View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10534_low_5 (Length: 285)

Name: NF10534_low_5
Description: NF10534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10534_low_5
NF10534_low_5
[»] chr2 (21 HSPs)
chr2 (78-268)||(2815749-2815940)
chr2 (25-58)||(2438226-2438259)
chr2 (25-58)||(7491845-7491878)
chr2 (25-58)||(8716895-8716928)
chr2 (25-58)||(11201684-11201717)
chr2 (25-58)||(17408297-17408330)
chr2 (25-58)||(20252211-20252244)
chr2 (25-58)||(27560207-27560240)
chr2 (25-58)||(34062668-34062701)
chr2 (25-58)||(34113789-34113822)
chr2 (25-58)||(34883851-34883884)
chr2 (25-58)||(36131031-36131064)
chr2 (25-58)||(40607703-40607736)
chr2 (25-58)||(41450517-41450550)
chr2 (26-58)||(2438489-2438521)
chr2 (26-58)||(7492108-7492140)
chr2 (26-58)||(16108216-16108248)
chr2 (26-58)||(22897655-22897687)
chr2 (26-58)||(39833740-39833772)
chr2 (25-57)||(42629373-42629405)
chr2 (26-58)||(45474352-45474384)
[»] chr8 (26 HSPs)
chr8 (78-210)||(1427149-1427281)
chr8 (25-58)||(51098-51131)
chr8 (25-58)||(1774343-1774376)
chr8 (25-58)||(2944275-2944308)
chr8 (25-58)||(8251936-8251969)
chr8 (25-58)||(8951431-8951464)
chr8 (25-58)||(13153929-13153962)
chr8 (25-58)||(17856779-17856812)
chr8 (25-58)||(18754145-18754178)
chr8 (25-58)||(26016570-26016603)
chr8 (25-58)||(28192178-28192211)
chr8 (25-58)||(28572047-28572080)
chr8 (25-58)||(28579640-28579673)
chr8 (25-58)||(29598225-29598258)
chr8 (25-54)||(32522846-32522875)
chr8 (25-58)||(32675760-32675793)
chr8 (25-58)||(34568491-34568524)
chr8 (25-58)||(38878722-38878755)
chr8 (25-58)||(39029179-39029212)
chr8 (25-58)||(42885055-42885088)
chr8 (26-58)||(11798869-11798901)
chr8 (26-58)||(13154192-13154224)
chr8 (26-58)||(29279460-29279492)
chr8 (26-58)||(40530410-40530442)
chr8 (26-58)||(43653944-43653976)
chr8 (26-58)||(44250860-44250892)
[»] scaffold0604 (1 HSPs)
scaffold0604 (25-58)||(3785-3818)
[»] scaffold0122 (1 HSPs)
scaffold0122 (25-58)||(12066-12099)
[»] scaffold0029 (1 HSPs)
scaffold0029 (25-58)||(51685-51718)
[»] scaffold0012 (1 HSPs)
scaffold0012 (25-58)||(47641-47674)
[»] scaffold0008 (1 HSPs)
scaffold0008 (25-58)||(259125-259158)
[»] scaffold0002 (1 HSPs)
scaffold0002 (25-58)||(355334-355367)
[»] chr7 (21 HSPs)
chr7 (25-58)||(18113169-18113202)
chr7 (25-58)||(19920564-19920597)
chr7 (25-58)||(21295152-21295185)
chr7 (25-58)||(26255097-26255130)
chr7 (25-58)||(29286040-29286073)
chr7 (25-58)||(32814434-32814467)
chr7 (25-58)||(32872378-32872411)
chr7 (25-58)||(33858869-33858902)
chr7 (25-58)||(36698134-36698167)
chr7 (25-58)||(38858299-38858332)
chr7 (25-58)||(39197719-39197752)
chr7 (25-58)||(39871616-39871649)
chr7 (25-58)||(40300231-40300264)
chr7 (25-58)||(41026099-41026132)
chr7 (25-58)||(41252364-41252397)
chr7 (25-58)||(48521030-48521063)
chr7 (22-58)||(1275733-1275769)
chr7 (26-58)||(20075111-20075143)
chr7 (26-58)||(28060981-28061013)
chr7 (26-58)||(29176993-29177025)
chr7 (26-58)||(38428411-38428443)
[»] chr6 (12 HSPs)
chr6 (25-58)||(231108-231141)
chr6 (25-58)||(4844401-4844434)
chr6 (25-58)||(8743189-8743222)
chr6 (25-58)||(9038643-9038676)
chr6 (25-58)||(10195996-10196029)
chr6 (25-58)||(11847835-11847868)
chr6 (25-58)||(19097804-19097837)
chr6 (25-58)||(23398142-23398175)
chr6 (25-58)||(30248648-30248681)
chr6 (25-58)||(34301835-34301868)
chr6 (26-58)||(9388530-9388562)
chr6 (26-58)||(34741730-34741762)
[»] chr5 (15 HSPs)
chr5 (25-58)||(1265950-1265983)
chr5 (25-58)||(6673231-6673264)
chr5 (25-58)||(7951563-7951596)
chr5 (25-58)||(9020695-9020728)
chr5 (25-58)||(9828394-9828427)
chr5 (25-58)||(10734526-10734559)
chr5 (25-58)||(14913649-14913682)
chr5 (25-58)||(16127260-16127293)
chr5 (25-58)||(22527693-22527726)
chr5 (25-58)||(26894876-26894909)
chr5 (25-58)||(34662205-34662238)
chr5 (25-58)||(40004412-40004445)
chr5 (26-58)||(186362-186394)
chr5 (26-58)||(9828657-9828689)
chr5 (26-58)||(32147555-32147587)
[»] chr4 (22 HSPs)
chr4 (25-58)||(4035826-4035859)
chr4 (25-58)||(5375560-5375593)
chr4 (25-58)||(5743662-5743695)
chr4 (25-58)||(9328243-9328276)
chr4 (25-58)||(20391440-20391473)
chr4 (25-58)||(26626005-26626038)
chr4 (25-58)||(30771529-30771562)
chr4 (25-58)||(32032996-32033029)
chr4 (25-58)||(33413519-33413552)
chr4 (25-58)||(34273222-34273255)
chr4 (25-58)||(35675923-35675956)
chr4 (25-58)||(44294790-44294823)
chr4 (25-58)||(45742809-45742842)
chr4 (25-58)||(47806861-47806894)
chr4 (25-58)||(49228721-49228754)
chr4 (25-58)||(52870645-52870678)
chr4 (25-58)||(52977983-52978016)
chr4 (26-58)||(4036089-4036121)
chr4 (26-58)||(4549630-4549662)
chr4 (26-58)||(20747434-20747466)
chr4 (26-58)||(29014065-29014097)
chr4 (26-58)||(55632000-55632032)
[»] chr3 (31 HSPs)
chr3 (25-58)||(4024053-4024086)
chr3 (25-58)||(7181351-7181384)
chr3 (25-58)||(9499500-9499533)
chr3 (25-58)||(10220934-10220967)
chr3 (25-58)||(12050395-12050428)
chr3 (25-58)||(14428611-14428644)
chr3 (25-58)||(21756487-21756520)
chr3 (25-58)||(22103932-22103965)
chr3 (25-58)||(25149125-25149158)
chr3 (25-58)||(26593768-26593801)
chr3 (25-58)||(35868086-35868119)
chr3 (25-58)||(37728714-37728747)
chr3 (25-58)||(43868104-43868137)
chr3 (25-58)||(44543783-44543816)
chr3 (25-58)||(45252774-45252807)
chr3 (25-58)||(46049989-46050022)
chr3 (25-58)||(50647947-50647980)
chr3 (25-58)||(51284065-51284098)
chr3 (26-58)||(4024315-4024347)
chr3 (26-58)||(9779980-9780012)
