View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10530_low_7 (Length: 241)
Name: NF10530_low_7
Description: NF10530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10530_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 3706313 - 3706529
Alignment:
| Q |
1 |
ccattcccacgttgcctgcgccgataactgagatcttgttgtggcgtttggttggagaaggaggtgaggcatgttggatggacttgaagaaggattgagt |
100 |
Q |
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| T |
3706313 |
ccattcccacgttgcctgcgccgataactgagatcttgttgtggcgtttggttggagaaggaggtgaggcatgttggatggacttgaagaaggattgagt |
3706412 |
T |
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| Q |
101 |
taggtccaaaccacctggtcccaatgatgaacctgatatgcttttgtgcatttggatttgcttgtgctgatttgagtaaaggtaaatgcgaagtgtgtga |
200 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
3706413 |
taggtccaaaccatctggtcccaatgatgaacctgatatgcttttgtgcattttgatttgcttgtgctgatttgagtaaaggtaaatgtgaagtgtgtga |
3706512 |
T |
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| Q |
201 |
tgggaaaatttgatttg |
217 |
Q |
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||||||||||||||||| |
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| T |
3706513 |
tgggaaaatttgatttg |
3706529 |
T |
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