158 attcaacacggattggattc 23432177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 169 - 398
Target Start/End: Original strand, 23490908 - 23491137
Alignment:
Q  169 ttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaactt 268  Q
    |||||||||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  23490908 ttgaatcgaatagatatgattaggtagttataggattatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaactt 23491007  T
Q  269 acactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaa 368  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  23491008 acactcaatactttccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgtaccaactctcattaagtctttacaaattcaatacag 23491107  T
Q  369 tcttttaaacacttttgcaattcaaatctt 398  Q
    |  ||||||||||||| |||||||| ||||    
T  23491108 ttctttaaacacttttacaattcaagtctt 23491137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 169 - 398
Target Start/End: Original strand, 23496506 - 23496735
Alignment:
Q  169 ttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaactt 268  Q
    |||||||||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  23496506 ttgaatcgaatagatatgattaggtagttataggattatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaactt 23496605  T
Q  269 acactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaa 368  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  23496606 acactcaatactatccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgtaccaactctcattaagtctttacaaattcaatacag 23496705  T
Q  369 tcttttaaacacttttgcaattcaaatctt 398  Q
    |  ||||||||||||| |||||||| ||||    
T  23496706 ttctttaaacacttttacaattcaagtctt 23496735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 185 - 390
Target Start/End: Original strand, 16209767 - 16209972
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  16209767 tgattaggtagttataggtctatttgtataaatagtagtttttcttaggaaaaacgggtcacagttcaatcatactaaaaacttacactcaatactgtcc 16209866  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacactttt 384  Q
     |||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |  ||||||||  |||    
T  16209867 atatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaatacatttctttaaacatcttt 16209966  T
Q  385 gcaatt 390  Q
    ||||||    
T  16209967 gcaatt 16209972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 172 - 367
Target Start/End: Complemental strand, 19025562 - 19025367
Alignment:
Q  172 aatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttaca 271  Q
    ||||||| || | |||||||| ||||||||   ||||||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  19025562 aatcgaatagttatgattaggcagttatagaattatttgtataaatagaagtttttcttaagaaaaacgggtcacaattcaatcatactaaaaacttaca 19025463  T
Q  272 ctcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  19025462 ctcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaataca 19025367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 172 - 367
Target Start/End: Complemental strand, 30755701 - 30755506
Alignment:
Q  172 aatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttaca 271  Q
    ||||||| || | |||||||||||||||| | |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  30755701 aatcgaatagttatgattaggtagttataagtctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactcaaaacttaca 30755602  T
Q  272 ctcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| ||| |||||||||    
T  30755601 ctcaatattgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttgcaatttcaataca 30755506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 172 - 367
Target Start/End: Complemental strand, 19038605 - 19038410
Alignment:
Q  172 aatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttaca 271  Q
    ||||||| || | |||||||| ||||||||   ||||||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  19038605 aatcgaatagttatgattaggcagttatagaattatttgtataaatagaagtttttcttaagaaaaacgggtcacaattcaatcatactaaaaacttaca 19038506  T
Q  272 ctcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  19038505 ctcaatattgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaataca 19038410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 204 - 367
Target Start/End: Complemental strand, 19405926 - 19405763
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19405926 ctatttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 19405827  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    || ||||||||||||||||||| ||||| ||||||||||||||||||  | ||| |||||||||    
T  19405826 gtcacaagttgcaaagtatgaacatgtgcaccaactttcattaagtcaatgcaatttcaataca 19405763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 189 - 367
Target Start/End: Complemental strand, 1557838 - 1557660
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||| | |||| ||||||||||||||||||||||||| ||||  |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  1557838 taggtagttatatgtctatctgtataaatagtagtttttcttaggaaaaagaggtcacaattcaatcatactcaaaacttacactcaatattgtccgtat 1557739  T
Q  289 ggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||    
T  1557738 ggaagcgacaaacgagtcacaagttgcaaagtatgaacatgtgtaccaaatttcattaagtctttacaattttaataca 1557660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 345
Target Start/End: Original strand, 11794094 - 11794234
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||| |||||||||||||||||| | |||| |||||||||||||||||||| |||| ||||| |||||||||| | | |||| |||||||  | ||||||    
T  11794094 ctatatgtataaatagtagttttccataggaaaaaagggtcacaattcaattatacaaaaaatttacactcaa-attatccgcatggaagatataaacga 11794192  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
     | ||||||||||| ||||||| |||||||||||||| ||||    
T  11794193 atcacaagttgcaatgtatgaacatgtgtaccaacttacatt 11794234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 204 - 333
Target Start/End: Complemental strand, 18258248 - 18258120
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||| | |||| ||||| |||||||||| | | |||| ||| ||| || ||||||    
T  18258248 ctatttgtataaatagtagttttccttagaaaaaaagggtcacaattcattaatacaaaaaagttacactcaa-attatccgcatgaaagagagaaacga 18258150  T
Q  304 gttacaagttgcaaagtatgaatatgtgta 333  Q
    || ||||||||||| ||||||| |||||||    
T  18258149 gtcacaagttgcaatgtatgaacatgtgta 18258120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 16597389 - 16597257
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||  |||||||||||| || ||||||  ||| ||||| ||||||||  |||||||||||||||| | | |||| |||||||  | ||||||    
T  16597389 ctatttgtatacgtagtagtttttcctaaggaaaacaggtgacaatccaatcatataaaaaacttacactcaa-attatccgcatggaagaaagaaacga 16597291  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| ||||||| |||||||||||    
T  16597290 gtgacaagttgcaatgtatgaacatgtgtaccaa 16597257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 26460729 - 26460597
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||| |||||||||||||||| ||  | || |||  ||||||||| |||||||||  ||||||||||||||| | | |||| ||||||| || ||||||    
T  26460729 ctattagtataaatagtagtttctcgcaagggaaagtggtcacaatccaatcatacacaaaacttacactcaa-attatccgcatggaagagataaacga 26460631  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| ||||||| |||||||||||    
T  26460630 gtcacaagttgcaatgtatgaacatgtgtaccaa 26460597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 19272454 - 19272323
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||| |||||||||||||||| ||  | |  |||| ||||||||| |||||||||  ||||||||||||||| | | || | ||||||| || ||||||    
T  19272454 ctattagtataaatagtagtttctcgcaagagaaaacggtcacaatccaatcatacacaaaacttacactcaa-attatctgcatggaagagagaaacga 19272356  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||| | ||||||| |||||||||||    
T  19272355 gtcacaagttgc-atgtatgaacatgtgtaccaa 19272323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 179; Significance: 2e-96; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 168 - 402
Target Start/End: Original strand, 4469 - 4703
Alignment:
Q  168 tttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaact 267  Q
    |||||||||||  |||  ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||  |||||||||||||||||||||||| ||    
T  4469 tttgaatcgaacggatacgattaggtagttataggactatctgtataaatagtagtttttcttaggaaaaagaggtcacaattcaatcatactaaaatct 4568  T
Q  268 tacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4569 tacactcaatactgtcagtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 4668  T
Q  368 atcttttaaacacttttgcaattcaaatcttgttt 402  Q
    ||||||||||||||||||||||| || ||||||||    
T  4669 atcttttaaacacttttgcaatttaagtcttgttt 4703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 178; Significance: 8e-96; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 161 - 398
Target Start/End: Original strand, 58447 - 58684
Alignment:
Q  161 tttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatact 260  Q
    |||||||||| ||||||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  58447 tttcgattttaaatcgaacagatatgattaggtagttataggattatttgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatact 58546  T
Q  261 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  58547 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatctgtgtaccaattttcattaagtctttacaaatt 58646  T
Q  361 caatacaatcttttaaacacttttgcaattcaaatctt 398  Q
    ||||||| | |||||||||| ||||||||| |||||||    
