View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10532_low_4 (Length: 267)

Name: NF10532_low_4
Description: NF10532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10532_low_4
NF10532_low_4
[»] chr2 (9 HSPs)
chr2 (19-252)||(16657638-16657871)
chr2 (50-251)||(7542071-7542272)
chr2 (31-223)||(43625238-43625430)
chr2 (31-241)||(14703234-14703444)
chr2 (31-256)||(12234515-12234740)
chr2 (31-236)||(12258718-12258923)
chr2 (33-256)||(16662109-16662332)
chr2 (33-219)||(11999235-11999421)
chr2 (33-219)||(12245560-12245746)
[»] chr7 (25 HSPs)
chr7 (31-252)||(8659189-8659410)
chr7 (19-252)||(10494495-10494728)
chr7 (19-252)||(8654264-8654497)
chr7 (31-252)||(1301286-1301507)
chr7 (19-252)||(13333577-13333810)
chr7 (49-252)||(8667263-8667466)
chr7 (30-242)||(27831006-27831218)
chr7 (24-252)||(3147083-3147311)
chr7 (31-231)||(17267765-17267965)
chr7 (31-241)||(17260067-17260277)
chr7 (32-252)||(8646704-8646924)
chr7 (31-223)||(6789338-6789530)
chr7 (31-224)||(8585855-8586048)
chr7 (33-113)||(8616509-8616589)
chr7 (42-229)||(8570148-8570335)
chr7 (31-98)||(8673896-8673963)
chr7 (172-254)||(7877852-7877934)
chr7 (172-219)||(8545600-8545647)
chr7 (172-254)||(29581960-29582042)
chr7 (172-212)||(8609884-8609924)
chr7 (64-122)||(8664919-8664977)
chr7 (172-254)||(29577791-29577873)
chr7 (172-233)||(8576293-8576354)
chr7 (42-122)||(8576163-8576243)
chr7 (67-127)||(8609779-8609839)
[»] chr1 (4 HSPs)
chr1 (19-252)||(4678679-4678911)
chr1 (31-252)||(15594860-15595081)
chr1 (69-221)||(34466945-34467089)
chr1 (40-121)||(52549264-52549345)
[»] chr4 (3 HSPs)
chr4 (19-217)||(9336047-9336245)
chr4 (31-252)||(30775078-30775299)
chr4 (30-143)||(35132282-35132395)
[»] chr5 (1 HSPs)
chr5 (38-252)||(28219751-28219965)
[»] chr8 (1 HSPs)
chr8 (31-252)||(43744642-43744863)


Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 16657871 - 16657638
Alignment:
Q  19 tttgaatcaccgagacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagt 118  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16657871 tttgaatcacgaagacaattctcaacagttttcatacactcattgaaaagatccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagt 16657772  T
Q  119 caattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggc 218  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16657771 caattccctgaaataaagaatctacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggc 16657672  T
Q  219 tcttggattcccacttatgtccaccttattcttc 252  Q
    |||||  |||||||||||||||||||||||||||    
T  16657671 tcttgagttcccacttatgtccaccttattcttc 16657638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 7542071 - 7542272
Alignment:
Q  50 tcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaaataaagaatctacctctac 149  Q
    |||||||||| || ||||| |||||||| || |||||||||||||| |   |||| ||||||||||||||||| || |||||||||||||||||||| |     
T  7542071 tcatacactcgttaaaaagatccatattcatctcctcaaacttggccctattgatcgatgaagaaaagtcaatgccttgaaataaagaatctacctcaat 7542170  T
Q  150 agtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattc 249  Q
    |||||  |||| |   ||||| ||||  || |||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||| || |||    
T  7542171 agtggcaacaacaaggaaagaaagtgatctttttgccctctcacaagcagttctcaacctcctcaaggcttttggattcccactaatgtccactttgttc 7542270  T
Q  250 tt 251  Q
    ||    
T  7542271 tt 7542272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 223
Target Start/End: Original strand, 43625238 - 43625430
Alignment:
Q  31 agacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaa 130  Q
    |||||| ||| ||||||||||| |||||| |||||||| |||||||| ||||| ||||| |||||||| |||||||||||| | |||||||| ||  | |    
T  43625238 agacaactcttaacagttttcaaacactcgttgaaaagatccatatttatttcatcaaatttggcacgagtgattgatgaaaagaagtcaataccacgga 43625337  T
Q  131 ataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttg 223  Q