chr3 (26-58)||(14428873-14428905)
chr3 (22-54)||(14758843-14758875)
chr3 (26-58)||(16434978-16435010)
chr3 (26-58)||(20862461-20862493)
chr3 (26-58)||(26806116-26806148)
chr3 (26-58)||(31531415-31531447)
chr3 (26-58)||(33868712-33868744)
chr3 (26-58)||(36005768-36005800)
chr3 (26-58)||(50647685-50647717)
chr3 (26-58)||(52058986-52059018)
chr3 (22-58)||(54604588-54604624)
[»] chr1 (30 HSPs)
chr1 (25-58)||(943640-943673)
chr1 (25-58)||(1039384-1039417)
chr1 (25-58)||(1046290-1046323)
chr1 (25-58)||(4102717-4102750)
chr1 (25-58)||(11741398-11741431)
chr1 (25-58)||(14171543-14171576)
chr1 (25-58)||(15811235-15811268)
chr1 (25-58)||(23541980-23542013)
chr1 (25-58)||(30289865-30289898)
chr1 (25-58)||(30290266-30290299)
chr1 (25-58)||(36694855-36694888)
chr1 (25-58)||(36710956-36710989)
chr1 (25-58)||(37951952-37951985)
chr1 (25-58)||(38920240-38920273)
chr1 (25-58)||(39363197-39363230)
chr1 (25-58)||(39497434-39497467)
chr1 (25-58)||(44649630-44649663)
chr1 (25-58)||(45039413-45039446)
chr1 (25-58)||(46075870-46075903)
chr1 (25-58)||(49907022-49907055)
chr1 (25-58)||(52431177-52431210)
chr1 (26-58)||(1047993-1048025)
chr1 (26-58)||(9202246-9202278)
chr1 (22-58)||(16576092-16576128)
chr1 (26-58)||(23542243-23542275)
chr1 (26-58)||(39362935-39362967)
chr1 (26-58)||(39497697-39497729)
chr1 (26-58)||(39750122-39750154)
chr1 (26-58)||(44646535-44646567)
chr1 (26-58)||(44649893-44649925)
[»] scaffold0025 (1 HSPs)
scaffold0025 (26-58)||(65379-65411)


Alignment Details
Target: chr2 (Bit Score: 176; Significance: 7e-95; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 78 - 268
Target Start/End: Complemental strand, 2815940 - 2815749
Alignment:
Q  78 tgatgttgtgcaggcctttattggtggtatcactgcctctggagttgtagcttgtggattgagacttttcacaaaatattattttgagaaatctggcaac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2815940 tgatgttgtgcaggcctttattggtggtatcactgcctctggagttgtagcttgtggattgagacttttcacaaaatattattttgagaaatctggcaac 2815841  T
Q  178 ggccttcgc-aaaggggcttgtatgttattctttatttactcacttatgcgcacatatttgtttaatcacagtaaagcatacaccaattttt 268  Q
    | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2815840 gcccttcgcaaaaggggcttgtatgttattctttatttactcacttatgcgcaaatatttgtttaatcacagtaaagcatacaccaattttt 2815749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 2438259 - 2438226
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  2438259 tcaaaagggtcttataattagggacggagggagt 2438226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 7491878 - 7491845
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  7491878 tcaaaagggtcttataattagggacggagggagt 7491845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 8716895 - 8716928
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  8716895 tcaaaagggtcttataattagggacggagggagt 8716928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 11201717 - 11201684
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  11201717 tcaaaagggtcttataattagggacggagggagt 11201684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 17408297 - 17408330
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  17408297 tcaaaagggtcttataattagggacggagggagt 17408330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 20252244 - 20252211
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  20252244 tcaaaagggtcttataattagggacggagggagt 20252211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 27560240 - 27560207
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  27560240 tcaaaagggtcttataattagggacggagggagt 27560207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 34062668 - 34062701
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  34062668 tcaaaagggtcttataattagggacggagggagt 34062701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 34113789 - 34113822
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  34113789 tcaaaagggtcttataattagggacggagggagt 34113822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 34883851 - 34883884
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  34883851 tcaaaagggtcttataattagggacggagggagt 34883884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 36131031 - 36131064
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  36131031 tcaaaagggtcttataattagggacggagggagt 36131064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 40607736 - 40607703
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  40607736 tcaaaagggtcttataattagggacggagggagt 40607703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 41450550 - 41450517
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  41450550 tcaaaagggtcttataattagggacggagggagt 41450517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 2438489 - 2438521
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  2438489 caaaagggtcttataattagggacggagggagt 2438521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 7492108 - 7492140
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  7492108 caaaagggtcttataattagggacggagggagt 7492140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 16108248 - 16108216
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  16108248 caaaagggtcttataattagggacggagggagt 16108216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 22897655 - 22897687
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  22897655 caaaagggtcttataattagggacggagggagt 22897687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 39833772 - 39833740