T  58647 caatacagttttttaaacacctttgcaatttaaatctt 58684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 174; Significance: 2e-93; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 161 - 390
Target Start/End: Original strand, 22648523 - 22648752
Alignment:
Q  161 tttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatact 260  Q
    |||||||||||||||||| |||| ||||||||||||| ||||  ||| ||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  22648523 tttcgattttgaatcgaatagatatgattaggtagttctaggattatctgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatact 22648622  T
Q  261 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22648623 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 22648722  T
Q  361 caatacaatcttttaaacacttttgcaatt 390  Q
    ||||||| |  ||||||||||||| |||||    
T  22648723 caatacagttctttaaacactttttcaatt 22648752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 161 - 390
Target Start/End: Complemental strand, 23204054 - 23203825
Alignment:
Q  161 tttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatact 260  Q
    |||||||||||||||||| |||| ||||||||||||||||||  ||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  23204054 tttcgattttgaatcgaatagatatgattaggtagttataggattatctgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcgtact 23203955  T
Q  261 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 360  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23203954 aaaaacttacactcaatactgtccgtatggaagcgacaaatgagtcacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 23203855  T
Q  361 caatacaatcttttaaacacttttgcaatt 390  Q
    |||||||    |||||||||||||||||||    
T  23203854 caatacagctctttaaacacttttgcaatt 23203825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 161 - 480
Target Start/End: Complemental strand, 23190438 - 23190121
Alignment:
Q  161 tttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatact 260  Q
    |||||||||||||||||| |||| ||||||||||||||||||  ||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  23190438 tttcgattttgaatcgaatagatatgattaggtagttataggattatctgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcgtact 23190339  T
Q  261 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  23190338 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgtacaaactttcattaagtatttacaaatt 23190239  T
Q  361 caatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctttttaaagtacttcttttcattactatcatttacaacatttcgattga 460  Q
    |||||||    ||||||||||||||||||| || |||  ||| | ||||||||||  ||||| ||  ||  |||   ||  ||||||  ||||||||||     
T  23190238 caatacagctctttaaacacttttgcaatttaagtct--ttttattaagtcttttcgaagtattttcttctattgtcattctttacagaatttcgattgg 23190141  T
Q  461 attcaacacggattggattc 480  Q
    ||||||||||||||||||||    
T  23190140 attcaacacggattggattc 23190121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 161 - 480
Target Start/End: Complemental strand, 23611693 - 23611376
Alignment:
Q  161 tttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatact 260  Q
    |||||||||||||||||| |||| ||||||||||||||||||  ||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  23611693 tttcgattttgaatcgaatagatatgattaggtagttataggattatctgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcgtact 23611594  T
Q  261 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  23611593 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgtacaaactttcattaagtatttacaaatt 23611494  T
Q  361 caatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctttttaaagtacttcttttcattactatcatttacaacatttcgattga 460  Q
    |||||||    ||||||||||||||||||| || |||  ||| | ||||||||||  ||||| ||  ||  |||   ||  ||||||  ||||||||||     
T  23611493 caatacagctctttaaacacttttgcaatttaagtct--ttttattaagtcttttcgaagtattttcttctattgtcattctttacagaatttcgattgg 23611396  T
Q  461 attcaacacggattggattc 480  Q
    ||||||||||||||||||||    
T  23611395 attcaacacggattggattc 23611376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 164 - 390
Target Start/End: Complemental strand, 23615295 - 23615069
Alignment:
Q  164 cgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaa 263  Q
    ||||||||||||||| |||| || |||||||||||||||  ||  ||||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  23615295 cgattttgaatcgaacagatatgtttaggtagttataggattacctgtataaatagtagtttttcttaggaaaaataggtcacaattcaatcatactaaa 23615196  T
Q  264 aacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaa 363  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  23615195 aacttacactcaatactgtctgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgtaccaaccttcattaaatctttacaaattcaa 23615096  T
Q  364 tacaatcttttaaacacttttgcaatt 390  Q
    |||| |  |||||||||||||||||||    
T  23615095 tacagttctttaaacacttttgcaatt 23615069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 21 - 291
Target Start/End: Original strand, 24967339 - 24967609
Alignment:
Q  21 tcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttgtggataag 120  Q
    ||||||||||||| | | |||||||| |||||||| | ||||||| |||||| || | | | |||| ||||||||| |||||| |||||||  | |||||    
T  24967339 tcgaaaaatacaaatgtgcttcagcaggaatcgaatacgttgtttctagttcgacggatgaaagaagttgtcgacgcgctctttaggtcttacgtataag 24967438  T
Q  121 accaaacggttagcaaacggctagctttg-gaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatag 219  Q
     |||| | |||||||||||||||| |||| ||||| ||| ||| |||||||||||||||| |||||||||||||||||||||| |||| |||||||||||    
T  24967439 gccaagcagttagcaaacggctagttttgtgaacggctagttt-cgattttgaatcgaaaggatgtgattaggtagttataggactatctgtataaatag 24967537  T
Q  220 tagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatgga 291  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24967538 tagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatgga 24967609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 189 - 390
Target Start/End: Original strand, 24896611 - 24896812
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||| | |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  24896611 taggtagttataagtctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactcaaaacttacactcaatactgttcgtat 24896710  T
Q  289 ggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaa 388  Q
    ||||||||||||| ||| ||||||||||||||||||| ||||| ||||| ||||||||||||||| ||| ||||||||| |  ||||||||  |||||||    
T  24896711 ggaagcgacaaactagtcacaagttgcaaagtatgaacatgtgcaccaattttcattaagtctttgcaatttcaatacatttctttaaacatctttgcaa 24896810  T
Q  389 tt 390  Q
    ||    
T  24896811 tt 24896812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 161 - 326
Target Start/End: Original strand, 22633774 - 22633939
Alignment:
Q  161 tttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatact 260  Q
    |||||||||||||||||| |||| ||||||||||||||||||  ||| |||||||||||||||||||||| || ||||  ||||||||||||||||||||    
T  22633774 tttcgattttgaatcgaatagatatgattaggtagttataggattatctgtataaatagtagtttttctttggaaaaacaggtcacaattcaatcatact 22633873  T
Q  261 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaat 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22633874 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaat 22633939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 207 - 367
Target Start/End: Complemental strand, 39227591 - 39227431
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtt 306  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |     
T  39227591 tttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaatcgacaaacgaatc 39227492  T
Q  307 acaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||| ||||||| ||||| ||||||||| ||| ||||  | ||| |||||||||    
T  39227491 acaagttgcaatgtatgaacatgtgcaccaacttttattcagtcaatgcaatttcaataca 39227431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 24963768 - 24963937
Alignment:
Q  316 aaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatcttgtttgactaagtctttt 415  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||| |||||||||| |    
T  24963768 aaagtatgaacatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgtaatttaagtcttgttttactaagtcttgt 24963867  T
Q  416 taaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattc 485  Q
      ||||||||||||| |||| | | |||||||  | |||||||||||||||||||||||| |||||||||    
T  24963868 cgaagtacttctttttattattgttatttacagaacttcgattgaattcaacacggattgaattcgattc 24963937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 231
Target Start/End: Original strand, 24954144 - 24954360
Alignment:
Q  15 aatccatcgaaaaatacaagtctacttcagcaagaatcgaagaagttgtttttagttctacaggtaagagaaattgtcgacgtgctcttaaggtcttgtg 114  Q
    ||||||||||||||||||| | | |||||||| |||||||| | ||||||| |||||| || | | | |||| ||||||||| |||||| |||||||  |    
T  24954144 aatccatcgaaaaatacaaatgtgcttcagcaggaatcgaatacgttgtttctagttcgacggatgaaagaagttgtcgacgcgctctttaggtcttacg 24954243  T
Q  115 gataagaccaaacggttagcaaacggctagctttg-gaacgactatttttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtat 213  Q
     ||||| |||| | |||||||||||||||| |||| ||||| ||| ||| |||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  24954244 tataaggccaagcagttagcaaacggctagttttgtgaacggctagttt-cgattttgaatcgaaaggatgtgattaggtagttataggactatctgtat 24954342  T
Q  214 aaatagtagtttttctta 231  Q
    ||||||||||||||||||    
T  24954343 aaatagtagtttttctta 24954360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 204 - 338
Target Start/End: Complemental strand, 16664823 - 16664690