    |||||||||||||||| | |||| |||   |||||||||| |||||||| ||| | ||||| ||||| ||||||||||| || | ||||||||    
T  43625338 ataaagaatctacctcaatagtgctgaacgaagcaaaagacagtgtcctttttcctctctcgcatgccgttctcaaccttcttatggctcttg 43625430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 241
Target Start/End: Original strand, 14703234 - 14703444
Alignment:
Q  31 agacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaa 130  Q
    |||||| |||||||| | |||| ||||||||| |||| ||||||||| ||||| ||||||||||| |   |||| ||||||||||||||||| |  ||||    
T  14703234 agacaactctcaacaatcttcacacactcattaaaaaagtccatattcatttcttcaaacttggccctattgatcgatgaagaaaagtcaatgcattgaa 14703333  T
Q  131 ataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattccc 230  Q
    |||||| ||||||||| | ||||| |||||     ||||| ||||| || ||||||||||| || || |||||||| ||||| |||||| ||||||| ||    
T  14703334 ataaagcatctacctcaatagtggcgacaacttggaaagaaagtgttctttttgccctctcgcaagcggttctcaagctccttaaggcttttggatttcc 14703433  T
Q  231 acttatgtcca 241  Q
    ||| |||||||    
T  14703434 actaatgtcca 14703444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 256
Target Start/End: Original strand, 12234515 - 12234740
Alignment:
Q  31 agacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaa 130  Q
    |||||| |||||||| | |||||||||||| | | ||| |||||||| ||||||||||||||||| |   |||| ||||||||||| ||||| || | ||    
T  12234515 agacaactctcaacaatcttcatacactcaataagaagatccatattcatttcctcaaacttggccctattgatcgatgaagaaaaatcaatgccttcaa 12234614  T
Q  131 ataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattccc 230  Q
    |||||||||||||||| |  || |  |||| |   ||||| | ||  || |||||||||||||| |||||||| ||||||||||||||| ||||||| ||    
T  12234615 ataaagaatctacctcaatggttgcaacaacaaggaaagacaatgatctttttgccctctcacaagcagttcttaacctcctcaaggcttttggatttcc 12234714  T
Q  231 acttatgtccaccttattcttcctat 256  Q
    ||| |||||||| || ||||| ||||    
T  12234715 actcatgtccacttttttctttctat 12234740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 12258923 - 12258718
Alignment:
Q  31 agacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaa 130  Q
    |||||| |||||||||| ||||| || ||||||||||| |||| ||| ||||||||||||||||||||  ||||||||| |||||| ||||| || | |     
T  12258923 agacaactctcaacagtcttcatgcattcattgaaaagttccaaatttatttcctcaaacttggcacgattgattgatgcagaaaaatcaatgccatcac 12258824  T
Q  131 ataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattccc 230  Q
    |||||||||||| ||| | ||| |  |||| |  | |||| ||||  || ||||| |||||||| || ||| |||| |||||||| ||||||||||| ||    
T  12258823 ataaagaatctatctcaatagttgcaacaacaagataagaaagtgatctttttgcactctcacaagctgttttcaatctcctcaaagctcttggatttcc 12258724  T
Q  231 acttat 236  Q
    ||||||    
T  12258723 acttat 12258718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 256
Target Start/End: Complemental strand, 16662332 - 16662109
Alignment:
Q  33 acaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaaat 132  Q
    |||| |||||||| | ||||||||||| || |||||| ||||||| ||||| ||||||||| |||| |||| ||||| ||| ||||||||  |||   ||    
T  16662332 acaactctcaacaatcttcatacactcgttaaaaaggcccatattgatttcttcaaacttgacacgagtgagtgatgtagagaagtcaatgtcctcgtat 16662233  T
Q  133 aaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccac 232  Q
    ||| |||| | ||| | || |||||| ||    |||||||||||||| || ||| | ||||| | |||||||||||||||||||||||||||||||| |     
T  16662232 aaataatcaatctcaatagcggtgaccaatttgaaagagagtgtccttttcgccttttcacaagaagttctcaacctcctcaaggctcttggattcctag 16662133  T
Q  233 ttatgtccaccttattcttcctat 256  Q
    | || ||||| || ||||||||||    
T  16662132 tgatatccactttgttcttcctat 16662109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 11999235 - 11999421
Alignment:
Q  33 acaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaaat 132  Q
    |||| |||||||||| || ||||| ||||| | ||| || | ||| | |||||||||||| || ||  |||| ||||||||||| ||||| || ||||||    
