View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10531_low_5 (Length: 270)
Name: NF10531_low_5
Description: NF10531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10531_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 7009143 - 7009383
Alignment:
| Q |
16 |
cagagacactatggtattgttaccacgaatggtctctggccatctccagcatcagattcagttgatttgtcggcatataagcttagatttggagactttg |
115 |
Q |
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| T |
7009143 |
cagagacactatggtattgttaccatgaatggtctctggccatctccgggatcagattcagttgatttgtcggcatataagcttagatttggagactttg |
7009242 |
T |
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| Q |
116 |
tccatgctttcttgtcggtggttgtgttcgcggtgctgggactgcttgacactaatgttgtgcattgcttttacccgaaatttgagtcgtctgagaagat |
215 |
Q |
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| T |
7009243 |
tccatgctttcttgtcggtgattgtgttcgcggtgctgggactgcttgacactaatgttgtgcattgcttttacccgaaatttgagtcgtctgagaagat |
7009342 |
T |
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| Q |
216 |
tctcatgcaggtgttaccaccggttattggggtggtctctg |
256 |
Q |
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|||||||||||||||||||||||||||||||||||| |||| |
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| T |
7009343 |
tctcatgcaggtgttaccaccggttattggggtggtttctg |
7009383 |
T |
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