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  39833772 caaaagggtcttataattagggacggagggagt 39833740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 42629405 - 42629373
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggag 57  Q
    ||||||||||||||||||||| |||||||||||    
T  42629405 tcaaaagggtcttataattagggacggagggag 42629373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 45474384 - 45474352
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  45474384 caaaagggtcttataattagggacggagggagt 45474352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 1e-47; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 78 - 210
Target Start/End: Original strand, 1427149 - 1427281
Alignment:
Q  78 tgatgttgtgcaggcctttattggtggtatcactgcctctggagttgtagcttgtggattgagacttttcacaaaatattattttgagaaatctggcaac 177  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| |||||||    
T  1427149 tgatgttatgcaggcctttattggtggtataactgcctctggagttgtggcttgtggtttgagacttttaacaaaatattattttgagaaatatggcaac 1427248  T
Q  178 ggccttcgcaaaggggcttgtatgttattcttt 210  Q
    || || |||||||||||||||| ||||||||||    
T  1427249 ggactccgcaaaggggcttgtacgttattcttt 1427281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 51098 - 51131
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  51098 tcaaaagggtcttataattagggacggagggagt 51131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 1774376 - 1774343
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  1774376 tcaaaagggtcttataattagggacggagggagt 1774343  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 2944275 - 2944308
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  2944275 tcaaaagggtcttataattagggacggagggagt 2944308  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 8251936 - 8251969
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  8251936 tcaaaagggtcttataattagggacggagggagt 8251969  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 8951431 - 8951464
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  8951431 tcaaaagggtcttataattagggacggagggagt 8951464  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 13153962 - 13153929
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  13153962 tcaaaagggtcttataattagggacggagggagt 13153929  T

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Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 17856779 - 17856812
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  17856779 tcaaaagggtcttataattagggacggagggagt 17856812  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 18754178 - 18754145
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  18754178 tcaaaagggtcttataattagggacggagggagt 18754145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 26016603 - 26016570
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  26016603 tcaaaagggtcttataattagggacggagggagt 26016570  T

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Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 28192178 - 28192211
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  28192178 tcaaaagggtcttataattagggacggagggagt 28192211  T

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Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 28572080 - 28572047
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  28572080 tcaaaagggtcttataattagggacggagggagt 28572047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 28579673 - 28579640
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  28579673 tcaaaagggtcttataattagggacggagggagt 28579640  T

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Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 29598258 - 29598225
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  29598258 tcaaaagggtcttataattagagacggagggagt 29598225  T

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Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 54
Target Start/End: Original strand, 32522846 - 32522875
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagg 54  Q
    ||||||||||||||||||||||||||||||    
T  32522846 tcaaaagggtcttataattagcgacggagg 32522875  T

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Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 32675760 - 32675793
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  32675760 tcaaaagggtcttataattagggacggagggagt 32675793  T

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Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 34568524 - 34568491
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  34568524 tcaaaagggtcttataattagggacggagggagt 34568491  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 38878755 - 38878722
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  38878755 tcaaaagggtcttataattagagacggagggagt 38878722  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 39029212 - 39029179
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  39029212 tcaaaagggtcttataattagggacggagggagt 39029179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 42885088 - 42885055
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  42885088 tcaaaagggtcttataattagggacggagggagt 42885055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 11798869 - 11798901