T  11999235 acaactctcaacagtctttatacaatcattaagaagatctaaattcaattcctcaaactttgcccgattgatggatgaagaaaaatcaatgccttgaaat 11999334  T
Q  133 aaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggct 219  Q
    |||||||||||||| | ||| |  |||| |  ||| || ||| | || |||||||||||||| ||||||||||||||||||||||||    
T  11999335 aaagaatctacctcaatagttgcaacaacaagaaatgatagtattctttttgccctctcacaagcagttctcaacctcctcaaggct 11999421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 12245746 - 12245560
Alignment:
Q  33 acaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaaat 132  Q
    |||| |||||||||| || ||||| ||||| | ||| || | ||| | |||||||||||| || ||  |||| ||||||||||| ||||| || ||||||    
T  12245746 acaactctcaacagtctttatacaatcattaagaagatctaaattcaattcctcaaactttgcccgattgatggatgaagaaaaatcaatgccttgaaat 12245647  T
Q  133 aaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggct 219  Q
    |||||||||||||| | ||| |  |||| |  ||| || ||| | || |||||||||||||| ||||||||||| ||||||||||||    
T  12245646 aaagaatctacctcaatagttgcaacaacaagaaacgaaagtattctttttgccctctcacaagcagttctcaatctcctcaaggct 12245560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 1e-74; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 31 - 252
Target Start/End: Original strand, 8659189 - 8659410
Alignment:
Q  31 agacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaa 130  Q
    |||||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||| |||||| ||||| | ||||| ||||||||||    
T  8659189 agacaactctcaacagttttcatacactcattaaaaagatccatattcatttcctcaaacctggcacgagtgattaatgaacagaagtctattccctgaa 8659288  T
Q  131 ataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattccc 230  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | |||| || ||    
T  8659289 ataaagaatcgacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacaggcagttctcaacctccttaaggattttgggttacc 8659388  T
Q  231 acttatgtccaccttattcttc 252  Q
    ||| |||||||| |||||||||    
T  8659389 actaatgtccactttattcttc 8659410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 10494728 - 10494495
Alignment:
Q  19 tttgaatcaccgagacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagt 118  Q
    |||||||| | ||||||| | |||||| | |||||||||||  |||||| ||| ||||||||||||||||| |||||||| |||||||||||||||||||    
T  10494728 tttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagt 10494629  T
Q  119 caattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggc 218  Q
    | ||||||  |||||||| ||| ||||| || ||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||||||||| ||||     
T  10494628 cgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaagga 10494529  T
Q  219 tcttggattcccacttatgtccaccttattcttc 252  Q
    | ||||||||||||| |||||||| |||||||||    
T  10494528 ttttggattcccactgatgtccacgttattcttc 10494495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 252
Target Start/End: Original strand, 8654264 - 8654497
Alignment:
Q  19 tttgaatcaccgagacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagt 118  Q
    |||||||| | ||||||| | |||||| | || |||||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||||||||||    
T  8654264 tttgaatctctgagacaactgtcaacaatattgatacactcattgaaaaagtccatattaatttcctcaaatttagcacgagtgattgatgaagaaaagt 8654363  T
Q  119 caattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggc 218  Q
    | ||||||  |||||||| ||||||||| |||||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||||||||| ||||     
T  8654364 cgattcccataaataaagcatctacctcaacagtggtgacaaaagtaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaagga 8654463  T
Q  219 tcttggattcccacttatgtccaccttattcttc 252  Q
    | |||| || || || || ||||| |||||||||    
T  8654464 ttttgggttaccgctaatttccactttattcttc 8654497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 31 - 252
Target Start/End: Original strand, 1301286 - 1301507
Alignment:
Q  31 agacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaa 130  Q
    |||||| ||||||| |||||  |||||||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||| ||||||||||    
T  1301286 agacaactctcaacggtttttgtacactcattaaaaagatccatattaatttcctcaaacttggcacgagtgattaatgaacagaagtcgattccctgaa 1301385  T
Q  131 ataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattccc 230  Q
    |||||||||| ||||| || |||||||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||| |||| | |  | || ||    
T  1301386 ataaagaatcgacctcaacggtggtgactaaagcaaaagagagtgtcctttttgccctctcacacgcaattctcaacctccttaaggatttctggttacc 1301485  T
Q  231 acttatgtccaccttattcttc 252  Q
    ||| |||||||| |||||||||    
T  1301486 actaatgtccactttattcttc 1301507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 13333810 - 13333577
Alignment:
Q  19 tttgaatcaccgagacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagt 118  Q
    |||||||| | ||||||| | |||||| | |||||||||||  |||||| ||| ||||||||||||||||| |||||||| |||||||||||||||||||    
T  13333810 tttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagt 13333711  T
Q  119 caattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggc 218  Q
    | ||||||  |||||||| |||||| || |||||||||||||||| ||| |||||| |||| ||| |||||||||| ||||||||||||||||| ||||     
T  13333710 cgattcccataaataaagcatctacttcaacagtggtgacaaaagaaaaggagagtatccttttttccctctcacaggcagttctcaacctccttaagga 13333611  T
Q  219 tcttggattcccacttatgtccaccttattcttc 252  Q
    | |||| |||||||| || || || |||||||||    
T  13333610 ttttgggttcccactgatatcgacgttattcttc 13333577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 49 - 252
Target Start/End: Original strand, 8667263 - 8667466
Alignment:
Q  49 ttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaaataaagaatctacctcta 148  Q
    ||||||||||||||||||| |||||| |||| ||||||||| || ||||| || ||||||||| ||||||| ||||||  |||||||| ||||||||| |    
T  8667263 ttcatacactcattgaaaaagtccatgttaagttcctcaaatttagcacgagtaattgatgaacaaaagtcgattcccgtaaataaagcatctacctcaa 8667362  T
Q  149 cagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttatt 248  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||| |||| | |||| |||  ||| |||||||| |||||    
T  8667363 cagtggtaacaaaagcaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttctgactgatgtccactttatt 8667462  T
Q  249 cttc 252  Q
    ||||    
T  8667463 cttc 8667466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 30 - 242
Target Start/End: Complemental strand, 27831218 - 27831006
Alignment:
Q  30 gagacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctga 129  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||| |||||||||||||| ||||| |||||   |||| | |||||||| |||| |    
T  27831218 gagacaactctcaacagtctccatacattcattgaaaaggtccatattgatttcctcaaactttgcacgagtgatcattgaaaagaagtcaatgccctca 27831119  T
Q  130 aataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcc 229  Q
    ||||| | ||||| ||| | ||| ||| ||| || ||||||||||||||| |||||| ||||||||   ||||||| |||||||||||||||||| ||||    
T  27831118 aataaggcatctatctcaatagtagtgtcaacagaaaaagagagtgtcctttttgccttctcacattaggttctcagcctcctcaaggctcttgggttcc 27831019  T
Q  230 cacttatgtccac 242  Q
    |||| ||||||||    
T  27831018 cactaatgtccac 27831006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 252
Target Start/End: Original strand, 3147083 - 3147311
Alignment:
Q  24 atcaccgagacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaatt 123  Q
    |||| ||| |||| ||| |||||||| || ||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||| | ||||||| |    
T  3147083 atcagcgaaacaactcttaacagtttccaaacactcagtgaaaagatccatattgatttcctcaaacttggcacgagtgattgatgaaaataagtcaaat 3147182  T
Q  124 ccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttg 223  Q
    ||||||||||||||||||| ||| |  |||||||  | ||||||||| ||| | |  ||||| || ||||| || ||| |||||||||| ||||||||||    
