View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10534_5 (Length: 418)
Name: NF10534_5
Description: NF10534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10534_5 |
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Alignment Details
Target: chr6 (Bit Score: 300; Significance: 1e-168; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 26 - 392
Target Start/End: Original strand, 30139985 - 30140342
Alignment:
| Q |
26 |
ggacgttatcatgcatgcatgcatgcatcaaaaatattataataagaaatttcttgaattcattatcatgcatgcatcacaattattatatatttgatgg |
125 |
Q |
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| T |
30139985 |
ggacgttatcatgcatgcatgcatgcatcaaaaatattataataagaaatttcttgaattcattatcatgcatgcatcacaattattatatatttgatgg |
30140084 |
T |
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| Q |
126 |
ttgg-tcgagtgaaatgaagggaacaaaacatacacaaatttggattaaaatgaaggaaataaaaaacatgaatcaattaacatgcacaaatttggatat |
224 |
Q |
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| T |
30140085 |
ttgaattgaa-gaaatgaagggaacaaaacatacacaaatttggattaaaatgaaggaaataaaaaacatgaatcaattaacatgcacaaatttggatat |
30140183 |
T |
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| Q |
225 |
atggtaaaagggataatataagaataataagaaaaggaagaaaaagttcccgctaagccatgaaatgaaggaagcagaggcttagcgagaacaaaagtct |
324 |
Q |
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| T |
30140184 |
atggtaaaggggataatataagaataataaga---------aaaagttcccgctaagccatgaaatgaaggaagaagaggcttagcgagaacaaaagtct |
30140274 |
T |
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| Q |
325 |
gaatgaatgaagaaatgaaaaaagaataaggaaggtatgaggaacattgggattttggaggttggaat |
392 |
Q |
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| T |
30140275 |
gaatgaatgaagaaatgaaaaaagaataaggaaggtatgaggaacattgggattttggaggttggaat |
30140342 |
T |
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