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  11798869 caaaagggtcttataattagggacggagggagt 11798901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 13154192 - 13154224
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  13154192 caaaagggtcttataattagggacggagggagt 13154224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 29279460 - 29279492
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  29279460 caaaagggtcttataattagggacggagggagt 29279492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 40530410 - 40530442
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  40530410 caaaagggtcttataattagggacggagggagt 40530442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 43653976 - 43653944
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  43653976 caaaagggtcttataattagggacggagggagt 43653944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 44250892 - 44250860
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  44250892 caaaagggtcttataattagggacggagggagt 44250860  T

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Target: scaffold0604 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 3785 - 3818
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  3785 tcaaaagggtcttataattagggacggagggagt 3818  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 12099 - 12066
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  12099 tcaaaagggtcttataattagggacggagggagt 12066  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 51685 - 51718
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  51685 tcaaaagggtcttataattagggacggagggagt 51718  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 47674 - 47641
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  47674 tcaaaagggtcttataattagggacggagggagt 47641  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 259125 - 259158
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  259125 tcaaaagggtcttataattagggacggagggagt 259158  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 355334 - 355367
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  355334 tcaaaagggtcttataattagggacggagggagt 355367  T

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Target: chr7 (Bit Score: 30; Significance: 0.0000001; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 18113169 - 18113202
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  18113169 tcaaaagggtcttataattagagacggagggagt 18113202  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 19920597 - 19920564
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  19920597 tcaaaagggtcttataattagggacggagggagt 19920564  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 21295185 - 21295152
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  21295185 tcaaaagggtcttataattagggacggagggagt 21295152  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 26255130 - 26255097
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  26255130 tcaaaagggtcttataattagggacggagggagt 26255097  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 29286040 - 29286073
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  29286040 tcaaaagggtcttataattagggacggagggagt 29286073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 32814467 - 32814434
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  32814467 tcaaaagggtcttataattagggacggagggagt 32814434  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 32872378 - 32872411
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  32872378 tcaaaagggtcttataattagggacggagggagt 32872411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 33858869 - 33858902
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  33858869 tcaaaagggtcttataattagggacggagggagt 33858902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 36698134 - 36698167
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  36698134 tcaaaagggtcttataattagggacggagggagt 36698167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 38858332 - 38858299
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  38858332 tcaaaagggtcttataattagggacggagggagt 38858299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 39197752 - 39197719
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  39197752 tcaaaagggtcttataattagggacggagggagt 39197719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 39871616 - 39871649
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  39871616 tcaaaagggtcttataattagggacggagggagt 39871649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 40300264 - 40300231
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  40300264 tcaaaagggtcttataattagggacggagggagt 40300231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 41026099 - 41026132
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  41026099 tcaaaagggtcttataattagggacggagggagt 41026132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 41252364 - 41252397
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  41252364 tcaaaagggtcttataattagggacggagggagt 41252397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 48521063 - 48521030
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  48521063 tcaaaagggtcttataattagggacggagggagt 48521030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 1275733 - 1275769
Alignment:
Q  22 ttatcaaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||||||| || |||||||||    