T  3147183 ccctgaaataaagaatctatctcaatggtggtgatgacagcaaaagatagtattcgttttgctctttcacacgccgttttcaacctccttaaggctcttg 3147282  T
Q  224 gattcccacttatgtccaccttattcttc 252  Q
      ||| |||| ||||| ||||| ||||||    
T  3147283 agttctcactaatgtctaccttgttcttc 3147311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 231
Target Start/End: Original strand, 17267765 - 17267965
Alignment:
Q  31 agacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaa 130  Q
    ||||| ||||||||| | | ||| |||||||  |||||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||  |||| ||    
T  17267765 agacacttctcaacaatctccatgcactcatcaaaaaggtccatattgatttcctcaaacttggcacgagtgattgacgaagaaaaatcaacacccttaa 17267864  T
Q  131 ataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattccc 230  Q
    ||||||  |||||||| ||| |||| ||| | || ||||| |||||||| |||||  | ||||||||||||||||||||||||| |||| |||| |||||    
T  17267865 ataaagcgtctacctcaacattggtcacagaggcgaaagaaagtgtcctttttgctttttcacatgcagttctcaacctcctcatggcttttgggttccc 17267964  T
Q  231 a 231  Q
    |    
T  17267965 a 17267965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 241
Target Start/End: Original strand, 17260067 - 17260277
Alignment:
Q  31 agacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaa 130  Q
    ||||| ||||||||| | | ||| |||||||  |||||||||||||| ||||| |||||||||||||| |||||||| |||||||| | ||  |||| ||    
T  17260067 agacacttctcaacaatctccatgcactcataaaaaaggtccatattgatttcttcaaacttggcacgagtgattgacgaagaaaaattaacacccttaa 17260166  T
Q  131 ataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattccc 230  Q
    ||||||  |||||||| ||| |||| ||| | |||||||| |||||||| |||||  | ||||||||||||||||||||||| |||||| |||| |||||    
T  17260167 ataaagcgtctacctcaacattggtcacagaggcaaaagaaagtgtcctttttgctttttcacatgcagttctcaacctccttaaggcttttgggttccc 17260266  T
Q  231 acttatgtcca 241  Q
    | | |||||||    
T  17260267 aataatgtcca 17260277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 252
Target Start/End: Original strand, 8646704 - 8646924
Alignment:
Q  32 gacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaaa 131  Q
    ||||| |||||||||||| || ||| ||  |||| || |||||||| ||| | ||||| |||||||| ||||||||||||  ||||||||| || | |||    
T  8646704 gacaactctcaacagtttccaaacattcgatgaacagatccatattgattgcgtcaaatttggcacgagtgattgatgaaataaagtcaatgccattaaa 8646803  T
Q  132 taaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattccca 231  Q
    |||||||||||  || |  ||||||  | |||||||||| |||||||| ||||| ||||| ||||| |||||||||||||| ||||||||||  || |||    
T  8646804 taaagaatctaattcaatggtggtgcaagaagcaaaagatagtgtcctttttgctctctcgcatgccgttctcaacctccttaaggctcttgagtttcca 8646903  T
Q  232 cttatgtccaccttattcttc 252  Q
     | ||||||||||| ||||||    
T  8646904 gtaatgtccaccttgttcttc 8646924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 223
Target Start/End: Original strand, 6789338 - 6789530
Alignment:
Q  31 agacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaa 130  Q
    |||||| ||||||| || |||||||||||||| ||||  |||||||| ||||||||||||||||| || || | |||||||   ||||| || |||||||    
T  6789338 agacaactctcaacggtcttcatacactcattaaaaatatccatattgatttcctcaaacttggcccgagtaagtgatgaaatgaagtcgatgccctgaa 6789437  T
Q  131 ataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttg 223  Q
    ||||||| |||||||| | ||| ||||| | | |||||||||||  ||| || ||||| ||||| |||||||||||||| || ||||| ||||    
T  6789438 ataaagagtctacctcaatagtagtgacgacaacaaaagagagtacccttttggccctttcacacgcagttctcaaccttcttaaggcccttg 6789530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 224
Target Start/End: Complemental strand, 8586048 - 8585855
Alignment:
Q  31 agacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaa 130  Q
    |||||| |||||||||| || ||||||||||| |||||||||||||| ||||||||||||||| |||| |||||||||||||| || || |  |||| |     
