View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10525_low_14 (Length: 249)

Name: NF10525_low_14
Description: NF10525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10525_low_14
NF10525_low_14
[»] chr1 (55 HSPs)
chr1 (2-227)||(15449192-15449417)
chr1 (160-227)||(15443752-15443819)
chr1 (25-82)||(47989516-47989573)
chr1 (26-82)||(31694694-31694750)
chr1 (31-90)||(6332681-6332740)
chr1 (25-90)||(6612154-6612220)
chr1 (25-90)||(44482240-44482306)
chr1 (49-90)||(14359529-14359570)
chr1 (42-90)||(22515887-22515936)
chr1 (42-90)||(22881616-22881665)
chr1 (25-82)||(28273071-28273128)
chr1 (41-90)||(24577185-24577235)
chr1 (25-90)||(25361896-25361962)
chr1 (25-90)||(32461447-32461512)
chr1 (42-90)||(18337339-18337388)
chr1 (42-90)||(41877470-41877519)
chr1 (42-90)||(46348383-46348432)
chr1 (25-81)||(5376483-5376539)
chr1 (26-82)||(5944302-5944358)
chr1 (41-81)||(25272502-25272542)
chr1 (43-90)||(40258934-40258982)
chr1 (42-82)||(51410044-51410084)
chr1 (36-90)||(1486703-1486758)
chr1 (43-82)||(1815276-1815315)
chr1 (41-76)||(2218264-2218299)
chr1 (41-90)||(113309-113359)
chr1 (41-90)||(1704991-1705041)
chr1 (25-90)||(9629883-9629949)
chr1 (37-82)||(28663627-28663672)
chr1 (25-82)||(30173745-30173802)
chr1 (42-90)||(38078661-38078710)
chr1 (42-90)||(42359449-42359498)
chr1 (23-66)||(17778581-17778625)
chr1 (47-90)||(31015053-31015097)
chr1 (29-81)||(34371733-34371785)
chr1 (47-90)||(48450592-48450636)
chr1 (32-90)||(18556446-18556505)
chr1 (25-90)||(40917761-40917825)
chr1 (25-90)||(9828054-9828120)
chr1 (44-82)||(21378597-21378635)
chr1 (33-90)||(27471557-27471615)
chr1 (36-82)||(35919270-35919316)
chr1 (42-90)||(5927340-5927389)
chr1 (25-82)||(6427483-6427540)
chr1 (42-90)||(9103650-9103698)
chr1 (42-90)||(14332642-14332691)
chr1 (42-75)||(19058856-19058889)
chr1 (42-90)||(31672895-31672944)
chr1 (50-82)||(13011223-13011255)
chr1 (43-90)||(18190109-18190157)
chr1 (46-82)||(18471319-18471355)
chr1 (42-82)||(21620974-21621014)
chr1 (42-74)||(24334705-24334737)
chr1 (25-81)||(25934636-25934692)
chr1 (43-90)||(36878471-36878519)
[»] chr7 (40 HSPs)
chr7 (25-90)||(9408317-9408383)
chr7 (25-90)||(24339652-24339718)
chr7 (32-82)||(21560522-21560572)
chr7 (25-82)||(2334269-2334325)
chr7 (25-90)||(11831442-11831508)
chr7 (25-90)||(11272569-11272637)
chr7 (33-82)||(18039018-18039067)
chr7 (27-90)||(26033446-26033510)
chr7 (25-90)||(15902832-15902898)
chr7 (25-71)||(25822685-25822731)
chr7 (41-90)||(27229310-27229359)
chr7 (43-90)||(11061077-11061125)
chr7 (42-82)||(15680828-15680868)
chr7 (36-90)||(5409830-5409885)
chr7 (32-90)||(7438716-7438775)
chr7 (36-90)||(9778510-9778565)
chr7 (41-90)||(3991334-3991384)
chr7 (25-75)||(4794915-4794965)
chr7 (25-90)||(6028635-6028701)
chr7 (41-90)||(27945051-27945101)
chr7 (36-82)||(32094014-32094060)
chr7 (42-90)||(21880162-21880211)
chr7 (42-90)||(25481912-25481961)
chr7 (26-67)||(41414910-41414951)
chr7 (26-82)||(1885592-1885648)
chr7 (42-82)||(21864827-21864867)
chr7 (42-81)||(18213033-18213072)
chr7 (40-90)||(19992011-19992062)
chr7 (41-90)||(7328690-7328740)
chr7 (25-90)||(11665423-11665489)
chr7 (25-90)||(13300420-13300486)
chr7 (36-82)||(13770710-13770756)
chr7 (41-90)||(18215185-18215235)
chr7 (25-90)||(32308130-32308196)
chr7 (41-90)||(43027468-43027518)
chr7 (42-90)||(3721103-3721152)
chr7 (24-81)||(8160436-8160493)
chr7 (42-90)||(28155580-28155629)
chr7 (42-82)||(19213822-19213862)
chr7 (41-81)||(22602709-22602749)
[»] chr8 (33 HSPs)
chr8 (25-90)||(2572039-2572105)
chr8 (25-90)||(15816112-15816178)
chr8 (42-90)||(24613531-24613579)
chr8 (40-90)||(8342982-8343033)
chr8 (25-90)||(22651986-22652052)
chr8 (42-90)||(20873079-20873128)
chr8 (40-90)||(8343326-8343377)
chr8 (32-90)||(25566851-25566910)
chr8 (43-90)||(31557007-31557054)
chr8 (25-90)||(29447093-29447159)
chr8 (25-90)||(29510287-29510353)
chr8 (42-90)||(4948662-4948711)
chr8 (43-90)||(4298887-4298935)
chr8 (43-90)||(22197743-22197791)
chr8 (25-81)||(26902158-26902214)
chr8 (26-81)||(7442865-7442920)
chr8 (44-90)||(40332201-40332248)
chr8 (25-90)||(28745508-28745574)
chr8 (42-90)||(5813602-5813651)
chr8 (42-90)||(30077387-30077436)
chr8 (31-90)||(13436953-13437013)
chr8 (32-90)||(11927076-11927135)
chr8 (25-64)||(27067283-27067322)
chr8 (41-75)||(16867204-16867238)
chr8 (48-82)||(18407738-18407772)
chr8 (25-90)||(21465422-21465488)
chr8 (42-80)||(24669454-24669492)
chr8 (42-90)||(13844596-13844645)
chr8 (25-78)||(29447467-29447520)
chr8 (42-90)||(33405384-33405433)
chr8 (42-90)||(36450754-36450803)
chr8 (43-90)||(20679396-20679444)
chr8 (42-82)||(22596013-22596053)
[»] chr6 (48 HSPs)
chr6 (26-90)||(16766707-16766772)
chr6 (26-90)||(9107354-9107419)
chr6 (26-90)||(21395292-21395356)
chr6 (42-90)||(28152109-28152157)
chr6 (25-90)||(5970091-5970157)
chr6 (25-90)||(8365502-8365568)
chr6 (25-82)||(8713999-8714056)
chr6 (29-82)||(9522910-9522963)
chr6 (41-90)||(10770673-10770723)
chr6 (42-90)||(403864-403913)
chr6 (42-90)||(17841589-17841638)
chr6 (42-90)||(34595144-34595193)
chr6 (42-82)||(3209401-3209441)
chr6 (23-90)||(9617444-9617512)
chr6 (41-80)||(9911527-9911566)
chr6 (41-90)||(7930315-7930365)
chr6 (25-90)||(9195737-9195803)
chr6 (41-90)||(31384930-31384980)
chr6 (42-90)||(426514-426563)
chr6 (42-90)||(853859-853908)
chr6 (41-90)||(3398629-3398678)
chr6 (42-90)||(6898281-6898330)
chr6 (42-90)||(7801156-7801205)
chr6 (42-90)||(7977830-7977879)
chr6 (42-90)||(28715305-28715354)
chr6 (43-90)||(7938126-7938174)
chr6 (25-81)||(16488573-16488629)
chr6 (25-81)||(26562709-26562765)
chr6 (42-82)||(32978899-32978939)
chr6 (42-90)||(4877952-4878002)
chr6 (44-90)||(7086805-7086852)
chr6 (36-90)||(12696334-12696389)
chr6 (44-90)||(16833318-16833365)
chr6 (41-90)||(9025493-9025543)
chr6 (25-90)||(25038054-25038120)
chr6 (26-90)||(4118317-4118382)
chr6 (42-90)||(5732510-5732559)
chr6 (42-90)||(7265593-7265642)
chr6 (41-82)||(7973673-7973714)
chr6 (42-90)||(8776973-8777022)
chr6 (41-82)||(18252750-18252791)
chr6 (31-75)||(785444-785488)
chr6 (42-82)||(1700371-1700411)
chr6 (42-82)||(7027261-7027301)
chr6 (28-80)||(16111743-16111795)
chr6 (25-81)||(18367856-18367912)
chr6 (42-82)||(26402680-26402720)
chr6 (47-90)||(31959169-31959213)
[»] chr3 (46 HSPs)
chr3 (26-90)||(1509549-1509614)
chr3 (27-90)||(34910327-34910391)
chr3 (25-82)||(14209132-14209189)
chr3 (25-90)||(14829700-14829765)
chr3 (42-90)||(55401085-55401134)
chr3 (25-90)||(4987274-4987340)
chr3 (25-90)||(28812525-28812591)
chr3 (41-90)||(28918011-28918061)
chr3 (48-90)||(35994744-35994786)
chr3 (25-90)||(41961633-41961699)
chr3 (26-90)||(15796278-15796343)
chr3 (41-82)||(27505265-27505306)
chr3 (42-82)||(8587021-8587061)
chr3 (43-90)||(10268487-10268535)
chr3 (30-82)||(55212982-55213033)
chr3 (42-90)||(25775518-25775568)
chr3 (27-82)||(34185108-34185163)
chr3 (36-90)||(49651780-49651835)
chr3 (25-90)||(750601-750667)
chr3 (25-90)||(14832109-14832175)
chr3 (45-90)||(26508120-26508166)
chr3 (42-90)||(10335286-10335335)
chr3 (42-90)||(10954962-10955011)
chr3 (41-82)||(14747581-14747622)
chr3 (41-82)||(39756255-39756296)
chr3 (42-90)||(51206353-51206402)
chr3 (27-90)||(8039820-8039884)
chr3 (42-82)||(8593156-8593196)
chr3 (42-89)||(7171513-7171560)
chr3 (44-90)||(20503475-20503522)
chr3 (36-90)||(25948881-25948936)
chr3 (25-82)||(3610652-3610710)
chr3 (23-81)||(4990948-4991006)
chr3 (41-90)||(11665954-11666004)
chr3 (25-90)||(14216902-14216968)
chr3 (25-90)||(14223031-14223097)
chr3 (41-90)||(21256985-21257035)
chr3 (42-90)||(7928460-7928509)
chr3 (42-90)||(8383267-8383316)
chr3 (41-82)||(15314875-15314916)
chr3 (42-90)||(21479128-21479177)
chr3 (42-90)||(49505154-49505203)
chr3 (42-82)||(16000016-16000056)
chr3 (27-90)||(17005604-17005668)
chr3 (34-82)||(17276744-17276792)
chr3 (42-82)||(40993335-40993375)
[»] chr5 (38 HSPs)
chr5 (25-90)||(19579711-19579777)
chr5 (25-90)||(39698551-39698617)
chr5 (25-75)||(21542056-21542106)
chr5 (25-90)||(37328827-37328893)
chr5 (25-82)||(21522769-21522826)
chr5 (25-82)||(21533335-21533392)
chr5 (42-82)||(33178044-33178084)
chr5 (24-90)||(7677715-7677782)
chr5 (23-82)||(17088304-17088363)
chr5 (33-90)||(41633745-41633803)
chr5 (42-91)||(43564890-43564940)
chr5 (42-90)||(6247632-6247681)
chr5 (42-90)||(21191056-21191105)
chr5 (26-90)||(21351889-21351954)
chr5 (47-90)||(14674279-14674323)
chr5 (42-82)||(15884007-15884047)
chr5 (36-90)||(10298579-10298634)
chr5 (25-90)||(11685949-11686014)
chr5 (41-90)||(13287398-13287448)
chr5 (25-82)||(41995490-41995545)
chr5 (26-90)||(3966513-3966578)
chr5 (42-90)||(21576745-21576794)
chr5 (25-81)||(21814281-21814337)
chr5 (43-90)||(42893370-42893418)
chr5 (36-90)||(31084333-31084388)
chr5 (46-80)||(7218271-7218305)
chr5 (25-90)||(36642745-36642811)
chr5 (41-90)||(36838553-36838603)
chr5 (25-90)||(40131631-40131697)
chr5 (42-90)||(8420037-8420086)
chr5 (41-82)||(12199949-12199990)
chr5 (42-90)||(16203795-16203844)
chr5 (46-90)||(24906305-24906350)
chr5 (42-90)||(28588674-28588723)
chr5 (25-81)||(6401518-6401574)
chr5 (26-82)||(12641693-12641749)
chr5 (43-90)||(14873527-14873575)
chr5 (42-82)||(15382498-15382538)
[»] chr4 (49 HSPs)
chr4 (42-90)||(4157160-4157208)
chr4 (42-90)||(12797338-12797386)
chr4 (32-90)||(4383378-4383436)
chr4 (42-90)||(16073405-16073453)
chr4 (42-90)||(34306804-34306852)
chr4 (44-90)||(6485613-6485660)
chr4 (42-83)||(4157454-4157495)
chr4 (42-83)||(6879465-6879506)
chr4 (25-81)||(30982861-30982917)
chr4 (43-83)||(35157986-35158026)
chr4 (50-90)||(40481647-40481687)
chr4 (42-82)||(42640548-42640588)
chr4 (44-90)||(29205454-29205501)
chr4 (41-90)||(11596351-11596401)
chr4 (25-90)||(19482678-19482744)
chr4 (25-90)||(24613684-24613750)
chr4 (21-90)||(40742601-40742671)
chr4 (25-90)||(51701268-51701334)
chr4 (42-90)||(2361975-2362024)
chr4 (42-90)||(12895274-12895323)
chr4 (41-82)||(16303265-16303306)
chr4 (42-90)||(21945513-21945562)
chr4 (25-82)||(22234873-22234930)
chr4 (42-90)||(23292986-23293035)
chr4 (25-82)||(27706160-27706217)
chr4 (42-90)||(28964248-28964297)
chr4 (41-82)||(30298966-30299007)
chr4 (41-82)||(30327834-30327875)
chr4 (42-90)||(54580023-54580072)
chr4 (34-82)||(28084541-28084589)
chr4 (42-82)||(49431045-49431085)
chr4 (43-82)||(715608-715647)
chr4 (43-82)||(752934-752973)
chr4 (36-90)||(3947760-3947815)
chr4 (36-90)||(12895110-12895165)
chr4 (28-90)||(30838220-30838283)
chr4 (25-80)||(46083974-46084029)
chr4 (23-90)||(50280891-50280960)
chr4 (25-90)||(847961-848027)
chr4 (25-90)||(903932-903998)
chr4 (42-90)||(8423718-8423767)
chr4 (29-82)||(19312354-19312407)
chr4 (25-82)||(19500841-19500898)
chr4 (50-90)||(37203274-37203315)
chr4 (43-90)||(5775359-5775407)
chr4 (41-81)||(13134470-13134510)
chr4 (43-79)||(28000743-28000779)
chr4 (42-82)||(36409512-36409552)
chr4 (42-82)||(36423678-36423718)
[»] scaffold0003 (1 HSPs)
scaffold0003 (25-83)||(241612-241670)
[»] chr2 (32 HSPs)
chr2 (25-90)||(30717513-30717579)
chr2 (25-90)||(37419753-37419819)
chr2 (25-81)||(34784965-34785021)
chr2 (41-90)||(20539673-20539723)
chr2 (25-82)||(11223846-11223903)
chr2 (33-82)||(23058433-23058482)
chr2 (42-82)||(2438719-2438759)
chr2 (42-82)||(19536397-19536437)
chr2 (43-82)||(14996224-14996263)
chr2 (28-90)||(15657874-15657937)
chr2 (41-90)||(974757-974807)
chr2 (25-90)||(26769521-26769587)
chr2 (25-82)||(4882679-4882736)
chr2 (42-90)||(18421973-18422022)
chr2 (35-80)||(29367337-29367382)
chr2 (42-90)||(30335427-30335476)
chr2 (42-90)||(30404850-30404899)
chr2 (41-82)||(33153443-33153484)
chr2 (42-90)||(37558987-37559036)
chr2 (42-82)||(5040753-5040793)
chr2 (35-90)||(12668416-12668472)
chr2 (42-82)||(18255980-18256020)
chr2 (43-90)||(18841014-18841062)
chr2 (25-73)||(35056896-35056944)
chr2 (41-90)||(36756343-36756393)
chr2 (25-90)||(44860330-44860396)
chr2 (42-90)||(15972883-15972932)
chr2 (28-81)||(32749811-32749864)
chr2 (26-90)||(34337165-34337225)
chr2 (23-90)||(36409610-36409676)
chr2 (42-79)||(44635520-44635557)
chr2 (42-74)||(21624294-21624326)
[»] scaffold0171 (2 HSPs)
scaffold0171 (25-82)||(23530-23587)
scaffold0171 (36-82)||(23439-23485)
[»] scaffold0136 (1 HSPs)
scaffold0136 (25-82)||(3832-3889)
[»] scaffold0044 (1 HSPs)
scaffold0044 (27-90)||(53190-53254)
[»] scaffold0011 (1 HSPs)
scaffold0011 (43-90)||(17750-17798)
[»] scaffold0223 (1 HSPs)
scaffold0223 (34-90)||(20182-20239)
[»] scaffold0086 (1 HSPs)
scaffold0086 (25-82)||(2947-3004)
[»] scaffold0025 (1 HSPs)
scaffold0025 (41-82)||(23789-23830)
[»] scaffold0246 (1 HSPs)
scaffold0246 (50-90)||(19586-19626)
[»] scaffold0236 (1 HSPs)
scaffold0236 (41-81)||(25767-25807)
[»] scaffold0019 (1 HSPs)
scaffold0019 (26-82)||(71744-71800)
[»] scaffold0004 (2 HSPs)
scaffold0004 (23-82)||(83179-83238)
scaffold0004 (43-79)||(123650-123686)
[»] scaffold0450 (1 HSPs)
scaffold0450 (25-90)||(8618-8684)
[»] scaffold0652 (1 HSPs)
scaffold0652 (42-90)||(462-511)
[»] scaffold0053 (1 HSPs)
scaffold0053 (42-90)||(8808-8857)
[»] scaffold0027 (1 HSPs)
scaffold0027 (42-90)||(46692-46741)
[»] scaffold0024 (1 HSPs)