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| ||||||    
T  16664823 ctatttgtataaatagtagtttttcttagaaaaaaagggtcacaattcaatcatactaaaaacttacgctcaa-actatccgtatggaagcgataaacga 16664725  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaac 338  Q
    || ||||||||||| |||||||| | |||||||||    
T  16664724 gtcacaagttgcaatgtatgaatctatgtaccaac 16664690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 22880937 - 22881069
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||  ||||| ||| |||||||| |||||| ||||||    
T  22880937 ctatttgtataaatagtagtttttcttaggaaaaaagtgtcacaattcaatcatactaaaaacatatgctcaa-actatccgtatgaaagcgataaacga 22881035  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| |||||||||||||||||||    
T  22881036 gtcacaagttgcaatgtatgaatatgtgtaccaa 22881069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 204 - 350
Target Start/End: Original strand, 31817908 - 31818053
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||| ||||||||||||||||||||||| | |||| |||||||||||||||| ||||||||| |||| ||||| ||| ||||||||||||||| ||||||    
T  31817908 ctatctgtataaatagtagtttttcttatgaaaaacgggtcacaattcaatcgtactaaaaatttacgctcaa-actatccgtatggaagcgataaacga 31818006  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtc 350  Q
    || |||||||||||  |||||||||| |||||||||| |||| ||||    
T  31818007 gtcacaagttgcaatatatgaatatgagtaccaacttacattcagtc 31818053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 37130394 - 37130527
Alignment:
Q  204 ctatttgtataaatagtagtttttct-tagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 302  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||||| |||| | | |||| ||||||| || |||||    
T  37130394 ctatttgtataaatagtagtttttccctagggaaaaagggtcgcaattcaatcatacaaaaaacttacaatcaa-attatccgcatggaagagagaaacg 37130492  T
Q  303 agttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    ||| ||||||||||| ||||||| |||||||||||    
T  37130493 agtcacaagttgcaatgtatgaacatgtgtaccaa 37130527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 22593735 - 22593866
Alignment:
Q  205 tatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgag 304  Q
    |||||||||||||||||||||||  || || |||||||||||||||||||||||| |||||||||||||||| | | | || ||||||| || |||||||    
T  22593735 tatttgtataaatagtagttttttctaagggaaaagggtcacaattcaatcatacaaaaaacttacactcaa-attatgcgcatggaagagagaaacgag 22593833  T
Q  305 ttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    | ||||||||||| ||||||| |||||||||||    
T  22593834 tcacaagttgcaatgtatgaacatgtgtaccaa 22593866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 34827768 - 34827636
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||| ||||||||||||||||||    ||||||||||||||||||||||||||| |||||||||||||||| | | || | ||||||| || ||||||    
T  34827768 ctatttatataaatagtagtttttccctaggaaaaagggtcacaattcaatcatacaaaaaacttacactcaa-attatctgcatggaagagagaaacga 34827670  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || |||||||| || ||||||| |||||||||||    
T  34827669 gtcacaagttgtaatgtatgaacatgtgtaccaa 34827636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 28567862 - 28567731
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||| ||||||||||||| |||  ||||||| ||||||||||| ||||||| |||||||||||||||| | | |||| ||||||| || ||| ||    
T  28567862 ctatttgtagaaatagtagttttccttcaggaaaaaaggtcacaattctatcatac-aaaaacttacactcaa-attatccgcatggaagagagaaatga 28567765  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| ||||||| |||||||||||    
T  28567764 gtcacaagttgcaatgtatgaacatgtgtaccaa 28567731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 23815137 - 23815003
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaa-gggtcacaattcaatcatactaaaaa-cttacactcaatactgtccgtatggaagcgacaaac 301  Q
    ||||||||||||||||||||||| | || ||||||| |||||||||||| ||||||| ||||| |||||||| || | | |||| ||||||| || ||||    
T  23815137 ctatttgtataaatagtagttttccctaaggaaaaaagggtcacaattctatcatacaaaaaaacttacactaaa-attatccgcatggaagagagaaac 23815039  T
Q  302 gagttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    |||| ||||||||||| ||||||| |||||||||||    
T  23815038 gagtcacaagttgcaatgtatgaacatgtgtaccaa 23815003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 10480544 - 10480411
Alignment:
Q  204 ctatttgtataaatagtagtttttc-ttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 302  Q
    ||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||||  ||||||||||||| | ||| |||| ||  ||| || ||||     
T  10480544 ctattagtataaatagtagtttttccttaggggaaaagggtcacaatccaatcatacacaaaacttacactcga-actatccgcattcaagagagaaaca 10480446  T
Q  303 agttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    |||  |||||||||| ||||||| |||||||||||    
T  10480445 agtcgcaagttgcaatgtatgaacatgtgtaccaa 10480411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 204 - 310
Target Start/End: Complemental strand, 21256611 - 21256506
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||||||||| | || ||||||  ||||||||||||||||||| |||||||||||||||| | | |||| ||||||| || ||||||    
T  21256611 ctatttgtataaatagtagttttccctaaggaaaagtggtcacaattcaatcatacaaaaaacttacactcaa-attatccgcatggaagagagaaacga 21256513  T
Q  304 gttacaa 310  Q
    || ||||    
T  21256512 gtcacaa 21256506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 337
Target Start/End: Original strand, 20524136 - 20524262
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttaca 309  Q
    ||||||||| ||||||||| |||| ||||   ||||||||||||||||||  ||||||||||||||| ||| |||| ||  ||| || |||||||| |||    
T  20524136 gtataaataatagtttttcataggaaaaacatgtcacaattcaatcatacagaaaacttacactcaa-actatccgcatttaagagaaaaacgagtcaca 20524234  T
Q  310 agttgcaaagtatgaatatgtgtaccaa 337  Q
    |||||||| |||||||| | ||||||||    
T  20524235 agttgcaatgtatgaatttttgtaccaa 20524262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 23803509 - 23803373
Alignment:
Q  204 ctatttgtataaatagtagtttttcttaggga---aaaagggtcacaattcaatcatactaaaaa-cttacactcaatactgtccgtatggaagcgacaa 299  Q
    ||||||||||||||||||||||||| ||   |   |||||||||||||||| ||||||| ||||| ||| ||||||| | | |||| ||||||| || ||    
T  23803509 ctatttgtataaatagtagtttttcctataaataaaaaagggtcacaattctatcatacaaaaaaacttgcactcaa-attatccgcatggaagagagaa 23803411  T
Q  300 acgagttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    |||||| ||||||||||| ||||||| |||||||||||    
T  23803410 acgagtaacaagttgcaatgtatgaacatgtgtaccaa 23803373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 367
Target Start/End: Original strand, 22635243 - 22635289
Alignment:
Q  321 atgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22635243 atgaatatgtgtaccaactttcattaagtctttacaaattcaataca 22635289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 25349421 - 25349286
Alignment:
Q  204 ctatttgtataaatagtagttttt---cttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaa 300  Q
    ||||| ||||||||||||||||||   ||||||||||| ||||||||||  ||||||||  ||||||||||||||| ||| |||| ||  ||| ||  ||    
T  25349421 ctattagtataaatagtagttttttttcttagggaaaacgggtcacaatcaaatcatacacaaaacttacactcaa-actatccgcattcaagagaggaa 25349323  T
Q  301 cgagttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    ||||| | ||||||||| ||||| |||||||||||||    
T  25349322 cgagtcataagttgcaatgtatggatatgtgtaccaa 25349286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 276
Target Start/End: Complemental strand, 23870663 - 23870591
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    ||||||||||||||||||||||||| ||   ||||  ||||||||||||||||||| ||||||||||||||||    
T  23870663 ctatttgtataaatagtagtttttcctaaaaaaaagtggtcacaattcaatcatacaaaaaacttacactcaa 23870591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 210 - 337
Target Start/End: Complemental strand, 21905109 - 21904983
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttaca 309  Q
    ||||||||| ||||||||| |||||||||  ||||||||  ||||||||| |||||||||||||||| ||| |||  ||  ||| ||  ||||||| |||    
T  21905109 gtataaataatagtttttcatagggaaaacaggtcacaaaccaatcatacaaaaaacttacactcaa-actatccacattcaagagaggaacgagtcaca 21905011  T
Q  310 agttgcaaagtatgaatatgtgtaccaa 337  Q
    |||| ||| ||||||| |||||||||||    
T  21905010 agttacaatgtatgaacatgtgtaccaa 21904983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 334
Target Start/End: Original strand, 22708162 - 22708291
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||| |||||||||||||||||| |  ||||||  |||||||||||||| |||| ||||||||||||| || | | |||| ||| ||| || ||||||    
T  22708162 ctatttctataaatagtagtttttcctcaggaaaagtggtcacaattcaattatacaaaaaacttacacttaa-attatccgcatgcaagagagaaacga 22708260  T
Q  304 gttacaagttgcaaagtatgaatatgtgtac 334  Q
     | |||| |||||| ||||||| ||||||||    
T  22708261 atcacaaattgcaatgtatgaacatgtgtac 22708291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 30052039 - 30051973
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    ||||||||||||| ||||| |||| |||| ||||||||||||||||||||  |||||||||||||||    
T  30052039 gtataaatagtagcttttcataggaaaaatgggtcacaattcaatcatacagaaaacttacactcaa 30051973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 30143083 - 30143017
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    ||||||||||||| ||||| |||| |||| ||||||||||||||||||||  |||||||||||||||    