T  8586048 agacaactctcaacagtatttatacactcattaaaaaggtccatattgatttcctcaaacttgacacgcgtgattgatgaagagaaatcgacgccctcac 8585949  T
Q  131 ataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttgg 224  Q
    ||||| |||| |  || | ||| ||||| ||    ||||| |||||||| |||||| | |||||||| ||||| |||| |||||| ||||||||    
T  8585948 ataaataatcaatttcaatagtagtgaccaatttgaaagaaagtgtcctttttgccttttcacatgccgttcttaaccgcctcaaagctcttgg 8585855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 8616509 - 8616589
Alignment:
Q  33 acaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaaga 113  Q
    |||| |||||||||| || |||||||| || |||||||||||||| ||||||||||||||  |||| ||||||||||||||    
T  8616509 acaactctcaacagtctttatacactcgttaaaaaggtccatattgatttcctcaaacttaacacgagtgattgatgaaga 8616589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 8570148 - 8570335
Alignment:
Q  42 aacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaaataaagaatct 141  Q
    |||||||| ||||||||  |  || |||| |||||| ||||||||||||||||| ||||| |||||||||   ||||||||||||| | ||| || ||||    
T  8570148 aacagtttccatacacttttcaaagaggttcatattcatttcctcaaacttggcccgggttattgatgaactgaagtcaattcccttatatatagcatct 8570247  T
Q  142 acctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcc 229  Q
    | ||| |  ||||   ||  | || | || |||||||| |||||||||||||| || ||||| ||||||||||||||| |||| ||||    
T  8570248 agctcaattgtggcctcagtatcatatgaaagtgtcctttttgccctctcacaagctgttcttaacctcctcaaggcttttgggttcc 8570335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 8673963 - 8673896
Alignment:
Q  31 agacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacg 98  Q
    ||||||||||||||||||| || |||||| |||||||| |  ||||| ||||||||||||||||||||    
T  8673963 agacaattctcaacagtttccaaacactcgttgaaaagattgatattgatttcctcaaacttggcacg 8673896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 7877934 - 7877852
Alignment:
Q  172 agtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcct 254  Q
    |||||||| || ||||||||||||||||||||||||||||| | ||| || || || ||||  |||||||| |||||||||||    
T  7877934 agtgtccttttagccctctcacatgcagttctcaacctcctaagggccctcgggtttccaccaatgtccactttattcttcct 7877852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 8545600 - 8545647
Alignment:
Q  172 agtgtcctctttgccctctcacatgcagttctcaacctcctcaaggct 219  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  8545600 agtgtcctttttgccttctcacaggcagttctcaacctcctcaaggct 8545647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 29582042 - 29581960
Alignment:
Q  172 agtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcct 254  Q
    ||||||||||||||||||||||| || ||||||| | |||| || ||| |||| |||||||| |||||||  || ||||||||    
T  29582042 agtgtcctctttgccctctcacaagctgttctcagcttccttaaagcttttgggttcccactaatgtccaaattgttcttcct 29581960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 8609884 - 8609924
Alignment:
Q  172 agtgtcctctttgccctctcacatgcagttctcaacctcct 212  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  8609884 agtgtcctctttgccctctcacaagcagtcctcaacctcct 8609924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 8664919 - 8664977
Alignment:
Q  64 aaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaat 122  Q
    |||||||||||||| |||||||||||| | ||||| || ||||||||| |||| |||||    
T  8664919 aaaaggtccatattgatttcctcaaacctcgcacgagttattgatgaacaaaattcaat 8664977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 29577873 - 29577791
Alignment:
Q  172 agtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcct 254  Q
    |||| |||||||||||||||||| |||||||||| | |||| || ||| |||| |||  ||| |||||||| || ||||||||    
T  29577873 agtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcct 29577791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 8576293 - 8576354
Alignment:
Q  172 agtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccact 233  Q
    |||||||| |||||| | ||||| ||||||||||||||||| |||||| ||| |||| ||||    