scaffold0024 (26-90)||(68226-68291)
[»] scaffold0021 (1 HSPs)
scaffold0021 (45-82)||(130501-130538)
[»] scaffold0623 (1 HSPs)
scaffold0623 (25-81)||(5979-6035)
[»] scaffold0057 (1 HSPs)
scaffold0057 (26-82)||(24044-24099)
[»] scaffold0793 (1 HSPs)
scaffold0793 (43-82)||(4884-4923)
[»] scaffold0123 (1 HSPs)
scaffold0123 (26-81)||(44509-44564)
[»] scaffold0036 (1 HSPs)
scaffold0036 (25-90)||(9730-9796)
[»] scaffold0722 (1 HSPs)
scaffold0722 (42-90)||(7032-7081)
[»] scaffold0306 (1 HSPs)
scaffold0306 (42-90)||(13410-13459)
[»] scaffold0227 (1 HSPs)
scaffold0227 (50-83)||(7319-7352)
[»] scaffold0152 (1 HSPs)
scaffold0152 (42-90)||(21868-21917)
[»] scaffold0103 (1 HSPs)
scaffold0103 (50-90)||(51821-51862)
[»] scaffold0083 (1 HSPs)
scaffold0083 (42-75)||(45530-45563)
[»] scaffold0050 (1 HSPs)
scaffold0050 (42-90)||(70288-70337)
[»] scaffold0361 (1 HSPs)
scaffold0361 (51-90)||(14540-14580)
[»] scaffold0049 (1 HSPs)
scaffold0049 (43-90)||(63783-63831)


Alignment Details
Target: chr1 (Bit Score: 174; Significance: 1e-93; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 15449192 - 15449417
Alignment:
Q  2 ggattaggcatgtccatgtgtcacgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttttcaaattatgtccctagaag 101  Q
    ||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15449192 ggattaggcatgtctcggtgtcacgtgtccgacaccgatacgacacagacacttgtaattacactaaattatgtgatttttcaaattacgtccctagaag 15449291  T
Q  102 tgcttcttgcaaacaagataaaatataacttacatatgaaaatgttaaatgggaactaacctgaggagcaatgacaatgaagccatgagaagcaacatgt 201  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||| ||||  |||||||||||||| |||||||||||||| ||||||||||||||||||    
T  15449292 tgcttcttgcaaacaagataaaatataacttgcatattaaaatgtcaaataagaactaacctgaggtgcaatgacaatgaatccatgagaagcaacatgt 15449391  T
Q  202 tgaataagctgagaataaaacgagtt 227  Q
    |||||||| |||||||||||||||||    
T  15449392 tgaataagttgagaataaaacgagtt 15449417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 15443752 - 15443819
Alignment:
Q  160 acctgaggagcaatgacaatgaagccatgagaagcaacatgttgaataagctgagaataaaacgagtt 227  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  15443752 acctgaggagcaatgacaatgaagccatgagaagccacatgttggataagctgagaataaaatgagtt 15443819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 47989573 - 47989516
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  47989573 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttt 47989516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 31694694 - 31694750
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  31694694 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 31694750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 6332740 - 6332681
Alignment:
Q  31 cgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    ||||||| | |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  6332740 cgacaccaacacgacaccgatacttgtaattacactgaattatgtgatttttcaaattat 6332681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 6612154 - 6612220
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||| ||| |||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  6612154 cgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattat 6612220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 44482306 - 44482240
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||||| ||||||||||||| | |||||||||| |||||||||||||| |||||||||    
T  44482306 cgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 14359529 - 14359570
Alignment:
Q  49 gacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14359529 gacacttgtaattacactaaattatgtgatttttcaaattat 14359570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 22515887 - 22515936
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22515887 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 22515936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 22881616 - 22881665
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 22881665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 28273071 - 28273128
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||| ||||| |||||||||||||||||||||||| |||||| ||||||||    
T  28273071 cgtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgattttt 28273128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 24577185 - 24577235
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  24577185 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 24577235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 25361962 - 25361896
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||||| ||||||| ||||| | |||||||||| |||||||||||||| |||||||||    
T  25361962 cgtgtccgacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 32461447 - 32461512
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||| || ||||| ||||||||||||||| |||||||||||| |||||||||||||    
T  32461447 cgtgtccgacaccgacac-acaccaacacttgtaattacattaaattatgtgattttttcaaattat 32461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 18337388 - 18337339
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  18337388 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 18337339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 41877470 - 41877519
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattat 41877519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 46348383 - 46348432
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattat 46348432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 5376483 - 5376539
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    ||||||||||| ||| ||||||||||||||| |||||||||| |||||||| |||||    
T  5376483 cgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttatttt 5376539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 5944358 - 5944302
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||| || ||| ||||||||||||||| |||||||||| |||||||||||||||    
T  5944358 gtgtccgtcatcgacacgacaccgacacttataattacactgaattatgtgattttt 5944302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 25272542 - 25272502
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  25272542 acgacaccgacacttataattacactaaattatgtgatttt 25272502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 40258934 - 40258982
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattat 40258982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 51410084 - 51410044
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  51410084 cgacaccgacacttgtaattacactgaattatgtgattttt 51410044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 1486703 - 1486758
Alignment:
Q  36 ccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||| ||||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattat 1486758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 1815315 - 1815276
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttt 1815276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 2218299 - 2218264
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtg 76  Q
    ||||||||||||||||||||||||||||||||||||    
T  2218299 acgacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 113359 - 113309
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  113359 acgacacctacacttgtaattacactgaattatgtgattttttcaaattat 113309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 1704991 - 1705041
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||||||    
T  1704991 acgacaccgacacttgtaattaccctgaattatgtgattttttcaaattat 1705041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 9629883 - 9629949
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||| ||| ||||||||||||||| |||| ||||| |||||| ||||||| |||||||||    
T  9629883 cgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattat 9629949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 28663672 - 28663627
Alignment:
Q  37 cgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||||||||||   |||||||||||||||    
T  28663672 cgatacgacaccgacacttgtaattacatagaattatgtgattttt 28663627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 30173745 - 30173802
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||| || || |||||||||||||||||||||||||| | |||||| ||||||    
T  30173745 cgtgtccgatacggacacgacaccgacacttgtaattacactgagttatgtaattttt 30173802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 38078661 - 38078710
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattat 38078710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 42359449 - 42359498
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattat 42359498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 17778625 - 17778581
Alignment:
Q  23 cacgtgtc-cgacaccgatacgacaccgacacttgtaattacact 66  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||    
T  17778625 cacgtgtcgcgacaccgacacgacaccgacacttgtaattacact 17778581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 31015097 - 31015053
Alignment:
Q  47 ccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattat 31015053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 34371785 - 34371733
Alignment:
Q  29 tccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    ||||||||| | ||||||||||||| | |||||||||| ||||||||||||||    
T  34371785 tccgacaccaacacgacaccgacacatataattacactgaattatgtgatttt 34371733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 48450592 - 48450636
Alignment:
Q  47 ccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||||||||| | |||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattat 48450636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 18556446 - 18556505
Alignment:
Q  32 gacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||||  |||||||| | ||||||||||||| ||||||||||||| ||||||||||||    
T  18556446 gacaccgtcacgacaccaatacttgtaattacattaaattatgtgatattttcaaattat 18556505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 40917825 - 40917761
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||| ||||||| |||||||||| ||||||||||||||| |||  ||||| |||||||||||||    
T  40917825 cgtgtccaacaccgacacgacaccgagacttgtaattacacttaat--tgtgattttttcaaattat 40917761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 9828120 - 9828054
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||| ||||| || ||||||||||||| |  ||||||||| |||||||||||||| |||||||||    
T  9828120 cgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattat 9828054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 21378635 - 21378597
Alignment:
Q  44 acaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttt 21378597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 27471557 - 27471615
Alignment:
Q  33 acaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||| |||||| |||| |||||||||||| ||||||||| |||| |||||||||    
T  27471557 acaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattat 27471615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 35919270 - 35919316
Alignment:
Q  36 ccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||| ||||||| ||||||| |||||||||| |||||||||||||||    
T  35919270 ccgacacgacacggacacttataattacactgaattatgtgattttt 35919316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 5927340 - 5927389
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||| |||||||||||||||| |||||||| ||| |||||||||||||    
T  5927340 cgacactgacacttgtaattacattaaattatatgattttttcaaattat 5927389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 6427540 - 6427483
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||| || | ||||||| |||||||||| ||||| | |||||||||||||||    
T  6427540 cgtgtccgacgcctacacgacactgacacttgtagttacattgaattatgtgattttt 6427483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 9103698 - 9103650
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  9103698 cgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattat 9103650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 14332642 - 14332691
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||| || | ||||||||||||||||||||||||| |||||||||    
T  14332642 cgacaccgagacatataattacactaaattatgtgattttctcaaattat 14332691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 19058856 - 19058889
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgt 75  Q
    ||||||||||||||||||||||||| ||||||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgt 19058889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 31672895 - 31672944
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||| ||||||||||||||| ||||| |||| |||||||||||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattat 31672944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 13011223 - 13011255
Alignment:
Q  50 acacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||| |||||||||||||||    
T  13011223 acacttgtaattacacttaattatgtgattttt 13011255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 18190109 - 18190157
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||| ||||||||||||||||||| |||||||| | |||||||||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgtaattttttcaaattat 18190157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 18471355 - 18471319
