View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10534_13 (Length: 334)
Name: NF10534_13
Description: NF10534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10534_13 |
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Alignment Details
Target: chr3 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 39441151 - 39441478
Alignment:
| Q |
1 |
tggatataggttaggagaaattactagtaacaattggttaggacagtatcaattggttctttacgcattggcttctgagtcaagttttgtaaatttcagc |
100 |
Q |
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| T |
39441151 |
tggatataggttaggagaaattactagtaacaattggttaggacagtatcaattggttctttacgcattggcttctgagtcaagttttgtaaatttcagc |
39441250 |
T |
|
| Q |
101 |
ttcaaaattcattctaaaaactcatgttgtgtggctgacacctattgccaataatatgagccccgtttacact-attttcaatcctctctgatggaattg |
199 |
Q |
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| T |
39441251 |
ttcaaaattcattctaaaaactcatgttgtgtggctgacacctattgccaataatatgagccccgtttacactaattttcaatcctctctgatggaattg |
39441350 |
T |
|
| Q |
200 |
catgacacatcttattcaactaaccttctactatagtacattgttttgtttgggcacttctactacagtggtaaatactaataattttgcatgcatatgg |
299 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39441351 |
cataacacatcttattcaactaaccttctactatagtacattgttttgtttgggcacttctactacagtggtaaatactaataattttgcatgcatatgg |
39441450 |
T |
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| Q |
300 |
agaattattacttttttacaagaattat |
327 |
Q |
| |
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|||||||||||||||||||||||||||| |
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| T |
39441451 |
agaattattacttttttacaagaattat |
39441478 |
T |
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