T  30143083 gtataaatagtagcttttcataggaaaaatgggtcacaattcaatcatacagaaaacttacactcaa 30143017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 30090054 - 30089988
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    ||||||||||| | ||||| |||| |||| ||||||||||||||||||||  |||||||||||||||    
T  30090054 gtataaatagtcgcttttcataggaaaaacgggtcacaattcaatcatacagaaaacttacactcaa 30089988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 30126659 - 30126593
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    ||||||||||| | ||||| |||| |||| ||||||||||||||||||||  |||||||||||||||    
T  30126659 gtataaatagtcgcttttcataggaaaaacgggtcacaattcaatcatacagaaaacttacactcaa 30126593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 23995797 - 23995731
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    ||||||||||||||||||  |||| ||||   ||||||||||||||||||  |||||||||||||||    
T  23995797 gtataaatagtagttttttataggaaaaacatgtcacaattcaatcatacagaaaacttacactcaa 23995731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 337
Target Start/End: Complemental strand, 23829906 - 23829851
Alignment:
Q  282 tccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    |||| ||||||| || |||||||| ||||||||||| ||||||| |||||||||||    
T  23829906 tccgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaa 23829851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 20442213 - 20442279
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    ||||||||||||||||||| |||| |||    ||||||||||||||||||  |||||||||| ||||    
T  20442213 gtataaatagtagtttttcataggaaaagcatgtcacaattcaatcatacagaaaacttacaatcaa 20442279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 169; Significance: 2e-90; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 161 - 365
Target Start/End: Original strand, 22973 - 23177
Alignment:
Q  161 tttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatact 260  Q
    |||||||||||||||||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  22973 tttcgattttgaatcgaatagatatgattaggtagttataggattatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatact 23072  T
Q  261 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  23073 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaatt 23172  T
Q  361 caata 365  Q
    |||||    
T  23173 caata 23177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 161 - 365
Target Start/End: Original strand, 44149 - 44353
Alignment:
Q  161 tttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatact 260  Q
    |||||||||||||| ||| |||| ||||||||||||||||||  ||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  44149 tttcgattttgaattgaatagatatgattaggtagttataggattatctgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatact 44248  T
Q  261 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 360  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  44249 aaaaacttacactcaataatgtccgtatgaaagcgacaaacgagtcacaagttgcaaagtatgaatctgtgcaccaattttcattaagtctttacaaatt 44348  T
Q  361 caata 365  Q
    |||||    
T  44349 caata 44353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 167; Significance: 3e-89; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 161 - 390
Target Start/End: Original strand, 41281 - 41510
Alignment:
Q  161 tttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatact 260  Q
    |||||||||| ||||||| || |  ||||||||||||||||| |||||||||||||||||||||||||||||| ||||  |||||||||| |||||||||    
T  41281 tttcgattttaaatcgaacaggtacgattaggtagttataggactatttgtataaatagtagtttttcttaggaaaaacaggtcacaatttaatcatact 41380  T
Q  261 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41381 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaactttcattaagtctttacaaatt 41480  T
Q  361 caataca-atcttttaaacacttttgcaatt 390  Q
    ||||||| ||| |||||||||||||||||||    
T  41481 caatacagatc-tttaaacacttttgcaatt 41510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 158; Significance: 7e-84; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 172 - 377
Target Start/End: Complemental strand, 8253 - 8048
Alignment:
Q  172 aatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttaca 271  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  8253 aatcgaacagatatgattaggtagttataggactatttgtataaatagtagtttttcttagaaaaaacgggtcacaattcaatcatactaaaaacttaca 8154  T
Q  272 ctcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatct 371  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||| |||    
T  8153 ctcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatttgtgcaccaattttcagtaagtctttacaaattcaatacagtct 8054  T
Q  372 tttaaa 377  Q
    ||||||    
T  8053 tttaaa 8048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 172 - 377
Target Start/End: Complemental strand, 15383 - 15178
Alignment:
Q  172 aatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttaca 271  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  15383 aatcgaacagatatgattaggtagttataggactatttgtataaatagtagtttttcttagaaaaaacgggtcacaattcaatcatactaaaaacttaca 15284  T
Q  272 ctcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatct 371  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||| |||    
T  15283 ctcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatttgtgcaccaattttcagtaagtctttacaaattcaatacagtct 15184  T
Q  372 tttaaa 377  Q
    ||||||    
T  15183 tttaaa 15178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 155; Significance: 4e-82; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 189 - 383
Target Start/End: Complemental strand, 142374 - 142180
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  142374 taggtagttataggtctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatattcaaaacttacactcaatactgtccgtat 142275  T
Q  289 ggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttt 383  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  142274 ggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaactttcattaagtctttacaaattcaatacatttctttaaacacttt 142180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 189 - 390
Target Start/End: Complemental strand, 118524 - 118323
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  118524 taggtagttataggtctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatacgcaaaacttacactcaatactgtccgtat 118425  T
Q  289 ggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaa 388  Q
    |||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |  ||||||||| |||||||    
T  118424 ggaatcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaactttcattaagtctttacaaattcaatacatttctttaaacacctttgcaa 118325  T
Q  389 tt 390  Q
    ||    
T  118324 tt 118323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 2e-81; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 185 - 390
Target Start/End: Complemental strand, 20506478 - 20506273
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  20506478 tgattaggtagttataggtctatttgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatactcaaaacttacactcaatactgtcc 20506379  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacactttt 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| |  ||||||||  |||    
T  20506378 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgcaccaactttcattaagtctttgcaatttcaatacatttctttaaacatcttt 20506279  T
Q  385 gcaatt 390  Q
    ||||||    
T  20506278 gcaatt 20506273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 185 - 390
Target Start/End: Complemental strand, 21982772 - 21982567
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  21982772 tgattaggtagttataggactatttatataaatagtagtttttcttaggaaaaataggtcacaattcaatcatactaaaaacttacactcaatactgtcc 21982673  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacactttt 384  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| |  ||||||||  |||    
T  21982672 gtatggaagcgacaaacgagtcacaagttgcagagtatgaatatgtgcaccaattttcattaagtctttacaaattcaatacatttctttaaacatcttt 21982573  T
Q  385 gcaatt 390  Q
    ||||||    
T  21982572 gcaatt 21982567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 185 - 367
Target Start/End: Original strand, 21530278 - 21530460
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  21530278 tgattaggcagttataggtctatttgtataaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactatcc 21530377  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  21530378 gtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaataca 21530460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 185 - 367
Target Start/End: Complemental strand, 26274256 - 26274074
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26274256 tgattaggcagttataggtctatttgtataaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtcc 26274157  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  26274156 gtatggaagtgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaataca 26274074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 185 - 332
Target Start/End: Original strand, 21504611 - 21504758
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21504611 tgattaggcagttataggtctatttgtataaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtcc 21504710  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgt 332  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21504711 gtatggaagcgacaaacgagtaacaagttgcaaagtatgaatatgtgt 21504758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 20024593 - 20024462