Alignment:
Q  46 accgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  18471355 accgacacttgtaattatactgaattatgtgattttt 18471319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 21621014 - 21620974
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||| ||||||| |||||| |||||||||||||||    
T  21621014 cgacaccgacgcttgtaaatacactgaattatgtgattttt 21620974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 24334705 - 24334737
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatg 74  Q
    ||||||||||||||||||||||||| |||||||    
T  24334705 cgacaccgacacttgtaattacactgaattatg 24334737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 25934692 - 25934636
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    ||||||||||||||| |||| |||||||| | ||||||||||  ||| |||||||||    
T  25934692 cgtgtccgacaccgacacgataccgacacatataattacactgtattttgtgatttt 25934636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 36878519 - 36878471
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||| | |||||||||| |||||||||||||| |||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattat 36878471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 9408317 - 9408383
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9408317 cgtgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 9408383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 24339718 - 24339652
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  24339718 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 24339652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 21560572 - 21560522
Alignment:
Q  32 gacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21560572 gacaccgatacgacaccgacacttgtaattacactgaattatgtgattttt 21560522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 2334325 - 2334269
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  2334325 cgtgtccgacac-gacacgacaccgacacttgtaattacactaaattatgtgattttt 2334269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 11831508 - 11831442
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||| ||| |||||||||||||    
T  11831508 cgtgtccgacaccgatacgacacgaatacttgtaattacactaaattatatgattttttcaaattat 11831442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 11272569 - 11272637
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaat--tatgtga-tttttcaaattat 90  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||  ||||||| |||||||||||||    
T  11272569 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattat 11272637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 18039067 - 18039018
Alignment:
Q  33 acaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  18039067 acaccgacacgacaccgacacttgtaattacactgaattatgtgattttt 18039018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 26033446 - 26033510
Alignment:
Q  27 tgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||| |||||||| |||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  26033446 tgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattat 26033510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 15902898 - 15902832
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||| ||||| || |||||||||| | ||||||||||||||||||||||||| |||||||||    
T  15902898 cgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattat 15902832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 25822731 - 25822685
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaatt 71  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  25822731 cgtgtccgataccgatacgacaccgacacttgtaattacactgaatt 25822685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 27229310 - 27229359
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  27229310 acgacaccgatacttataattacactaaattatgtgattttacaaattat 27229359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 11061077 - 11061125
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattat 11061125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 15680868 - 15680828
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  15680868 cgacaccgacacttataattacactaaattatgtgattttt 15680828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 5409830 - 5409885
Alignment:
Q  36 ccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||| ||||||||||||||||||||| |||| |||||||||| |||||||||||||    
T  5409830 ccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattat 5409885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 7438775 - 7438716
Alignment:
Q  32 gacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||||| | |||||||||||||||||||||| | ||||||||||| ||||||||||||    
T  7438775 gacaccgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattat 7438716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 9778565 - 9778510
Alignment:
Q  36 ccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||| |||||||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  9778565 ccgacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattat 9778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 3991384 - 3991334
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtgattttttcaaattat 3991334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 4794965 - 4794915
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgt 75  Q
    |||||||||||||||||||  |||||||||| |||||||||| ||||||||    
T  4794965 cgtgtccgacaccgatacggtaccgacacttataattacactgaattatgt 4794915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 6028701 - 6028635
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||| |||||| || |||||||||||| ||||||||||| |||||||||| || ||||||||||||    
T  6028701 cgtgttcgacactgacacgacaccgacatttgtaattacattaaattatgttatattttcaaattat 6028635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 27945101 - 27945051
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||||||||||||||||||| |||||||| ||||| |||||||||    
T  27945101 acgacaccgacacttgtaattacactgaattatgtaattttctcaaattat 27945051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 32094014 - 32094060
Alignment:
Q  36 ccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||| |||||||||||| ||||||||||||| |||||||||||||||    
T  32094014 ccgacacgacaccgacatttgtaattacactgaattatgtgattttt 32094060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 21880211 - 21880162
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||||||||||||||| |||||||| ||||| |||||||||    
T  21880211 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattat 21880162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 25481961 - 25481912
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  25481961 cgacaccaacacttgtaattacactgaattatgtgattttttcaaattat 25481912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 41414951 - 41414910
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacacta 67  Q
    |||| ||||| |||||||||||||||||||||||||||||||    
T  41414951 gtgtacgacatcgatacgacaccgacacttgtaattacacta 41414910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 1885648 - 1885592
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||| | ||||||||||||||||| |||||| | |||||||| ||||||    
T  1885648 gtgtccgacaccaacacgacaccgacacttgtgattacattgaattatgtcattttt 1885592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 21864867 - 21864827
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  21864867 cgacagcgacacttgtaattacactaaattatatgattttt 21864827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 18213033 - 18213072
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  18213033 cgacaccgacacatataattacactaaattatgtgatttt 18213072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 19992062 - 19992011
Alignment:
Q  40 tacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||||||||| |||||||||| || ||||||||||| |||||||||    
T  19992062 tacgacaccgacacttataattacactgaaatatgtgattttctcaaattat 19992011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 7328690 - 7328740
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||| | ||||||||||||||||||| ||||| |||||||||    
T  7328690 acgacaccgacacatataattacactaaattatgttattttctcaaattat 7328740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 11665423 - 11665489
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||| ||||||||| | |||| |||||||| |||||| ||| |||||||||| |||||||||||||    
T  11665423 cgtgttcgacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaattat 11665489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 13300486 - 13300420
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||| ||||||||| | |||||||| ||| ||||||||||| |||||| ||| |||||||||||||    
T  13300486 cgtgttcgacaccgacatgacaccgagactggtaattacactgaattatatgattttttcaaattat 13300420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 13770756 - 13770710
Alignment:
Q  36 ccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||| |||||| ||||||||||||||||||| |||||||| ||||||    
T  13770756 ccgacacgacaacgacacttgtaattacactgaattatgtaattttt 13770710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 18215185 - 18215235
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||| ||||||  ||||||||| |||||||||||||    
T  18215185 acgacaccgacacttgtaactacactgcattatgtgattttttcaaattat 18215235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 32308196 - 32308130
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||| ||||||| ||||||| ||||| |  ||||||||| |||||||||||||| |||||||||    
T  32308196 cgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattat 32308130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 43027468 - 43027518
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||| |||||||  ||||||||| |||||||||||||    
T  43027468 acgacaccgacacttgtatttacactgcattatgtgattttttcaaattat 43027518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 3721152 - 3721103
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||||| | |||||| |||||||||||||||||| |||||||||    
T  3721152 cgacaccgacacatataattatactaaattatgtgattttctcaaattat 3721103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 8160493 - 8160436
Alignment:
Q  24 acgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    |||||| ||||||||| |||| ||| |||| | ||||||||||||||||||| |||||    
T  8160493 acgtgttcgacaccgacacgataccaacacatataattacactaaattatgtaatttt 8160436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 28155629 - 28155580
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||||||||||||||  |||||||| ||||| |||||||||    
T  28155629 cgacaccgacacttgtaattacaccgaattatgtaattttctcaaattat 28155580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 19213862 - 19213822
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||| |||||||  ||||||||||||||    
T  19213862 cgacaccgacacttgtatttacactgcattatgtgattttt 19213822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 22602709 - 22602749
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    ||||||||||||| | |||||||||| ||||||||||||||    
T  22602709 acgacaccgacacatataattacactgaattatgtgatttt 22602749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 2572039 - 2572105
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2572039 cgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 2572105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 15816112 - 15816178
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  15816112 cgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaattat 15816178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 24613579 - 24613531
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24613579 cgacaccgacacttgtaattacacttaattatgtgatttttcaaattat 24613531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 8343033 - 8342982
Alignment:
Q  40 tacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8343033 tacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 8342982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 22652052 - 22651986
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||| |||||||||||||||||||||| | | ||||||||||| ||||||||||||    
T  22652052 cgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattat 22651986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 20873128 - 20873079
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 20873079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 8343377 - 8343326
Alignment:
Q  40 tacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  8343377 tacgacactgacacttgtaattacactaaattatgtgattttttcaaattat 8343326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 25566910 - 25566851
Alignment:
Q  32 gacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||| | |||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  25566910 gacaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 25566851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 31557054 - 31557007
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtgatttttcaaattat 31557007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 29447093 - 29447159
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||||| | |||||||||||||||| ||||| | |||||||||||||| |||||||||    