T  1275733 ttatcaaaagggtcttataattagggatggagggagt 1275769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 20075111 - 20075143
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  20075111 caaaagggtcttataattagggacggagggagt 20075143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 28060981 - 28061013
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  28060981 caaaagggtcttataattagggacggagggagt 28061013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 29177025 - 29176993
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  29177025 caaaagggtcttataattagagacggagggagt 29176993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 38428411 - 38428443
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  38428411 caaaagggtcttataattagggacggagggagt 38428443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 231108 - 231141
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  231108 tcaaaagggtcttataattagggacggagggagt 231141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 4844434 - 4844401
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  4844434 tcaaaagggtcttataattagggacggagggagt 4844401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 8743222 - 8743189
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  8743222 tcaaaagggtcttataattagggacggagggagt 8743189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 9038676 - 9038643
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  9038676 tcaaaagggtcttataattagggacggagggagt 9038643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 10195996 - 10196029
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  10195996 tcaaaagggtcttataattagagacggagggagt 10196029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 11847835 - 11847868
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  11847835 tcaaaagggtcttataattagggacggagggagt 11847868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 19097804 - 19097837
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  19097804 tcaaaagggtcttataattagagacggagggagt 19097837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 23398142 - 23398175
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  23398142 tcaaaagggtcttataattagggacggagggagt 23398175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 30248681 - 30248648
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  30248681 tcaaaagggtcttataattagggacggagggagt 30248648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 34301835 - 34301868
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  34301835 tcaaaagggtcttataattagggacggagggagt 34301868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 9388562 - 9388530
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  9388562 caaaagggtcttataattagggacggagggagt 9388530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 34741730 - 34741762
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  34741730 caaaagggtcttataattagggacggagggagt 34741762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 1265983 - 1265950
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  1265983 tcaaaagggtcttataattagggacggagggagt 1265950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 6673231 - 6673264
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  6673231 tcaaaagggtcttataattagggacggagggagt 6673264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 7951596 - 7951563
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  7951596 tcaaaagggtcttataattagggacggagggagt 7951563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 9020728 - 9020695
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  9020728 tcaaaagggtcttataattagggacggagggagt 9020695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 9828427 - 9828394
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  9828427 tcaaaagggtcttataattagggacggagggagt 9828394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 10734526 - 10734559
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  10734526 tcaaaagggtcttataattagggacggagggagt 10734559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 14913682 - 14913649
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  14913682 tcaaaagggtcttataattagggacggagggagt 14913649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 16127293 - 16127260
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  16127293 tcaaaagggtcttataattagggacggagggagt 16127260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 22527726 - 22527693
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  22527726 tcaaaagggtcttataattagggacggagggagt 22527693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 26894876 - 26894909
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  26894876 tcaaaagggtcttataattagggacggagggagt 26894909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 34662238 - 34662205
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  34662238 tcaaaagggtcttataattagggacggagggagt 34662205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 40004412 - 40004445
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  40004412 tcaaaagggtcttataattagggacggagggagt 40004445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 186362 - 186394
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  186362 caaaagggtcttataattagggacggagggagt 186394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 9828657 - 9828689