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||| | | |||| ||||||| || ||||||    
T  20024593 ctatctgtataaatagtagtttctcttaaggaaaaagggtcacaattcaatcatac-aaaaacttacactcaa-attatccgcatggaagagagaaacga 20024496  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| |||||||||||||||||||    
T  20024495 gtcacaagttgcaatgtatgaatatgtgtaccaa 20024462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 337
Target Start/End: Original strand, 40932874 - 40933004
Alignment:
Q  206 atttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagt 305  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| ||||||| ||||||| |||||||| | | || | ||||||| || ||||||||    
T  40932874 atttgtataaatagtagttttccctagggaaaaagggtcacaattctatcatacaaaaaactaacactcaa-attatctgcatggaagagataaacgagt 40932972  T
Q  306 tacaagttgcaaagtatgaatatgtgtaccaa 337  Q
     ||||||||||| |||||||||||||||||||    
T  40932973 cacaagttgcaatgtatgaatatgtgtaccaa 40933004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 18156137 - 18156269
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||||| ||||| || ||||||| ||||||||| |||||||||  ||||||||||||||| | | |||| ||||||| || ||||||    
T  18156137 ctatttgtataaatagtagcttttcctaaggaaaaaaggtcacaatccaatcatacacaaaacttacactcaa-attatccgcatggaagagagaaacga 18156235  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| |||||||| ||||||||||    
T  18156236 gtcacaagttgcaatgtatgaatctgtgtaccaa 18156269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 293 - 367
Target Start/End: Original strand, 21507876 - 21507950
Alignment:
Q  293 gcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  21507876 gcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaataca 21507950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 215 - 337
Target Start/End: Original strand, 10624309 - 10624430
Alignment:
Q  215 aatagtagtttttcttagggaaaaa-gggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagtt 313  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||| |||||||||||||||| | | |||| ||||||| || ||| |||| |||||||    
T  10624309 aatagtagtttttcctagggaaaaaagggtcacaattctatcatac-aaaaacttacactcaa-attatccgcatggaagagataaatgagtcacaagtt 10624406  T
Q  314 gcaaagtatgaatatgtgtaccaa 337  Q
    |||| ||||||| |||||||||||    
T  10624407 gcaatgtatgaacatgtgtaccaa 10624430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 337
Target Start/End: Original strand, 16832141 - 16832234
Alignment:
Q  243 tcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    ||||||| |||||||||  ||||||||||||||| | | |||| || |||| || |||||||| ||||||||||| ||||||| |||||||||||    
T  16832141 tcacaatccaatcatacacaaaacttacactcaa-attatccgcattgaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaa 16832234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 19212377 - 19212441
Alignment:
Q  212 ataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    |||||||  |||||||| |||| ||||  ||||||||||||||||||  ||||||||||||||||    
T  19212377 ataaatatcagtttttcataggaaaaacaggtcacaattcaatcatataaaaaacttacactcaa 19212441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 153; Significance: 7e-81; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 161 - 365
Target Start/End: Complemental strand, 43304 - 43100
Alignment:
Q  161 tttcgattttgaatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatact 260  Q
    |||||||||||||||||| |||| ||||||||||||||||||  ||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  43304 tttcgattttgaatcgaatagatatgattaggtagttataggattatctgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatact 43205  T
Q  261 aaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaatt 360  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  43204 aaacacttacactcaatactgtccgtatggaagcgacaaacgagtcataagttgcaaagtatgaatctgtgcaccaattttcattaagtctttacaaatt 43105  T
Q  361 caata 365  Q
    |||||    
T  43104 caata 43100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 151; Significance: 1e-79; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 185 - 367
Target Start/End: Complemental strand, 25250 - 25068
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25250 tgattaggcagttataggtctatttgtataaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtcc 25151  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  25150 gtatggaagcgacaaacgagtaacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaataca 25068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 185 - 367
Target Start/End: Complemental strand, 28748 - 28566
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28748 tgattaggcagttataggtctatttgtataaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtcc 28649  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  28648 gtatggaagcgacaaacgagtaacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaataca 28566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 185 - 367
Target Start/End: Complemental strand, 115507 - 115325
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  115507 tgattaggcagttataggtctatttgtataaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtcc 115408  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||||||||| ||| || |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  115407 gtatggaagcgacaaacaagtcaccagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaataca 115325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 172 - 367
Target Start/End: Complemental strand, 130071 - 129877
Alignment:
Q  172 aatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttaca 271  Q
    ||||||| || | |||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  130071 aatcgaatagctatgattaggcagttataggtctatttgtataaatagaagtttttcttagg-aaaaacagtcacaattcaatcatactaaaaacttaca 129973  T
Q  272 ctcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  129972 ctcaatactgtccgtatggaagcgacaaacaagtcaccagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaataca 129877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 189 - 390
Target Start/End: Original strand, 390056 - 390257
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||||| |||||| |||||||| |||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  390056 taggtagttataggtctatttctataaatattagtttttcttaggaaaaacgggtcacaattcaatcatactcaaaacttacactcaatactgtccgtat 390155  T
Q  289 ggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaa 388  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| ||||| ||| ||||||||| |  ||||||||  |||||||    
T  390156 ggaagagacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaaatctttgcaatttcaatacatttctttaaacatctttgcaa 390255  T
Q  389 tt 390  Q
    ||    
T  390256 tt 390257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 150; Significance: 4e-79; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 189 - 390
Target Start/End: Complemental strand, 8916 - 8715
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||| | |||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8916 taggtagttataagtctatttgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 8817  T
Q  289 ggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaa 388  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |  ||||||||  |||||||    
T  8816 ggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaatacatttctttaaacatctttgcaa 8717  T
Q  389 tt 390  Q
    ||    
T  8716 tt 8715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 150; Significance: 4e-79; HSPs: 6)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 185 - 390
Target Start/End: Original strand, 62115 - 62320
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  62115 tgattgggtagttataggtctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatattgtcc 62214  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacactttt 384  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |  ||||||||  |||    
T  62215 gtatggaagcgacaaacgaatcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaatacatttctttaaacatcttt 62314  T
Q  385 gcaatt 390  Q
    ||||||    
T  62315 gcaatt 62320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 185 - 390
Target Start/End: Original strand, 84976 - 85181
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  84976 tgattgggtagttataggtctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaagaacttacactcaatactgtcc 85075  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacactttt 384  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||| |  ||||||||  |||    
T  85076 gtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaatttccattaagtctttacaaattcaatacatttctttaaacatcttt 85175  T
Q  385 gcaatt 390  Q
    ||||||    
T  85176 gcaatt 85181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 194 - 390
Target Start/End: Original strand, 71302 - 71498
Alignment:
Q  194 agttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaag 293  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  71302 agttataggtctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatattgtccgtatggaag 71401  T
Q  294 cgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatt 390  Q
    |||||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |  ||||||||  |||||||||    
T  71402 cgacaaacgaatcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaatacatttctttaaacatctttgcaatt 71498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 204 - 390