T  29447093 cgtgtccgacaccgacatgacaccgacacttgtagttacattgaattatgtgattttctcaaattat 29447159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 29510287 - 29510353
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||| || ||||||||||||||||||| ||| |||| ||||| |||||||||||||    
T  29510287 cgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattat 29510353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 4948711 - 4948662
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 4948662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 4298887 - 4298935
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattat 4298935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 22197743 - 22197791
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtg-atttttcaaattat 90  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattat 22197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 26902158 - 26902214
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    ||||||||||||  ||||||||||||||| | |||||||||| ||||||||||||||    
T  26902158 cgtgtccgacactcatacgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 7442920 - 7442865
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    ||||||||||| ||||| ||||| ||||||||||||||||| |||||||| |||||    
T  7442920 gtgtccgacactgatacaacaccaacacttgtaattacactgaattatgtaatttt 7442865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 40332248 - 40332201
Alignment:
Q  44 acaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaattat 40332201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 28745574 - 28745508
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtg-atttttcaaattat 90  Q
    ||||||||||||||| |||||| ||||| ||||| ||||| | ||||||||| ||||||||||||||    
T  28745574 cgtgtccgacaccgacacgacatcgacatttgtagttacattgaattatgtgaatttttcaaattat 28745508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 5813651 - 5813602
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  5813651 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattat 5813602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 30077387 - 30077436
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||    
T  30077387 cgacacggacacttgtaattacactgaattatgtgatgttttcaaattat 30077436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 13436953 - 13437013
Alignment:
Q  31 cgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||| ||||||||||||||||| |||||  | |||||||||| |||||||||||||    
T  13436953 cgacaccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattat 13437013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 11927076 - 11927135
Alignment:
Q  32 gacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||| | ||||||||||||| | |||||||||| |||||||||||||| |||||||||    
T  11927076 gacaccaacacgacaccgacacatataattacactgaattatgtgattttatcaaattat 11927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 27067283 - 27067322
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattaca 64  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  27067283 cgtgtccgacaccgacacgacactgacacttgtaattaca 27067322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 16867204 - 16867238
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgt 75  Q
    ||||||||||||||| |||||||||||||||||||    
T  16867204 acgacaccgacacttataattacactaaattatgt 16867238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 18407772 - 18407738
Alignment:
Q  48 cgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||| |||||||||||||||    
T  18407772 cgacacttgtaattacactgaattatgtgattttt 18407738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 21465488 - 21465422
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||| || |||||||| |||||||||||||||   |||||| ||| |||||||||||||    
T  21465488 cgtgtccgacactgacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattat 21465422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 24669492 - 24669454
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattt 80  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaattt 24669454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 13844596 - 13844645
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||||| | |||||||||| |||||||||||||| |||||||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattat 13844645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 29447520 - 29447467
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat 78  Q
    |||||| |||||||| |||||||| |||| | |||||||||| |||||||||||    
T  29447520 cgtgtctgacaccgacacgacaccaacacatataattacacttaattatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 33405384 - 33405433
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||||| | |||||||||||||||||||| |||| |||||||||    
T  33405384 cgacaccgacacatataattacactaaattatgtgtttttctcaaattat 33405433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 36450754 - 36450803
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||| ||||||||||||||||| |||| ||||| |||||||||||||    
T  36450754 cgacacctacacttgtaattacactgaattctgtgattttttcaaattat 36450803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 20679396 - 20679444
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||| |||||||||| || ||||||||||| |||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattat 20679444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 22596053 - 22596013
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||| ||||||||||||||||| |||||||| ||||||    
T  22596053 cgacaccaacacttgtaattacactgaattatgttattttt 22596013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 16766772 - 16766707
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  16766772 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 16766707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 9107354 - 9107419
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  9107354 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattat 9107419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 21395292 - 21395356
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  21395292 gtgtccgacactgacacgacaccgacacttgtaattacactaaattatgtattttctcaaattat 21395356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 28152157 - 28152109
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28152157 cgacaccgacacttgtaattacactgaattatgtgatttttcaaattat 28152109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 5970091 - 5970157
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||| |||||||| ||| ||||||||||||| |||||||||| |||||||||||||    
T  5970091 cgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattat 5970157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 8365502 - 8365568
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||| ||||| |||||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  8365502 cgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattat 8365568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 8714056 - 8713999
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||| |||||||| ||| ||||||||||||| |||||||||||||||    
T  8714056 cgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttt 8713999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 9522963 - 9522910
Alignment:
Q  29 tccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||| || ||||||||||||||||||||||| |||||||||||||||    
T  9522963 tccgacaccgacacaacaccgacacttgtaattacactgaattatgtgattttt 9522910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 10770673 - 10770723
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  10770673 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 10770723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 403864 - 403913
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  403864 cgacaccgacacttgtagttacactaaattatgtgattttttcaaattat 403913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 17841589 - 17841638
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  17841589 cgacaccgtcacttgtaattacactaaattatgtgattttttcaaattat 17841638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 34595193 - 34595144
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  34595193 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 34595144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 3209441 - 3209401
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  3209441 cgacaccgacacttgtaataacactaaattatgtgattttt 3209401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 9617512 - 9617444
Alignment:
Q  23 cacgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||||||  ||||||||||||| | |||||||| | |||||||||||||| |||||||||    
T  9617512 cacgtgtccgacaccgcgacgacaccgacacatataattacattgaattatgtgattttctcaaattat 9617444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 9911527 - 9911566
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgattt 80  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  9911527 acgacaccgacacttgtaattacactgaattatgtgattt 9911566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 7930365 - 7930315
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  7930365 acgacaccgacacttgaaatttcactaaattatgtgattttttcaaattat 7930315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 9195737 - 9195803
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||| |||||| | ||||||||||||| | ||||||||||||||||||| ||||| |||||||||    
T  9195737 cgtgtcagacacctacacgacaccgacacatataattacactaaattatgtcattttctcaaattat 9195803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 31384980 - 31384930
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||||||    
T  31384980 acgacactgacacttgtaattacactgaattatgtgattttttcaaattat 31384930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 426514 - 426563
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattat 426563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 853859 - 853908
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||||| |||| |||||||||| |||||||||||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattat 853908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 3398678 - 3398629
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    |||||||||| |||| |||||||||| |||||| ||||||||||||||||    
T  3398678 acgacaccgatacttataattacactgaattatatgatttttcaaattat 3398629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 6898281 - 6898330
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattt-ttcaaattat 90  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  6898281 cgacaccgacacttgtaattacacttaattatgtaatttgttcaaattat 6898330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 7801156 - 7801205
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||||||| || |||||||||| |||||||||||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattat 7801205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 7977830 - 7977879
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattat 7977879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 28715354 - 28715305
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattat 28715305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 7938174 - 7938126
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattat 7938126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 16488573 - 16488629
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    ||||||||||||||| ||||||||||||| | ||||||||||  ||| |||||||||    
T  16488573 cgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgatttt 16488629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 26562765 - 26562709
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    ||||| ||||||||| |||||| |||||| | |||||||||| ||||||||||||||    
T  26562765 cgtgttcgacaccgacacgacatcgacacatataattacactgaattatgtgatttt 26562709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 32978899 - 32978939
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||||||| ||||||||| |||||    
T  32978899 cgacaccgacacttgtaattacacttaattatgtgtttttt 32978939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 4878002 - 4877952
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga--tttttcaaattat 90  Q
    ||||||||||||||||||||| ||| ||||||||||  |||||||||||||    
T  4878002 cgacaccgacacttgtaattatacttaattatgtgacttttttcaaattat 4877952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 7086852 - 7086805
Alignment:
Q  44 acaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||| | ||||||||||||||||||||||||| |||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattat 7086805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 12696389 - 12696334
Alignment:
Q  36 ccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||| ||||||| |||||||||||||||||| |||||||| | |||||||||||||    
T  12696389 ccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattat 12696334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 16833365 - 16833318
Alignment:
Q  44 acaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattat 16833318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 9025493 - 9025543
