View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10534_16 (Length: 327)
Name: NF10534_16
Description: NF10534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10534_16 |
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Alignment Details
Target: chr5 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 368498 - 368342
Alignment:
| Q |
18 |
aaaatttgtttaccatttctatgtattgcttttaaacaatgatttttaagtcctatattgcgtgaaatcacaagatttggatcatgctatggatgtaaag |
117 |
Q |
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| T |
368498 |
aaaatttgtttaccatttctatgtattgcttttaaacaatgatttttaggtcctatattgcgtgaaatcacaagatttggatcatgctttggatgtaaag |
368399 |
T |
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| Q |
118 |
taatgctgaaatgattgaggatgatattgatctaattttctctcactaacaatgttg |
174 |
Q |
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| T |
368398 |
taatgctgaaatgattgaggatgatattgatctaattttctctcgctaacaatgttg |
368342 |
T |
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