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  9828657 caaaagggtcttataattagggacggagggagt 9828689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 32147555 - 32147587
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  32147555 caaaagggtcttataattagagacggagggagt 32147587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 4035859 - 4035826
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  4035859 tcaaaagggtcttataattagggacggagggagt 4035826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 5375560 - 5375593
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  5375560 tcaaaagggtcttataattagggacggagggagt 5375593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 5743662 - 5743695
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  5743662 tcaaaagggtcttataattagggacggagggagt 5743695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 9328243 - 9328276
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  9328243 tcaaaagggtcttataattagggacggagggagt 9328276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 20391440 - 20391473
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  20391440 tcaaaagggtcttataattagggacggagggagt 20391473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 26626005 - 26626038
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  26626005 tcaaaagggtcttataattagggacggagggagt 26626038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 30771562 - 30771529
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  30771562 tcaaaagggtcttataattagggacggagggagt 30771529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 32032996 - 32033029
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  32032996 tcaaaagggtcttataattagggacggagggagt 32033029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 33413552 - 33413519
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  33413552 tcaaaagggtcttataattagggacggagggagt 33413519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 34273222 - 34273255
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  34273222 tcaaaagggtcttataattagggacggagggagt 34273255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 35675923 - 35675956
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  35675923 tcaaaagggtcttataattagggacggagggagt 35675956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 44294823 - 44294790
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  44294823 tcaaaagggtcttataattagggacggagggagt 44294790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 45742809 - 45742842
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  45742809 tcaaaagggtcttataattagggacggagggagt 45742842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 47806894 - 47806861
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  47806894 tcaaaagggtcttataattagggacggagggagt 47806861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 49228721 - 49228754
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  49228721 tcaaaagggtcttataattagagacggagggagt 49228754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 52870678 - 52870645
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  52870678 tcaaaagggtcttataattagagacggagggagt 52870645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 52978016 - 52977983
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  52978016 tcaaaagggtcttataattagggacggagggagt 52977983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 4036089 - 4036121
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  4036089 caaaagggtcttataattagggacggagggagt 4036121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 4549662 - 4549630
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  4549662 caaaagggtcttataattagggacggagggagt 4549630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 20747434 - 20747466
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  20747434 caaaagggtcttataattagggacggagggagt 20747466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 29014097 - 29014065
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  29014097 caaaagggtcttataattagggacggagggagt 29014065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 55632032 - 55632000
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  55632032 caaaagggtcttataattagggacggagggagt 55632000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 30; Significance: 0.0000001; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 4024086 - 4024053
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  4024086 tcaaaagggtcttataattagggacggagggagt 4024053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 7181384 - 7181351
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  7181384 tcaaaagggtcttataattagggacggagggagt 7181351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 9499500 - 9499533
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  9499500 tcaaaagggtcttataattagggacggagggagt 9499533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 10220967 - 10220934
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  10220967 tcaaaagggtcttataattagggacggagggagt 10220934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 12050395 - 12050428
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  12050395 tcaaaagggtcttataattagggacggagggagt 12050428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 14428644 - 14428611