T  8576293 agtgtcctttttgccttttcacaagcagttctcaacctccttaaggcttttgaattctcact 8576354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 8576163 - 8576243
Alignment:
Q  42 aacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaat 122  Q
    |||||| ||||||||||  |  || |||| |||||| ||||||||||||||||| ||||| ||||| ||| | ||||||||    
T  8576163 aacagtattcatacacttttcaaagaggttcatattcatttcctcaaacttggcccgggttattgaggaacagaagtcaat 8576243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 8609779 - 8609839
Alignment:
Q  67 aggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccct 127  Q
    |||||||| |||| || ||||||||| ||||| |||||||||||| |||| ||||| ||||    
T  8609779 aggtccatgttaagttgctcaaacttcgcacgagtgattgatgaacaaaaatcaataccct 8609839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 4678911 - 4678679
Alignment:
Q  19 tttgaatcaccgagacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagt 118  Q
    ||||||||||  |||||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| || || |||||||||||||    
T  4678911 tttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagt 4678812  T
Q  119 caattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggc 218  Q
    | |||||||||||||||||||||| ||| |||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||||| ||||     
T  4678811 ctattccctgaaataaagaatcta-ctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccttaaggg 4678713  T
Q  219 tcttggattcccacttatgtccaccttattcttc 252  Q
    | |||  |||  ||| |||||||| |||||||||    
T  4678712 ttttgcgttcttactaatgtccacattattcttc 4678679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 252
Target Start/End: Original strand, 15594860 - 15595081
Alignment:
Q  31 agacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaa 130  Q
    |||||| |||||||  | |||||||| || || |||| |||||| || ||||| |||||||||| ||| || |  |||||| | |||||||| || | ||    
T  15594860 agacaactctcaactatcttcatacaatccttaaaaaagtccatgttgatttcttcaaacttggaacgagtaaccgatgaaaagaagtcaataccgttaa 15594959  T
Q  131 ataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattccc 230  Q
    ||||| |||||||||| |  || ||||||  || ||||||||||  ||| |||||||| || || ||||||||||| ||||||||||| ||||| |||||    
T  15594960 ataaacaatctacctcaatggtagtgacagtagtaaaagagagtaccctttttgccctttcgcacgcagttctcaatctcctcaaggcccttgggttccc 15595059  T
Q  231 acttatgtccaccttattcttc 252  Q
    | | || ||||| || ||||||    
T  15595060 agtaatatccactttgttcttc 15595081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 221
Target Start/End: Complemental strand, 34467089 - 34466945
Alignment:
Q  69 gtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaa 168  Q
    ||||||||| |||||||||||||||||||| |||||||| |||   ||||||||| ||| | ||||||||||||  || ||||| | ||||||           
T  34467089 gtccatattgatttcctcaaacttggcacgagtgattgacgaatggaagtcaattacctcatataaagaatctatttcaacagtagcgacaaa------- 34466997  T
Q  169 gagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctct 221  Q
     ||||||||||||||||  |||| || |||||||||||||||||||| |||||    
T  34466996 -agagtgtcctctttgcattctcgcacgcagttctcaacctcctcaaagctct 34466945  T

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Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 52549345 - 52549264
Alignment:
Q  40 tcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaa 121  Q
    |||||| | ||||||||||| || |||||||||||||| ||||||||||||||||| |   |||| ||||||||||| ||||    
T  52549345 tcaacaatcttcatacactccttaaaaaggtccatattcatttcctcaaacttggccctattgatcgatgaagaaaaatcaa 52549264  T

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Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 9336245 - 9336047
Alignment:
Q  19 tttgaatcaccgagacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagt 118  Q
    |||||||| | ||||||  | |||||| | ||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||||||||||||    