Target Start/End: Complemental strand, 6799 - 6613
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||||||| |||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6799 ctatttgtataaatagtagtttttcttaggaaaaagggatcacaattcaatcatacaaaaaacttacactcaatactgtccgtatggaagcgacaaacga 6700  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatt 390  Q
    || ||||||||||||||||||| ||||| ||||| ||||||||||||| ||||| ||||||||| |  ||||||||  |||||||||    
T  6699 gtcacaagttgcaaagtatgaacatgtgcaccaattttcattaagtctatacaatttcaatacatttctttaaacatctttgcaatt 6613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 204 - 390
Target Start/End: Original strand, 22608 - 22794
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||| ||||||||||||||||||||| |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22608 ctatttgtgtaaatagtagtttttcttaggaaaaacgggtcataattcgatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 22707  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatt 390  Q
    || ||||||||||||||||||| ||||| ||||| ||||||||||||| |  || ||||||||| |  ||||||||  |||||||||    
T  22708 gtcacaagttgcaaagtatgaacatgtgcaccaattttcattaagtctatttaatttcaatacatttctttaaacatctttgcaatt 22794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 367
Target Start/End: Original strand, 116476 - 116558
Alignment:
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||||  ||||||| ||||||||||| |||||||||||||||||||||| |||| ||||  | ||| |||||||||    
T  116476 gtatggaagcgatgaacgagtcacaagttgcaatgtatgaatatgtgtaccaacttacattcagtcaatgcaatttcaataca 116558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 144; Significance: 2e-75; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 172 - 390
Target Start/End: Complemental strand, 5954 - 5735
Alignment:
Q  172 aatcgaaaagatgtgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttaca 271  Q
    ||||||| |||| |||| ||  ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5954 aatcgaacagatatgatcagacagttataggactatttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttaca 5855  T
Q  272 ctcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatct 371  Q
    || |||  |||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| | |    
T  5854 cttaattttgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatctgtgcaccaattttcattaagtctttacaaattcaatacagttt 5755  T
Q  372 ttt-aaacacttttgcaatt 390  Q
    ||| |||||| |||||||||    
T  5754 tttaaaacacctttgcaatt 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 143; Significance: 6e-75; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 185 - 367
Target Start/End: Original strand, 25051 - 25233
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25051 tgattaggtagttataggtctatttgtataaatagtagtttttcttaggaaaaatgggtcacaattcaatcatactaaaaacttacactcaatactgtcc 25150  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| || ||||| ||| ||||||||||||||| |||||||||    
T  25151 gtatggatgcgacaaacgagtcacaagttgcaaagtatgaatatatgcaccaatttttattaagtctttacaagttcaataca 25233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 143; Significance: 6e-75; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 185 - 367
Target Start/End: Complemental strand, 18660 - 18478
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||| ||||||||| ||||||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18660 tgattaggcagttataggtctatttgtagaaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtcc 18561  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  18560 gtatggaagcgacaaacgagtcacaagttacaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaataca 18478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 185 - 367
Target Start/End: Complemental strand, 28191 - 28009
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||| ||||||||| ||||||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28191 tgattaggcagttataggtctatttgtagaaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtcc 28092  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  28091 gtatggaagcgacaaacgagtcacaagttacaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaataca 28009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 142; Significance: 3e-74; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 189 - 390
Target Start/End: Complemental strand, 151558 - 151357
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  151558 taggtagttataggcctatttgtataaatagtagtttttcttaggaaaaaggggtcacaattcaatcatactaaaaacttacactcaatactatccgtat 151459  T
Q  289 ggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaa 388  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||||| ||| ||||||||| |  ||||||||  |||||||    
T  151458 ggaagcgacaaacgagtcacaagttgcaaagtatgaacatgtgcaccaattttcattaagtctttgcaatttcaatacatttctttaaacatctttgcaa 151359  T
Q  389 tt 390  Q
    ||    
T  151358 tt 151357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 263 - 390
Target Start/End: Complemental strand, 161829 - 161702
Alignment:
Q  263 aaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattca 362  Q
    ||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||| ||||| ||||| ||||||||||||||| ||| ||||    
T  161829 aaacttacactcaatactgtctgtatggaagcgacaaatgagtcacaagttgcaaagtatgaacatgtgcaccaattttcattaagtctttgcaatttca 161730  T
Q  363 atacaatcttttaaacacttttgcaatt 390  Q
    ||||| |  ||||||||  |||||||||    
T  161729 atacatttctttaaacatctttgcaatt 161702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 162117 - 162035
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttaca 271  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||| |||||    
T  162117 taggtagttataggcctatttgtataaatagtagtttttcttaggaaaaaggggtcacaattaaatcatactaaaaaattaca 162035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 139; Significance: 2e-72; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 185 - 367
Target Start/End: Original strand, 2402 - 2584
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||| | |||| |||||||||||||||||||| |||||||||| |||||||||||||    
T  2402 tgattaggtagttataggattatttgtataaatagaagtttttcttaagaaaaacgggtcacaattcaatcataccaaaaacttaccctcaatactgtcc 2501  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  2502 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttataaattcaataca 2584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 187 - 367
Target Start/End: Complemental strand, 44420 - 44240
Alignment:
Q  187 attaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgt 286  Q
    |||||| |||||||||  ||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  44420 attaggcagttataggtgtatttgtataaataggagtttttcttaggaaaaacaggtcacaattcaatcatacaaaaaacttacactcaatactgtccgt 44321  T
Q  287 atggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  44320 atggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaataca 44240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 135; Significance: 4e-70; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 185 - 367
Target Start/End: Complemental strand, 26938 - 26756
Alignment:
Q  185 tgattaggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtcc 284  Q
    |||||||| ||||||||| ||||||||||||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26938 tgattaggcagttataggtctatttgtataaataggggtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtcc 26839  T
Q  285 gtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||  ||||||||||| | ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  26838 gtatggttgcgacaaacgattcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaataca 26756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 189 - 390
Target Start/End: Original strand, 15689 - 15890
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  15689 taggtagttataggtctatttctataaatagtagtttttcttaggaaaaacgggtcacaaatcaatcatactcaaaacttacactcaatactatccgtat 15788  T
Q  289 ggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaa 388  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| ||| ||||||||| |  ||||||||  |||||||    
T  15789 ggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattttcattaagtctttgcaatttcaatacatttctttaaacatctttgcaa 15888  T
Q  389 tt 390  Q
    ||    
T  15889 tt 15890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 130; Significance: 4e-67; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 213 - 390
Target Start/End: Original strand, 63772 - 63949
Alignment:
Q  213 taaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagt 312  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  63772 taaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaatttacacttaatactgtccgtatggaagcgacaaacgagtcacaagt 63871  T
Q  313 tgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatt 390  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |  ||||||||  |||||||||    
T  63872 tgcaaagtatgaatatgtgcaccaattttcattaagtctttacaaattcaatacatttctttaaacatctttgcaatt 63949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 297 - 488
Target Start/End: Complemental strand, 11322 - 11131
Alignment:
Q  297 caaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaattcaaatc 396  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  11322 caaacgagtcacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgtaattcaagtc 11223  T