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||| | |||||||||| |||||||||||||| |||||||||    
T  9025493 acgacaccgacacatataattacactgaattatgtgattttctcaaattat 9025543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 25038054 - 25038120
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||| |||||| | || | ||||||| |||||||||||||||||||||| ||||| |||||||||    
T  25038054 cgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgtaattttctcaaattat 25038120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 4118317 - 4118382
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||| || || | ||| ||||||||||||||| | |||||||||| |||||||||||||    
T  4118317 gtgtccgacactgacacaaaaccaacacttgtaattacatttaattatgtgattttttcaaattat 4118382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 5732510 - 5732559
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||||| | ||||||||||||| ||||||||||| |||||||||    
T  5732510 cgacaccgacacatataattacactaaaatatgtgattttctcaaattat 5732559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 7265593 - 7265642
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||||| | |||||||||| |||||||||||||| |||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattat 7265642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 7973714 - 7973673
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||| |||||||||| |||||||| ||||||    
T  7973714 acgacaccgacacttataattacacttaattatgtaattttt 7973673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 8776973 - 8777022
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||| ||||||||||||||||| |||| ||||| |||||||||||||    
T  8776973 cgacaccaacacttgtaattacactgaattttgtgattttttcaaattat 8777022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 18252750 - 18252791
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||| |||||||| ||||||||||||||||||||| ||||||    
T  18252750 acgataccgacacctgtaattacactaaattatgtcattttt 18252791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 785444 - 785488
Alignment:
Q  31 cgacaccgatacgacaccgacacttgtaattacactaaattatgt 75  Q
    ||||||||| ||||||||||||||||| |||||| | ||||||||    
T  785444 cgacaccgacacgacaccgacacttgtgattacattgaattatgt 785488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 1700411 - 1700371
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||| |||||||||| || ||||||||||||    
T  1700411 cgacaccgacacttataattacactgaaatatgtgattttt 1700371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 7027301 - 7027261
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||| | |||||||||| |||||||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgattttt 7027261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 16111743 - 16111795
Alignment:
Q  28 gtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattt 80  Q
    ||||||| |||| ||||||| ||||| | ||||||||||||||||||| ||||    
T  16111743 gtccgactccgacacgacactgacacctataattacactaaattatgtaattt 16111795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 18367912 - 18367856
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    |||||| |||||||| ||||||||||||| | ||||||||||  ||| |||||||||    
T  18367912 cgtgtctgacaccgacacgacaccgacacatataattacactgcattttgtgatttt 18367856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 26402680 - 26402720
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||||| |||||||| |||||||| ||||||    
T  26402680 cgacaccgacacttgtgattacactgaattatgtcattttt 26402720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 31959213 - 31959169
Alignment:
Q  47 ccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattat 31959169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 1509614 - 1509549
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1509614 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 1509549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 34910391 - 34910327
Alignment:
Q  27 tgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  34910391 tgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattat 34910327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 14209189 - 14209132
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  14209189 cgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttt 14209132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 14829765 - 14829700
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    ||||||| ||||||| |||||||||||||||||||||||  | |||||||||||||||||||||||    
T  14829765 cgtgtccaacaccgacacgacaccgacacttgtaattaccatgaattatgtgatttttcaaattat 14829700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 55401134 - 55401085
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  55401134 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 55401085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 4987274 - 4987340
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||| ||||||| ||| |||| ||||||||||||||||| |||||||||| |||||||||||||    
T  4987274 cgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattat 4987340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 28812591 - 28812525
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattt-ttcaaattat 90  Q
    |||||| |||||| | ||||||||||||||||||| |||||| ||||||||||||| ||||||||||    
T  28812591 cgtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtgatttcttcaaattat 28812525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 28918061 - 28918011
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  28918061 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 28918011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 35994744 - 35994786
Alignment:
Q  48 cgacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtgatttttcaaattat 35994786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 41961633 - 41961699
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||| ||||| |||||||||||||||||||||||||  ||| ||||||| ||||||||||||    
T  41961633 cgtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattat 41961699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 15796278 - 15796343
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||| | |||||||||||| ||||||||||||| |||||| ||| |||||||||||||    
T  15796278 gtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaattat 15796343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 27505306 - 27505265
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  27505306 acgacaccgacacttgtaattacacttaattatgtgattttt 27505265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 8587021 - 8587061
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttt 8587061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 10268487 - 10268535
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattat 10268535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 55213033 - 55212982
Alignment:
Q  30 ccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  55213033 ccgacaccgacac-acaccgacacttgtaattgcactaaattatgtgattttt 55212982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 25775568 - 25775518
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgat--ttttcaaattat 90  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  25775568 cgacaccgacacttgtaattacactgaattatgtgattattttcaaattat 25775518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 34185108 - 34185163
Alignment:
Q  27 tgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||  || |||||||||||||||||||||||||| |||| ||||||||||    
T  34185108 tgtccgacatggacacgacaccgacacttgtaattacactgaattgtgtgattttt 34185163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 49651780 - 49651835
Alignment:
Q  36 ccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||| |||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  49651780 ccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattat 49651835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 750601 - 750667
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||| ||||| ||||||||||||||||||||| ||   ||||||||||| ||||||||||||    
T  750601 cgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattat 750667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 14832175 - 14832109
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||| ||||| ||||||| |||||||||||||||| | | ||||||||| ||||||||||||    
T  14832175 cgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattat 14832109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 26508166 - 26508120
Alignment:
Q  45 caccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattat 26508120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 10335286 - 10335335
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  10335286 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattat 10335335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 10955011 - 10954962
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  10955011 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattat 10954962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 14747622 - 14747581
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||| ||| ||||||||||||||||||||||||||||||    
T  14747622 acgacacggacccttgtaattacactaaattatgtgattttt 14747581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 39756296 - 39756255
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  39756296 acgacaccgacacttgtaattatattaaattatgtgattttt 39756255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 51206353 - 51206402
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  51206353 cgacaccgacacttgtatttacactgaattatgtgattttttcaaattat 51206402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 8039820 - 8039884
Alignment:
Q  27 tgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||| | ||||| |||||||||    
T  8039820 tgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattat 8039884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 8593196 - 8593156
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  8593196 cgacaccgacacttgtaattatactgaattatgtgattttt 8593156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 7171560 - 7171513
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttttcaaatta 89  Q
    ||||||| ||||||||||||||||  |||||| |||||||||||||||    
T  7171560 cgacaccaacacttgtaattacaccgaattatatgatttttcaaatta 7171513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 20503522 - 20503475
Alignment:
Q  44 acaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||| |||||||| | |||||||||||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcattttttcaaattat 20503475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 25948881 - 25948936
Alignment:
Q  36 ccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||| |||||||| |||||| |||||||||| |||||||||| |||||||||||||    
T  25948881 ccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattat 25948936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 3610710 - 3610652
Alignment:
Q  25 cgtgtccgacaccgatacg-acaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||| | |||||| ||||||    
T  3610710 cgtgtccgacaccgatacggacaacgacactggtaattacactgagttatgttattttt 3610652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 4990948 - 4991006
Alignment:
Q  23 cacgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    |||||||| || ||| | ||||| |||||||||||||||||||| |||||||| |||||    
T  4990948 cacgtgtctgataccaacacgacgccgacacttgtaattacactgaattatgtaatttt 4991006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 11666004 - 11665954
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||| | ||||||||||||||| ||||||||| |||||||||    
T  11666004 acgacaccgacacatataattacactaaattgtgtgattttatcaaattat 11665954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 14216968 - 14216902
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||  | ||||||| |||||||||||||||||| |||||| |||| |||| |||||||    
T  14216968 cgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaaattat 14216902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 14223097 - 14223031
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||  | ||||||| |||||||||||||||||| |||||| |||| |||| |||||||    
T  14223097 cgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaaattat 14223031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 21256985 - 21257035
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||| ||||||||||||||||| ||| |||||||||| |||||||||||||    
T  21256985 acgataccgacacttgtaattatactgaattatgtgattttttcaaattat 21257035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 7928509 - 7928460
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||||||||| | |||||||||| ||||||||||| ||||||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattat 7928460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 8383316 - 8383267
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||||||| |||||||||| |||||| ||||||| |||||||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattat 8383267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 15314875 - 15314916