T  9336245 tttgaatccctgagacaggtgtcaacaatattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagt 9336146  T
Q  119 caattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaagg 217  Q
    | ||||||  |||||||| ||||||||| |||||||| |||||||||||||| ||| |||| |||||||||||||| ||||||||||||||||| ||||    
T  9336145 cgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaagg 9336047  T

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Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 252
Target Start/End: Original strand, 30775078 - 30775299
Alignment:
Q  31 agacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaa 130  Q
    |||||| |||||||||| |  ||||||||||| |||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||  | ||||    
T  30775078 agacaactctcaacagtctgtatacactcattaaaaaggtccatattgatttcctcaaacttgacacgagtgattgatgaagaaaagtcaatgtcttgaa 30775177  T
Q  131 ataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattccc 230  Q
    |||||  ||||| ||| |||   |||| |||    || ||||||||||| |||||| | ||||||||||||||||||   ||||| ||||||||||||||    
T  30775178 ataaattatctatctcaacaaatgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggattccc 30775277  T
Q  231 acttatgtccaccttattcttc 252  Q
      | |||||||| || ||||||    
T  30775278 ggtaatgtccacgttgttcttc 30775299  T

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Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 143
Target Start/End: Original strand, 35132282 - 35132395
Alignment:
Q  30 gagacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctga 129  Q
    ||||||| |||| || || |||||||||||||| ||||||||   ||| ||||||||||||||||| ||  |||||||||||||||| ||||| || |||    
T  35132282 gagacaactctctacggtattcatacactcattaaaaaggtctgcattcatttcctcaaacttggcgcgattgattgatgaagaaaaatcaatgccttga 35132381  T
Q  130 aataaagaatctac 143  Q
    ||||||||||||||    
T  35132382 aataaagaatctac 35132395  T

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Target: chr5 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 38 - 252
Target Start/End: Original strand, 28219751 - 28219965
Alignment:
Q  38 tctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaaataaaga 137  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||| ||||| || ||||||||| | || ||||| || | |||||||||    
T  28219751 tctcaacagttttcaaacactcattgaaaagatccatattgatttcctcaaacttagcacgagtaattgatgaaaagaaatcaatgccttcaaataaaga 28219850  T
Q  138 atctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatg 237  Q
    ||||||||| |  |||| ||||| ||||||||| |||||||| ||||| ||||  || || |||||||||||||| ||||||||||  || ||| | |||    
T  28219851 atctacctcaatggtggcgacaacagcaaaagatagtgtcctttttgctctcttgcacgctgttctcaacctccttaaggctcttgagtttccagtaatg 28219950  T
Q  238 tccaccttattcttc 252  Q
    |||||||| ||||||    
T  28219951 tccaccttgttcttc 28219965  T

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Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 31 - 252
Target Start/End: Original strand, 43744642 - 43744863
Alignment:
Q  31 agacaattctcaacagttttcatacactcattgaaaaggtccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaa 130  Q
    |||||| |||||||| |||||| |||||| ||||| || |||||||| |||||||||||||| | ||| ||||||| || | | || ||||| |||| ||    
T  43744642 agacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaacttagtacgagtgattgttgtaaagaaatcaatgccctcaa 43744741  T
Q  131 ataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattccc 230  Q
    |||||||||||||||| | ||||||||||| ||||||||| | |||||| ||||| || || ||||| |||||||||||||| || |||||||| || ||    
T  43744742 ataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcctttttgctctttcgcatgctgttctcaacctccttaatgctcttgggtttcc 43744841  T
Q  231 acttatgtccaccttattcttc 252  Q
    | | ||||||||||| ||||||    
T  43744842 agtaatgtccaccttgttcttc 43744863  T

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