Q  397 ttgtttgactaagtctttttaaagtacttcttttcattactatcatttacaacatttcgattgaattcaacacggattggattcgattcttt 488  Q
    |||||| |||||||||||| |||||||||| ||| | |   || |||||||  |||||||||| ||||||| ||||||||||||||||||||    
T  11222 ttgttttactaagtcttttcaaagtacttccttttactgtcattatttacagaatttcgattggattcaacccggattggattcgattcttt 11131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 204 - 350
Target Start/End: Original strand, 30579 - 30725
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30579 ctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 30678  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtc 350  Q
    || ||||||||||||||||||| ||||| ||||| ||||||||||||    
T  30679 gtcacaagttgcaaagtatgaacatgtgcaccaattttcattaagtc 30725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 204 - 390
Target Start/End: Complemental strand, 1362 - 1176
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1362 ctatttgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatactaaaaacttacactaaatactgtccgtatggaagcgacaaacga 1263  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatt 390  Q
    || ||||||||||||||||||| ||||| ||||| ||||||||||||  | ||| ||||||||| |  ||||||||  |||||||||    
T  1262 gtcacaagttgcaaagtatgaacatgtgcaccaattttcattaagtcaatgcaatttcaatacatttctttaaacatctttgcaatt 1176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 204 - 390
Target Start/End: Complemental strand, 7790 - 7604
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7790 ctatttgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatactaaaaacttacactaaatactgtccgtatggaagcgacaaacga 7691  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaatacaatcttttaaacacttttgcaatt 390  Q
    || ||||||||||||||||||| ||||| ||||| ||||||||||||  | ||| ||||||||| |  ||||||||  |||||||||    
T  7690 gtcacaagttgcaaagtatgaacatgtgcaccaattttcattaagtcaatgcaatttcaatacatttctttaaacatctttgcaatt 7604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 204 - 350
Target Start/End: Original strand, 32065 - 32211
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32065 ctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatattgtccgtatggaagcgacaaacga 32164  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtc 350  Q
    || | ||||||||||||||||| ||||| ||||| ||||||||||||    
T  32165 gtcaaaagttgcaaagtatgaacatgtgcaccaattttcattaagtc 32211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 204 - 345
Target Start/End: Complemental strand, 45376 - 45235
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||    
T  45376 ctatttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacgctcaatattgtccgtatggaagcggcaaacga 45277  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    || ||||||||||| ||||||||||||| |||||||| ||||    
T  45276 gtcacaagttgcaatgtatgaatatgtgcaccaacttacatt 45235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 106; Significance: 8e-53; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 189 - 318
Target Start/End: Original strand, 1706 - 1835
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  1706 taggtagttataggcctatttgtataaatagtagtttttcttaggaaaaatgggtcacaattcaatcatactaaaaacttatgctcaatactgtccgtat 1805  T
Q  289 ggaagcgacaaacgagttacaagttgcaaa 318  Q
    ||||||||||||||||| ||||||||||||    
T  1806 ggaagcgacaaacgagtcacaagttgcaaa 1835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 207 - 345
Target Start/End: Original strand, 11291 - 11429
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtt 306  Q
    ||||||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||     
T  11291 tttgtataaatagtagttttctttaggaaaacagggtcacaattcaatcatactaaaaacttacgctcaatactgtccgtatggaagcgacaaatgagtc 11390  T
Q  307 acaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    |||||||||||||||||||  |||||||||| |||||||    
T  11391 acaagttgcaaagtatgaacctgtgtaccaaatttcatt 11429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 207 - 345
Target Start/End: Complemental strand, 20110 - 19972
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtt 306  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| ||||     
T  20110 tttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacgctcaatattgtccgtatggaagctacaaatgagtc 20011  T
Q  307 acaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    ||||||||||| |||||||||  || |||||||| ||||    
T  20010 acaagttgcaatgtatgaatagatgcaccaacttacatt 19972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 204 - 345
Target Start/End: Complemental strand, 17136 - 16995
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||| | ||||||| ||| ||||||||||||||||||||    
T  17136 ctatttgtataaagagtagtttttcttagaaaaaaagggtcacaattcaatcatactaaaaacttgcgctcaatattgttcgtatggaagcgacaaacga 17037  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    || ||||||||||| ||||||| ||||| |||||||| ||||    
T  17036 gtcacaagttgcaatgtatgaacatgtgcaccaacttacatt 16995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 5542 - 5607
Alignment:
Q  211 tataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    |||| ||||||||||||| || | |||| |||||||||||||||||||   |||||||||||||||    
T  5542 tatagatagtagtttttcatatgaaaaacgggtcacaattcaatcatatagaaaacttacactcaa 5607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 207 - 350
Target Start/End: Complemental strand, 33477 - 33335
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtt 306  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||| ||||||||     
T  33477 tttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacgctcaa-actatccatatggaagcgataaacgagtc 33379  T
Q  307 acaagttgcaaagtatgaatatgtgtaccaactttcattaagtc 350  Q
    |||||||| || |||||||||||||||||||||| |||| ||||    
T  33378 acaagttggaatgtatgaatatgtgtaccaacttacattcagtc 33335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 91; Significance: 7e-44; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 204 - 350
Target Start/End: Complemental strand, 68250 - 68105
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||| ||||||    
T  68250 ctatttgtataaatagtagtttttcttaggaaaaaagagtcacaattcaatcatactaaaaacttacgctcaa-actatccttatggaagcgataaacga 68152  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtc 350  Q
    || ||||||||||| |||||||| ||||||| ||||| |||| ||||    
T  68151 gtcacaagttgcaatgtatgaatctgtgtactaacttacattcagtc 68105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 204 - 334
Target Start/End: Complemental strand, 76355 - 76226
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||| ||||||    
T  76355 ctatttgtataaatagtagtttttcttaggaaaaaagagtcacaattcaatcatactaaaaacttacgctcaa-actatccttatggaagcgataaacga 76257  T
Q  304 gttacaagttgcaaagtatgaatatgtgtac 334  Q
    || ||||||||||| |||||||| |||||||    
T  76256 gtcacaagttgcaatgtatgaatctgtgtac 76226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 205 - 350
Target Start/End: Original strand, 129152 - 129296
Alignment:
Q  205 tatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgag 304  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||| ||| ||| ||||||||||| |||||||    
T  129152 tatttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaatttacgctcaa-actatccttatggaagcgataaacgag 129250  T
Q  305 ttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtc 350  Q
    | ||||||||||| |||||||| |||||| |||||| |||| ||||    
T  129251 tcacaagttgcaatgtatgaatctgtgtaacaacttacattcagtc 129296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 204 - 345
Target Start/End: Original strand, 107406 - 107547
Alignment:
Q  204 ctatttgtataaatagtagtttt-tcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 302  Q
    |||||||||||||||||| |||| ||||||| ||||| |||||||||||||||||||||||||||||| ||| | ||| ||| ||||||||||| |||||    
T  107406 ctatttgtataaatagtatttttttcttaggaaaaaaaggtcacaattcaatcatactaaaaacttacgctc-agactatccttatggaagcgataaacg 107504  T
Q  303 agttacaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    ||| ||||||||||| |||||||| ||||||||||||| ||||    
T  107505 agtcacaagttgcaatgtatgaatctgtgtaccaacttacatt 107547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 204 - 340
Target Start/End: Original strand, 200111 - 200245
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||| | | ||| ||||||||||| ||| ||    
T  200111 ctatttgtataaatagttgtttttcttaggaaaaaagggtcacaattcaatcatac-aaaaacttacactcaa-attatccttatggaagcgagaaatga 200208  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactt 340  Q
    || ||||||||||| |||||||| |||||||||||||    
T  200209 gtcacaagttgcaatgtatgaatctgtgtaccaactt 200245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 1547 - 1415
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||||| | | |||| ||||||| || ||||||    
T  1547 ctatttgtataaatagtagtttttcctaaggaaaaagggtcacaagtcaatcatacaaaaaacttacactcaa-attatccgcatggaagagagaaacga 1449  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| ||||||| |||||||||||    
T  1448 gtcacaagttgcaatgtatgaacatgtgtaccaa 1415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 76; Significance: 6e-35; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 29097 - 29207
Alignment:
Q  189 taggtagttatagggctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtat 288  Q
    |||||||||||| | |||| ||||||||||||||||||||||||| ||||  |||||||||||||||| ||| |||||||||||||||||||||||||||    
T  29097 taggtagttatatgtctatctgtataaatagtagtttttcttaggaaaaagaggtcacaattcaatca-actcaaaacttacactcaatactgtccgtat 29195  T