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||| |||| | ||||||||||||||||||||||||||    
T  15314875 acgacaccaacacatataattacactaaattatgtgattttt 15314916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 21479177 - 21479128
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||| ||||||||||| |||| ||||| |||||||||||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattat 21479128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 49505154 - 49505203
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||| ||||| | ||||||||||||||||||||||||| |||||||||    
T  49505154 cgacactgacacatataattacactaaattatgtgattttctcaaattat 49505203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 16000016 - 16000056
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||| ||||||| |||||||| ||||||    
T  16000016 cgacaccgacacttgtagttacactgaattatgttattttt 16000056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 17005604 - 17005668
Alignment:
Q  27 tgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||| |||||| | || |||||||||||| |||||||||| |||||| ||||||| |||||||||    
T  17005604 tgtctgacaccaacacaacaccgacacttataattacactgaattatatgattttatcaaattat 17005668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 17276792 - 17276744
Alignment:
Q  34 caccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||| ||||||| |||||||||||||| || |||||||||| |||||    
T  17276792 caccgacacgacactgacacttgtaattataccaaattatgtgtttttt 17276744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 40993335 - 40993375
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||| | |||||||||| |||||||||||||||    
T  40993335 cgacaccgacacatataattacactgaattatgtgattttt 40993375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 19579777 - 19579711
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||||| || ||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  19579777 cgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattat 19579711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 39698617 - 39698551
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||||    
T  39698617 cgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattat 39698551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 21542106 - 21542056
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgt 75  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  21542106 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgt 21542056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 37328827 - 37328893
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt-caaattat 90  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||| |||||||||| ||||||||    
T  37328827 cgtgtccgacaccgacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattat 37328893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 21522826 - 21522769
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||| |||||||||||| ||||||||||||| |||||||| ||||||    
T  21522826 cgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttt 21522769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 21533392 - 21533335
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||| |||||||||||| ||||||||||||| |||||||| ||||||    
T  21533392 cgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttt 21533335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 33178084 - 33178044
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgattttt 33178044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 7677782 - 7677715
Alignment:
Q  24 acgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||| |||||||| ||||||||||||||| ||||| |||| ||||||||||| ||||||||||||    
T  7677782 acgtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattat 7677715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 17088363 - 17088304
Alignment:
Q  23 cacgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||| |||||||||| ||||||  |||||||||||| |||||||||||||||||||||    
T  17088363 cacgtgaccgacaccgacacgacagtgacacttgtaatcacactaaattatgtgattttt 17088304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 41633803 - 41633745
Alignment:
Q  33 acaccgatacgacaccgacacttgtaattacactaaattatgt-gatttttcaaattat 90  Q
    |||||||||||||||||||| ||||||||||||| ||||||||  ||||||||||||||    
T  41633803 acaccgatacgacaccgacatttgtaattacactgaattatgtaaatttttcaaattat 41633745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 43564940 - 43564890
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt-caaattatg 91  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  43564940 cgacaccgacacttataattacactaaattatgtgatttttccaaattatg 43564890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 6247681 - 6247632
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 6247632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 21191056 - 21191105
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  21191056 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 21191105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 21351889 - 21351954
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||| |||||||| | |||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  21351889 gtgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattat 21351954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 14674323 - 14674279
Alignment:
Q  47 ccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattat 14674279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 15884047 - 15884007
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  15884047 cgacaccgacacttgtaattacactgaattatgtgattttt 15884007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 10298634 - 10298579
Alignment:
Q  36 ccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||||||||| |  ||||||||| |||||||||||||    
T  10298634 ccgatacgacaccgacacttgtaattacattgtattatgtgactttttcaaattat 10298579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 11686014 - 11685949
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||| ||||||||||||| | |||||||||||||||||| || ||| |||||||||    
T  11686014 cgtgtccgacaccga-acgacaccgacacatataattacactaaattatgcgactttctcaaattat 11685949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 13287398 - 13287448
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  13287398 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattat 13287448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 41995545 - 41995490
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||| ||||||||||  |||||||| | |||||||||||||||    
T  41995545 cgtgtccgacaccgatacggcaccgacact--taattacattgaattatgtgattttt 41995490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 3966578 - 3966513
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||| || ||||||||||||| | |||||||||| |||| ||||||||| |||||||||    
T  3966578 gtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattat 3966513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 21576745 - 21576794
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  21576745 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattat 21576794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 21814337 - 21814281
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    ||||||||||||||| ||||||||||||| | ||||||||||  ||| |||||||||    
T  21814337 cgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgatttt 21814281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 42893418 - 42893370
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattat 42893370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 31084388 - 31084333
Alignment:
Q  36 ccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||| |||||| ||||||||||||||||| | ||||||||||| ||||||||||||    
T  31084388 ccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattat 31084333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 7218271 - 7218305
Alignment:
Q  46 accgacacttgtaattacactaaattatgtgattt 80  Q
    ||||||||||||||||||||| |||||||||||||    
T  7218271 accgacacttgtaattacactgaattatgtgattt 7218305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 36642745 - 36642811
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||| | | ||||||||||||| || |||||||||| ||||| | |||||||||||||    
T  36642745 cgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatgtcactttttcaaattat 36642811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 36838603 - 36838553
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||| | ||||||||||||||||||| ||||| |||||||||    
T  36838603 acgacaccgacacatataattacactaaattatgtaattttctcaaattat 36838553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 40131697 - 40131631
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||| |||| |||||||||||||| | || |||||| ||| ||||||||||| ||||||||||||    
T  40131697 cgtgtctgacatcgatacgacaccgatatttataattaaactgaattatgtgattttttcaaattat 40131631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 8420086 - 8420037
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||| | |||||||| | |||||||||||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttttcaaattat 8420037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 12199990 - 12199949
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||||||||||  ||| |||||||||||||||    
T  12199990 acgacaccgacacttgtaattgtactgaattatgtgattttt 12199949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 16203795 - 16203844
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||||| | |||||||||||||||||| |||||| |||||||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattat 16203844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 24906305 - 24906350
Alignment:
Q  46 accgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||| |||||||| | |||||||||||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttttcaaattat 24906350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 28588674 - 28588723
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||||| | |||||||||| |||||||||||||| |||||||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattat 28588723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 6401574 - 6401518
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    |||||||||||| || ||||||||||||| | ||||||||||  ||| |||||||||    
T  6401574 cgtgtccgacactgacacgacaccgacacatataattacactgtattttgtgatttt 6401518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 12641749 - 12641693
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||| |||||| | ||||||| ||||| || ||||| |||||||||||||||||||    
T  12641749 gtgtctgacaccaacacgacactgacacgtgcaattatactaaattatgtgattttt 12641693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 14873575 - 14873527
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||| | |||||||||||||||||||| |||| |||||||||    
T  14873575 gacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 15382538 - 15382498
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||| ||| |||||| ||||||||    
T  15382538 cgacaccgacacttgtaattatactgaattatatgattttt 15382498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 4157208 - 4157160
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4157208 cgacaccgacacttgtaattgcactaaattatgtgatttttcaaattat 4157160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 12797338 - 12797386
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12797338 cgacaccgacacttgtaattacactgaattatgtgatttttcaaattat 12797386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 4383436 - 4383378
Alignment:
Q  32 gacaccgatacgacaccgacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    |||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  4383436 gacaccgacacgacactgacatttgtaattacactgaattatgtgatttttcaaattat 4383378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 16073453 - 16073405
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  16073453 cgacaccgacacttgtaattacactgaattatgcgatttttcaaattat 16073405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 34306804 - 34306852
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  34306804 cgacaccgacacttgtaattacactacattatctgatttttcaaattat 34306852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 6485613 - 6485660
Alignment:
Q  44 acaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattat 6485660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 4157495 - 4157454
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttttc 83  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  4157495 cgacaccgacacttgtaattgcactaaattatgtgatttttc 4157454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 6879465 - 6879506
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttttc 83  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  6879465 cgacaccgacacttgtaattacacttaattatgtgatttttc 6879506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 30982861 - 30982917
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    |||||| |||||||| ||||||||||||||| |||||||||| || |||||||||||    
