View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10531_low_6 (Length: 267)
Name: NF10531_low_6
Description: NF10531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10531_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 25 - 257
Target Start/End: Original strand, 37442370 - 37442602
Alignment:
| Q |
25 |
cttcatatattacactttggaagcatattttttgagcagtatgagtgtataggtttaatattgatgatgatgatgagaatatagttttattcnnnnnnng |
124 |
Q |
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| T |
37442370 |
cttcatatattacactttggaagcatattttttgagcagtatgagtatataggtttaatattgatgatgatgatgagaatatagttttattctttttttg |
37442469 |
T |
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| Q |
125 |
gtgaagtcttatgcatgatgaggttttaggtatatgtagtgaatgaatcttcgatcttgaatatattggtcagctttttgtttaggtaatggatgtgttt |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37442470 |
gtgaagtcttatgcatgatgaggttttaggtatatgtagtgaatgaatcttcgatcttgaatatattggtcagctttttgtttaggtaatggatgtgttt |
37442569 |
T |
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| Q |
225 |
gttagcatgcttcatttgtcttctgagcctttg |
257 |
Q |
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|||||||||||||||||||||||||||| |||| |
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| T |
37442570 |
gttagcatgcttcatttgtcttctgagcttttg |
37442602 |
T |
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