Q  289 ggaagcgacaaa 300  Q
    ||||||||||||    
T  29196 ggaagcgacaaa 29207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 32201 - 32271
Alignment:
Q  297 caaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtctttacaaattcaataca 367  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||    
T  32201 caaacgagtcacaagttgcaaagtatgaacatgtgtaccaaatttcattaagtctttacaatttcaataca 32271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 102146 - 102015
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||| | | |||| ||||||| || ||||||    
T  102146 ctatttgtataaataatagtttctcttaaggaaaaagggtcacaattcaatcatac-aaaaacttacactcaa-attatccgcatggaagagagaaacga 102049  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || | ||||||||| |||||||||||||||||||    
T  102048 gtcaaaagttgcaatgtatgaatatgtgtaccaa 102015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 3842 - 3711
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||| |||||| ||||| | ||||||||||||||||||||||||| |||||||||||||||| | | |||| ||||||| || ||||||    
T  3842 ctatttgtataaatattagtttctcttaagtaaaaagggtcacaattcaatcatac-aaaaacttacactcaa-attatccgcatggaagagagaaacga 3745  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || | ||||||||| |||||||||||||||||||    
T  3744 gtcaaaagttgcaatgtatgaatatgtgtaccaa 3711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 337
Target Start/End: Complemental strand, 14282 - 14155
Alignment:
Q  208 ttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtta 307  Q
    ||||||||||||||||||| | || ||||||||||||||||||||||||||| |||||||||||||||| | | |||| ||||||| || |||||||| |    
T  14282 ttgtataaatagtagttttccctaaggaaaaagggtcacaattcaatcatac-aaaaacttacactcaa-attatccgcatggaagagagaaacgagtca 14185  T
Q  308 caagttgcaaagtatgaatatgtgtaccaa 337  Q
    |||||||||| ||||||| |||||||||||    
T  14184 caagttgcaatgtatgaacatgtgtaccaa 14155  T

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Target: scaffold0100 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 8974 - 9105
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||||||||||| |||| | | |||| ||||||| || |||| |    
T  8974 ctatttgtataaatagtagtttctcttaaggaaaaagagtcacaattcaatcatac-aaaaacttacattcaa-attatccgcatggaagagagaaacaa 9071  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| |||||||||||||||||||    
T  9072 gtcacaagttgcaatgtatgaatatgtgtaccaa 9105  T

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Target: scaffold0063 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 204 - 350
Target Start/End: Original strand, 70628 - 70773
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||||||||| | ||||||||| || ||||||||||||||||| ||| |||||||||||| | | |||| ||||||| || ||||||    
T  70628 ctatttgtataaatagtagttttccatagggaaaacggatcacaattcaatcatacaaaatacttacactcaa-attatccgcatggaagagagaaacga 70726  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaactttcattaagtc 350  Q
    || ||||||||||| ||||||| |||| |||||| || |||| ||||    
T  70727 gtcacaagttgcaatgtatgaacatgtttaccaatttacattcagtc 70773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 206 - 337
Target Start/End: Complemental strand, 250222 - 250092
Alignment:
Q  206 atttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagt 305  Q
    |||||||||||||||||||||||  | ||||||  ||||||||| |||||||||  ||||||||||||||| | | ||| ||||||||||| ||||||||    
T  250222 atttgtataaatagtagtttttcccaaggaaaagtggtcacaatccaatcatacacaaaacttacactcaa-attatccatatggaagcgagaaacgagt 250124  T
Q  306 tacaagttgcaaagtatgaatatgtgtaccaa 337  Q
     ||||||||||| |||||||| ||||||||||    
T  250123 cacaagttgcaatgtatgaatttgtgtaccaa 250092  T

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Target: scaffold0480 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 204 - 331
Target Start/End: Original strand, 3685 - 3811
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||||||||| |||||||||| | ||||||||| |||||||||||| ||||||| |||||||||||||||| | | |||| ||||||| || ||||||    
T  3685 ctatttgtataagtagtagttttccctagggaaaatgggtcacaattctatcatacaaaaaacttacactcaa-attatccgcatggaagagagaaacga 3783  T
Q  304 gttacaagttgcaaagtatgaatatgtg 331  Q
    || |||||||| || ||||||| |||||    
T  3784 gtcacaagttgaaatgtatgaacatgtg 3811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 12314 - 12446
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    |||||| |||||||||||||||||| |  ||||||  |||||||| |||||||||| |||||||||||||||| | | |||| ||||||| || |||| |    
T  12314 ctatttatataaatagtagtttttccttaggaaaagaggtcacaaatcaatcatacaaaaaacttacactcaa-attatccgcatggaagagagaaacaa 12412  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| ||||||| |||||||||||    
T  12413 gtcacaagttgcaatgtatgaacatgtgtaccaa 12446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 204 - 345
Target Start/End: Original strand, 7411 - 7552
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagg-gtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 302  Q
    ||||||||||||||| ||| | | | |||||||||| | |||||||||||||||||| |||||| ||||||||| | | |||| ||||||| || |||||    
T  7411 ctatttgtataaataatagctctccctagggaaaaaagagtcacaattcaatcatacaaaaaacatacactcaa-attatccgcatggaagagagaaacg 7509  T
Q  303 agttacaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    ||| ||||||||||| ||||||| ||||||| |||||| ||||    
T  7510 agtcacaagttgcaatgtatgaacatgtgtatcaacttacatt 7552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 337
Target Start/End: Complemental strand, 8917 - 8791
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttaca 309  Q
    ||||||||||||||||| | || |||||| |||||||||| |||||||||  ||||||||||||||| ||| |||  ||  ||| || |||||||| |||    
T  8917 gtataaatagtagttttccataaggaaaacgggtcacaatccaatcatacacaaaacttacactcaa-actatccacattcaagagagaaacgagtcaca 8819  T
Q  310 agttgcaaagtatgaatatgtgtaccaa 337  Q
    |||| ||| ||||||| |||||||||||    
T  8818 agttacaatgtatgaacatgtgtaccaa 8791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 759 - 693
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||| ||||||||||||||||    
T  759 gtataaatagtagtttttcatagggaaaacaggtcacaattcagtcatacaaaaaacttacactcaa 693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 204 - 324
Target Start/End: Original strand, 7419 - 7536
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||||||||||||||| |||  ||||| |||| ||||||| ||||||||||||||  ||||||||||||||| | | |||| ||||||| || ||||||    
T  7419 ctatttgtataaatagttgttcctcttaaggaataagggtcgcaattcaatcatac--aaaacttacactcaa-attatccgcatggaagagataaacga 7515  T
Q  304 gttacaagttgcaaagtatga 324  Q
    || ||| ||||||| ||||||    
T  7516 gtcacatgttgcaatgtatga 7536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 210 - 273
Target Start/End: Complemental strand, 25888 - 25825
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacact 273  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||  ||||||||||||    
T  25888 gtataaatagtagtttttcataggaaaaacgggtcacaattcaatcatacagaaaacttacact 25825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1496 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold1496
Description:

Target: scaffold1496; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 1396 - 1462
Alignment:
Q  210 gtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    ||||||||||||||||||| || | |||| ||||||||||||||||||||  |||||||||||||||    
T  1396 gtataaatagtagtttttcataagaaaaacgggtcacaattcaatcatacggaaaacttacactcaa 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 205 - 345
Target Start/End: Original strand, 36315 - 36454
Alignment:
Q  205 tatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgag 304  Q
    |||||| |||||||||||||||   | |||||||||||  ||||| |||| |||| ||| |||| ||||| | | | | || ||||||| || |||||||    
T  36315 tatttgcataaatagtagttttcgctggggaaaaagggctacaatccaataatacaaaatactttcactcta-attattcgcatggaagagagaaacgag 36413  T
Q  305 ttacaagttgcaaagtatgaatatgtgtaccaactttcatt 345  Q
    | ||||||||||| ||||||| |||||||||||||| ||||    
T  36414 tcacaagttgcaatgtatgaacatgtgtaccaacttacatt 36454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 1289 - 1421
Alignment:
Q  204 ctatttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 303  Q
    ||||| ||| |||||||||||| ||| | || |||  ||| ||||| |||||||||  ||||||||||||||| | | | || ||||||| || ||||||    
T  1289 ctattagtaaaaatagtagtttctctcaagggaaagtggttacaatccaatcatacacaaaacttacactcaa-attattcgcatggaagagagaaacga 1387  T
Q  304 gttacaagttgcaaagtatgaatatgtgtaccaa 337  Q
    || ||||||||||| ||||||  |||||||||||    
T  1388 gtcacaagttgcaatgtatgatcatgtgtaccaa 1421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 207 - 276
Target Start/End: Complemental strand, 31362 - 31293
Alignment:
Q  207 tttgtataaatagtagtttttcttagggaaaaagggtcacaattcaatcatactaaaaacttacactcaa 276  Q
    ||||||||||||||||||||||||||| ||||   |||| | |||||||||||  |||||| ||||||||    
T  31362 tttgtataaatagtagtttttcttaggaaaaacatgtcagagttcaatcatacagaaaactaacactcaa 31293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 377
Target Start/End: Original strand, 11669 - 11703
Alignment:
Q  343 attaagtctttacaaattcaatacaatcttttaaa 377  Q
    ||||||||||||||||||||||||| |||||||||    
T  11669 attaagtctttacaaattcaatacagtcttttaaa 11703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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