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  14428644 tcaaaagggtcttataattagggacggagggagt 14428611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 21756520 - 21756487
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  21756520 tcaaaagggtcttataattagggacggagggagt 21756487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 22103932 - 22103965
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  22103932 tcaaaagggtcttataattagggacggagggagt 22103965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 25149125 - 25149158
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  25149125 tcaaaagggtcttataattagggacggagggagt 25149158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 26593768 - 26593801
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  26593768 tcaaaagggtcttataattagggacggagggagt 26593801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 35868086 - 35868119
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  35868086 tcaaaagggtcttataattagggacggagggagt 35868119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 37728747 - 37728714
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  37728747 tcaaaagggtcttataattagggacggagggagt 37728714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 43868137 - 43868104
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  43868137 tcaaaagggtcttataattagggacggagggagt 43868104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 44543816 - 44543783
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  44543816 tcaaaagggtcttataattagggacggagggagt 44543783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 45252807 - 45252774
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  45252807 tcaaaagggtcttataattagggacggagggagt 45252774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 46049989 - 46050022
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  46049989 tcaaaagggtcttataattagggacggagggagt 46050022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 50647947 - 50647980
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  50647947 tcaaaagggtcttataattagagacggagggagt 50647980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 51284065 - 51284098
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  51284065 tcaaaagggtcttataattagggacggagggagt 51284098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 4024315 - 4024347
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  4024315 caaaagggtcttataattagggacggagggagt 4024347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 9780012 - 9779980
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  9780012 caaaagggtcttataattagggacggagggagt 9779980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 14428873 - 14428905
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  14428873 caaaagggtcttataattagggacggagggagt 14428905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 14758875 - 14758843
Alignment:
Q  22 ttatcaaaagggtcttataattagcgacggagg 54  Q
    |||||||||||||||||||||||| ||||||||    
T  14758875 ttatcaaaagggtcttataattagggacggagg 14758843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 16435010 - 16434978
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  16435010 caaaagggtcttataattagggacggagggagt 16434978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 20862461 - 20862493
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  20862461 caaaagggtcttataattagggacggagggagt 20862493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 26806148 - 26806116
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  26806148 caaaagggtcttataattagggacggagggagt 26806116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 31531415 - 31531447
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  31531415 caaaagggtcttataattagggacggagggagt 31531447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 33868712 - 33868744
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  33868712 caaaagggtcttataattagggacggagggagt 33868744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 36005768 - 36005800
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  36005768 caaaagggtcttataattagggacggagggagt 36005800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 50647717 - 50647685
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  50647717 caaaagggtcttataattagggacggagggagt 50647685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 52059018 - 52058986
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  52059018 caaaagggtcttataattagggacggagggagt 52058986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 54604588 - 54604624
Alignment:
Q  22 ttatcaaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||||||  ||||||||||||    
T  54604588 ttatcaaaagggtcttataattaaggacggagggagt 54604624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 30; Significance: 0.0000001; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 943640 - 943673
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  943640 tcaaaagggtcttataattagggacggagggagt 943673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 1039384 - 1039417
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  1039384 tcaaaagggtcttataattagggacggagggagt 1039417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 1046290 - 1046323