T  30982861 cgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgatttt 30982917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 35157986 - 35158026
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgatttttc 83  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttc 35158026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 40481687 - 40481647
Alignment:
Q  50 acacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  40481687 acacttgtaattacactgaattatgtgatttttcaaattat 40481647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 42640588 - 42640548
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  42640588 cgacaccgacacttgtaattacactgaattatgtgattttt 42640548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 29205501 - 29205454
Alignment:
Q  44 acaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattat 29205454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 11596351 - 11596401
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  11596351 acgacacctacacttgtaattacactgaattatgtgattttttcaaattat 11596401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 19482744 - 19482678
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||| | ||||| |||||||| ||||||||||||||||  ||||||||||| ||||||||||||    
T  19482744 cgtgtccaataccgacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattat 19482678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 24613684 - 24613750
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||| |||||||| | |||||||||||||||| ||||| | |||||||||||||| |||||||||    
T  24613684 cgtgtctgacaccgacatgacaccgacacttgtacttacattgaattatgtgattttctcaaattat 24613750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 40742671 - 40742601
Alignment:
Q  21 gtcacgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||| |||||||| |||||| |||||| | ||||||||||| ||||| ||||||| |||||||||    
T  40742671 gtcacgtgtctgacaccgacacgacatcgacacatataattacactagattatatgattttctcaaattat 40742601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 51701334 - 51701268
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||| ||||||||| |||||||  ||||||||||||||||| |||||||| | |||||||||||||    
T  51701334 cgtgttcgacaccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattat 51701268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 2361975 - 2362024
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||| ||||||||||||||||||| | |||||||||||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattat 2362024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 12895274 - 12895323
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  12895274 cgacaccgacacttataattacacaaaattatgtgattttttcaaattat 12895323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 16303265 - 16303306
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  16303265 acgacaccgacacttgtaattacactaaattatatcattttt 16303306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 21945562 - 21945513
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattat 21945513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 22234873 - 22234930
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||| |||||||| ||||||||||||| |  ||||||||| |||||||||||||||    
T  22234873 cgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgattttt 22234930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 23292986 - 23293035
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||||||    
T  23292986 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattat 23293035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 27706160 - 27706217
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||   | |||||||  |||||||||||||||||||||||||||||||||    
T  27706160 cgtgtccgacattaacacgacactcacacttgtaattacactaaattatgtgattttt 27706217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 28964248 - 28964297
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  28964248 cgacacagacacttgtaattacactgaattatgtgattttttcaaattat 28964297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 30299007 - 30298966
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||||||||||||||| |||||||| ||||||    
T  30299007 acgacaccgacacttgtaattacactgaattatgtcattttt 30298966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 30327875 - 30327834
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||||||||||||||| |||||||| ||||||    
T  30327875 acgacaccgacacttgtaattacactgaattatgtcattttt 30327834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 54580023 - 54580072
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattat 54580072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 28084589 - 28084541
Alignment:
Q  34 caccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||| ||||||| |||||||||||||||| | |||||||||||||||    
T  28084589 caccgacacgacacagacacttgtaattacattgaattatgtgattttt 28084541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 49431085 - 49431045
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  49431085 cgacaccgacacttttaattacactgaattatgtgattttt 49431045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 715608 - 715647
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  715608 gacaccaacacttgtaattacactgaattatgtgattttt 715647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 752934 - 752973
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  752934 gacaccaacacttgtaattacactgaattatgtgattttt 752973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 3947760 - 3947815
Alignment:
Q  36 ccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||| ||||||| |||||||||||||||||| ||||||| || |||||||||||||    
T  3947760 ccgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattat 3947815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 12895110 - 12895165
Alignment:
Q  36 ccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||| |||||||||||||||||||||||  | |||||||||| |||||||||||||    
T  12895110 ccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattat 12895165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 30838283 - 30838220
Alignment:
Q  28 gtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||| || |||||||||| |||| ||||||||||||||||| | ||||| |||||||||    
T  30838283 gtccgacactgacacgacaccgatacttataattacactaaattatataattttatcaaattat 30838220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 46083974 - 46084029
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattt 80  Q
    ||||||||| || || ||||||||||||| | ||||||||||| ||||||||||||    
T  46083974 cgtgtccgatactgacacgacaccgacacatataattacactagattatgtgattt 46084029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 50280960 - 50280891
Alignment:
Q  23 cacgtgtccgacaccgatacgacaccgacacttgtaatt--acactaaattatgtg-atttttcaaattat 90  Q
    |||||||||||||| || ||||||||| |||||||||||  ||||| ||||||||| ||||||||||||||    
T  50280960 cacgtgtccgacac-gacacgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattat 50280891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 848027 - 847961
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||| | | |||||||||||||||||||| | | |||||||| ||||| |||||||||    
T  848027 cgtgtccgacaccaacaagacaccgacacttgtaattatagtgaattatgtaattttctcaaattat 847961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 903998 - 903932
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||| |||||||||||| || || || | |||||||||| |||||||||||||| |||||||||    
T  903998 cgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaattat 903932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 8423718 - 8423767
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||| || |||||||||| |||||||||||||| |||||||||    
T  8423718 cgacaccgacatttataattacactgaattatgtgattttctcaaattat 8423767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 19312407 - 19312354
Alignment:
Q  29 tccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||| ||| |||||||||| |||| |||||||||| ||| |||||||||||    
T  19312407 tccgacaacgacacgacaccgatacttataattacactgaatcatgtgattttt 19312354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 19500841 - 19500898
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||| ||||||||  ||| | ||||||||||||| |||||| |||||    
T  19500841 cgtgtccgacaccgacacgacaccatcacatataattacactaaaatatgtgtttttt 19500898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 37203315 - 37203274
Alignment:
Q  50 acacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattat 37203274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 5775359 - 5775407
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||| | |||||||||| |||||||||||||| |||||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttctcaaattat 5775407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 13134510 - 13134470
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    |||||| |||||| | |||||||||||||||||||||||||    
T  13134510 acgacatcgacacatataattacactaaattatgtgatttt 13134470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 28000743 - 28000779
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgatt 79  Q
    |||||||||||||||||||||||| |||||| |||||    
T  28000743 gacaccgacacttgtaattacactgaattatatgatt 28000779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 36409512 - 36409552
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||| | ||||||||||||||||||||| ||||    
T  36409512 cgacaccgacacctataattacactaaattatgtgactttt 36409552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 36423678 - 36423718
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||| | ||||||||||||||||||||| ||||    
T  36423678 cgacaccgacacctataattacactaaattatgtgactttt 36423718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 241670 - 241612
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttttc 83  Q
    ||||||||||||| | ||||||||||||||  |||||||||||||||||||||||||||    
T  241670 cgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttttc 241612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 30717513 - 30717579
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||| ||| |||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  30717513 cgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattat 30717579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 37419819 - 37419753
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |||| ||||| |||||||||||||    
T  37419819 cgtgtccgacaccgacacgacaccggcacttgtaattacactgaattttgtgattttttcaaattat 37419753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 34784965 - 34785021
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    ||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||    
T  34784965 cgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgatttt 34785021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 20539673 - 20539723
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  20539673 acgacaccgacacttgtaattacactaaattatatgattttttcaaattat 20539723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 11223846 - 11223903
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||| | | |||||||||||||||||||||||| |||||||| ||||||    
T  11223846 cgtgtccgacacctacatgacaccgacacttgtaattacactgaattatgttattttt 11223903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 23058433 - 23058482
Alignment:
Q  33 acaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  23058433 acaccgacacgacaccgacacttgtaattacactggattatgtgattttt 23058482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 2438719 - 2438759
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  2438719 cgacaccgacacttgtaattacactgaattatgtgattttt 2438759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 19536397 - 19536437
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgattttt 19536437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 14996224 - 14996263
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  14996224 gacaccgacacttgtaattacactaaattatatgattttt 14996263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 15657937 - 15657874
Alignment:
Q  28 gtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt-caaattat 90  Q
    |||||||| | | |||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  15657937 gtccgacatcaacacgacaccgacatttgtaattacactgaattatgtgatttttacaaattat 15657874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 974807 - 974757
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  974807 acgacaccgacacttgtaattacactgaataatgtgatcttttcaaattat 974757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 26769587 - 26769521
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||| ||||| | ||||||||||||||||||||||| | || ||||||| ||||||||||||    
T  26769587 cgtgtccgataccgacatgacaccgacacttgtaattacaccagataatgtgatattttcaaattat 26769521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 4882679 - 4882736
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||| |||||||| |||||| ||||||||||||||||||| |||||| | ||||||    
T  4882679 cgtgtctgacaccgacacgacatcgacacttgtaattacactgaattatatcattttt 4882736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 18422022 - 18421973
