View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10530_low_4 (Length: 251)
Name: NF10530_low_4
Description: NF10530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10530_low_4 |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 3 - 244
Target Start/End: Original strand, 7546078 - 7546319
Alignment:
| Q |
3 |
caaaaacaagattccatgtgaatgtgtgattttttattaatgagtttctctctcttttaaaaaaggggttttaataccataatagcaatgtttattaatc |
102 |
Q |
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| T |
7546078 |
caaaaacaagattccatgtgaatttgtgattttttattaatgagtttctctctcttttaaaaaaggggttttaataccataatagcaatgtttgttaatc |
7546177 |
T |
|
| Q |
103 |
tttcatacactaaaaattgtattaataaaagccttcatttcttaaaaaatggagaaaaatctcacnnnnnnnattgaagctaatctaaacgtttatcatt |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
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| T |
7546178 |
tttcatacactaaaaattgtattaataaaagccttcatttcttaaaaaatggagaaaaatctcactttttttattgcagctaatctaaacgtttatcatt |
7546277 |
T |
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| Q |
203 |
tcttctttacttagcaacgatgccctccaaaagcctatgctt |
244 |
Q |
| |
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|||||||| ||||||||||||||||||||||||||||||||| |
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| T |
7546278 |
tcttctttgcttagcaacgatgccctccaaaagcctatgctt |
7546319 |
T |
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