View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10531_low_3 (Length: 304)
Name: NF10531_low_3
Description: NF10531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10531_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 12 - 286
Target Start/End: Complemental strand, 37659791 - 37659517
Alignment:
| Q |
12 |
acagacagaatgctatggatcctggtagcttgaattttgctacatctgaacctcgaatccagttatatttcatgctggggcatgtctatgctccagtcac |
111 |
Q |
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| T |
37659791 |
acagacagaatgctatggatcctggtagcttgaattttgctacatctgaacctcgaatccagttatatttcatgctggggcatgtctatgctccagtcac |
37659692 |
T |
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| Q |
112 |
acctttacttcttcccttcatcgtagtcttctttgctttttcctacatggtctatcggcaccaggtgagttctgaatagagtatgttgcatattttgttc |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
37659691 |
acctttacttcttcccttcatcgtagtcttctttgctttttcctacatggtctatcggcaccaggtgagttctgaatagagtatgttacatattttgttc |
37659592 |
T |
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| Q |
212 |
cttatgataaatgcatatctaaacaagaaataaagatgaatcatatgaccgaactgacatttagtatactgcttt |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37659591 |
cttatgataaatgcatatctaaacaagaaataaagatgaatcatatgaccgaactgacatttagtatactgcttt |
37659517 |
T |
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