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattat 18421973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 29367337 - 29367382
Alignment:
Q  35 accgatacgacaccgacacttgtaattacactaaattatgtgattt 80  Q
    ||||| |||| ||||||| |||||||||||||||||||||||||||    
T  29367337 accgacacgataccgacatttgtaattacactaaattatgtgattt 29367382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 30335476 - 30335427
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||| |||||||||||||||||||||| | |||||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattat 30335427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 30404850 - 30404899
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||| |||||||||||||||||||| |||||||||| |||||||||||||    
T  30404850 cgacgccgacacttgtaattacactgaattatgtgattttttcaaattat 30404899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 33153484 - 33153443
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  33153484 acgacacggacacttgtaattacactgaattatgtgattttt 33153443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 37559036 - 37558987
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt-caaattat 90  Q
    ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattat 37558987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 5040793 - 5040753
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  5040793 cgacaccgacacttgtaattacattgaattatgtgattttt 5040753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 12668416 - 12668472
Alignment:
Q  35 accgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||| ||||||||||||||| |||||||||| |||||||| | |||||||||||||    
T  12668416 accgacacgacaccgacacttataattacactgaattatgtcattttttcaaattat 12668472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 18255980 - 18256020
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  18255980 cgacaccgacacttctaattacattaaattatgtgattttt 18256020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 18841014 - 18841062
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattat 18841062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 35056944 - 35056896
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattat 73  Q
    ||||||||||||||| ||||||||||||| | |||||||||| ||||||    
T  35056944 cgtgtccgacaccgacacgacaccgacacatataattacactgaattat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 36756343 - 36756393
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgattt-ttcaaattat 90  Q
    ||||||||||||||| |||||||||| |||||||| |||| ||||||||||    
T  36756343 acgacaccgacacttataattacactgaattatgttatttcttcaaattat 36756393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 44860396 - 44860330
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||| ||||| | ||||||||||||| | |||||||||| ||||||| |||||| |||||||||    
T  44860396 cgtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaattat 44860330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 15972932 - 15972883
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||||| |||| ||| | |||||||||||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattat 15972883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 32749811 - 32749864
Alignment:
Q  28 gtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    |||||||| ||| ||||||| ||||||| | |||||||| ||||||||||||||    
T  32749811 gtccgacatcgacacgacactgacacttattattacactgaattatgtgatttt 32749864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 34337165 - 34337225
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||| | ||||||||||||||||||     |||||||||||| |||||||||||||    
T  34337165 gtgtccgacaccgacaggacaccgacacttgtaat-----taaattatgtgattttttcaaattat 34337225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 36409610 - 36409676
Alignment:
Q  23 cacgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||| |||||| | | ||||||||||| |  |||||||||||||||||||| |||||||||||||    
T  36409610 cacgtgtcagacaccaacatgacaccgacacat--aattacactaaattatgtgattttttcaaattat 36409676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 44635557 - 44635520
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatt 79  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  44635557 cgacaccgacacttgtaattacactgaattacgtgatt 44635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 21624326 - 21624294
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatg 74  Q
    ||||||||||||||||||||||||| |||||||    
T  21624326 cgacaccgacacttgtaattacactgaattatg 21624294  T

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Target: scaffold0171 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 23587 - 23530
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||||| ||||||| ||||||| |||||||||| |||||||||||||||    
T  23587 cgtgtccgacaccgaaacgacactgacacttataattacactgaattatgtgattttt 23530  T

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Target: scaffold0171; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 23485 - 23439
Alignment:
Q  36 ccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||    
T  23485 ccgacacgacaccgacacttataattacactgaattatgtgattttt 23439  T

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Target: scaffold0136 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 3832 - 3889
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||||| | ||||||| |||||||||||||||||| |||||||||||||||    
T  3832 cgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgattttt 3889  T

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Target: scaffold0044 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 53254 - 53190
Alignment:
Q  27 tgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||| ||| ||||||||||| |||||||||| |||||||||||||| |||||||||    
T  53254 tgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattat 53190  T

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Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 17750 - 17798
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattat 17798  T

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Target: scaffold0223 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 20239 - 20182
Alignment:
Q  34 caccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||||    
T  20239 caccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattat 20182  T

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Target: scaffold0086 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 3004 - 2947
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||| || ||||| ||||||| || |||||||||||||||||||||||||||||||    
T  3004 cgtgtctgataccgacacgacactgatacttgtaattacactaaattatgtgattttt 2947  T

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Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 23830 - 23789
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  23830 acgacaccgacacttgtaattacactgaattatgtgattttt 23789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 19626 - 19586
Alignment:
Q  50 acacttgtaattacactaaattatgtgatttttcaaattat 90  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  19626 acacttgtaattacactgaattatgtgatttttcaaattat 19586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 25767 - 25807
Alignment:
Q  41 acgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  25767 acgacaccgacacttataattacactaaattatgtgatttt 25807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 71800 - 71744
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||| ||||||| |||||| ||||||||||| |||| ||||||||||    
T  71800 gtgtccgacaccgacacgacactgacactagtaattacactgaattgtgtgattttt 71744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 83238 - 83179
Alignment:
Q  23 cacgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    ||||||||||| | | |||||||||||||| ||||||||||||| |||||||| ||||||    
T  83238 cacgtgtccgatatcaatacgacaccgacatttgtaattacactgaattatgtcattttt 83179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 123686 - 123650
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgatt 79  Q
    |||||||||||||||||||||||| ||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgatt 123650  T

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Target: scaffold0450 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 8618 - 8684
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||| ||||| |||||||||||| ||||||||| ||  ||||||||||| ||||||||||||    
T  8618 cgtgtccgataccgacacgacaccgacatttgtaattataccgaattatgtgatattttcaaattat 8684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 462 - 511
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  462 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattat 511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 8857 - 8808
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||||||||||||||||||||||||| || ||| |||||||||||||    
T  8857 cgacaccgacacttgtaattacactaaataatatgattttttcaaattat 8808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 46741 - 46692
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattat 46692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 68226 - 68291
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||| ||||||||||||||||| ||||| | |||||| |||||||||| ||||||| |||||||||    
T  68226 gtgttcgacaccgatacgacactgacacctataattatactaaattatatgattttctcaaattat 68291  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 130538 - 130501
Alignment:
Q  45 caccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||||||||||| |||||||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttt 130501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 5979 - 6035
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    ||||| ||||||||||||||||||||||| | ||||||||||  ||| |||||||||    
T  5979 cgtgttcgacaccgatacgacaccgacacatataattacactgcattttgtgatttt 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 24099 - 24044
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||||||||||| ||||||| || ||| ||||||||||||||||||| |||||||    
T  24099 gtgtccgacaccgacacgacactgaaact-gtaattacactaaattatgagattttt 24044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 4884 - 4923
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgattttt 82  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  4884 gacaccaacacttgtaattacactgaattatgtgattttt 4923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 44509 - 44564
Alignment:
Q  26 gtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 81  Q
    |||||| ||||||| |||| |||||||| | |||||||||| ||||||||||||||    
T  44509 gtgtccaacaccgacacgataccgacacatataattacactgaattatgtgatttt 44564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 9730 - 9796
Alignment:
Q  25 cgtgtccgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||| |||||| | ||||||||||||| | |||||||||| ||||| |||||||| |||||||||    
T  9730 cgtgtctgacaccaacacgacaccgacacatataattacactgaattaagtgattttctcaaattat 9796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 7032 - 7081
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    ||||||| ||||||||||||| |||||||||||| | |||||||||||||    
T  7032 cgacacctacacttgtaattatactaaattatgtaattttttcaaattat 7081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 13459 - 13410
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||| ||||||||| |||| |||||||||||||| |||||||||    
T  13459 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattat 13410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 7319 - 7352
Alignment:
Q  50 acacttgtaattacactaaattatgtgatttttc 83  Q
    |||||| |||||||||||||||||||||||||||    
T  7319 acacttataattacactaaattatgtgatttttc 7352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 21868 - 21917
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    |||||||||| ||||||||| |||| |||||||||||||| |||||||||    
T  21868 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattat 21917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 51862 - 51821
Alignment:
Q  50 acacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattat 51821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 45530 - 45563
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgt 75  Q
    ||||||||||||||||||||||||| ||||||||    
T  45530 cgacaccgacacttgtaattacactgaattatgt 45563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 70337 - 70288
Alignment:
Q  42 cgacaccgacacttgtaattacactaaattatgtga-tttttcaaattat 90  Q
    |||||||||||||| |||||||||| |||||||| | |||||||||||||    
T  70337 cgacaccgacacttataattacactgaattatgttattttttcaaattat 70288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 14580 - 14540
Alignment:
Q  51 cacttgtaattacactaaattatgtgat-ttttcaaattat 90  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattat 14540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 63831 - 63783
Alignment:
Q  43 gacaccgacacttgtaattacactaaattatgtgatttt-tcaaattat 90  Q
    ||||||||||||||||||| |||| |||||||| ||||| |||||||||    
T  63831 gacaccgacacttgtaattgcactgaattatgtaattttctcaaattat 63783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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