View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10528_low_9 (Length: 243)
Name: NF10528_low_9
Description: NF10528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10528_low_9 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 19 - 243
Target Start/End: Original strand, 49513873 - 49514097
Alignment:
| Q |
19 |
gatgaggtgcttgtgtgcttgggaaacgtacaaatttggttacgtttgaattgaaccaaatataaataatgcatagtatatatgattaaaaacaaacaaa |
118 |
Q |
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| T |
49513873 |
gatgaggtgcttgtgtgcttgggaaacgtacaaatttggttacttttgaattgaaccaaatataaataatgcatagtatatatgattaaaaacaaacaaa |
49513972 |
T |
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| Q |
119 |
cataaagtatgcttaaatctaaatattattcagctacacgtttgcacgatgaagccgctgcctacactcaaatgttgtcatctttgatttgaaattaact |
218 |
Q |
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| T |
49513973 |
cataaagtatgcttaaatctaaatattattcagctacacgtttgcacgatgaagccgctgcctacactcaaatgttgtcatctttgatttgaaattaact |
49514072 |
T |
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| Q |
219 |
tgtagggcttgtagttgatgctgac |
243 |
Q |
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| T |
49514073 |
tgtagggcttgtagttgatgctgac |
49514097 |
T |
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