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  1046290 tcaaaagggtcttataattagggacggagggagt 1046323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 4102717 - 4102750
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  4102717 tcaaaagggtcttataattagggacggagggagt 4102750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 11741431 - 11741398
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  11741431 tcaaaagggtcttataattagggacggagggagt 11741398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 14171576 - 14171543
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  14171576 tcaaaagggtcttataattagagacggagggagt 14171543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 15811235 - 15811268
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  15811235 tcaaaagggtcttataattagggacggagggagt 15811268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 23542013 - 23541980
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  23542013 tcaaaagggtcttataattagggacggagggagt 23541980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 30289865 - 30289898
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  30289865 tcaaaagggtcttataattagggacggagggagt 30289898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 30290299 - 30290266
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  30290299 tcaaaagggtcttataattagggacggagggagt 30290266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 36694888 - 36694855
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  36694888 tcaaaagggtcttataattagggacggagggagt 36694855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 36710989 - 36710956
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  36710989 tcaaaagggtcttataattagggacggagggagt 36710956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 37951952 - 37951985
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  37951952 tcaaaagggtcttataattagggacggagggagt 37951985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 38920273 - 38920240
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  38920273 tcaaaagggtcttataattagggacggagggagt 38920240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 39363197 - 39363230
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  39363197 tcaaaagggtcttataattagggacggagggagt 39363230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 39497467 - 39497434
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  39497467 tcaaaagggtcttataattagggacggagggagt 39497434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 44649663 - 44649630
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  44649663 tcaaaagggtcttataattagggacggagggagt 44649630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 45039446 - 45039413
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  45039446 tcaaaagggtcttataattagggacggagggagt 45039413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 46075870 - 46075903
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  46075870 tcaaaagggtcttataattagggacggagggagt 46075903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 49907055 - 49907022
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  49907055 tcaaaagggtcttataattagggacggagggagt 49907022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 52431177 - 52431210
Alignment:
Q  25 tcaaaagggtcttataattagcgacggagggagt 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  52431177 tcaaaagggtcttataattagggacggagggagt 52431210  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 1048025 - 1047993
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  1048025 caaaagggtcttataattagggacggagggagt 1047993  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 9202278 - 9202246
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  9202278 caaaagggtcttataattagggacggagggagt 9202246  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 16576092 - 16576128
Alignment:
Q  22 ttatcaaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  16576092 ttatcaaaagagtcttataattagggacggagggagt 16576128  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 23542243 - 23542275
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  23542243 caaaagggtcttataattagggacggagggagt 23542275  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 39362967 - 39362935
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  39362967 caaaagggtcttataattagggacggagggagt 39362935  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 39497697 - 39497729
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  39497697 caaaagggtcttataattagggacggagggagt 39497729  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 39750154 - 39750122
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  39750154 caaaagggtcttataattagggacggagggagt 39750122  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 44646535 - 44646567
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  44646535 caaaagggtcttataattagggacggagggagt 44646567  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 44649893 - 44649925
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  44649893 caaaagggtcttataattagggacggagggagt 44649925  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 65411 - 65379
Alignment:
Q  26 caaaagggtcttataattagcgacggagggagt 58  Q
    |||||||||||||||||||| ||||||||||||    
T  65411 caaaagggtcttataattagggacggagggagt 65379  T

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