View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10534_low_7 (Length: 258)
Name: NF10534_low_7
Description: NF10534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10534_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 30140110 - 30140342
Alignment:
| Q |
1 |
aaacatacacaaatttggattaaaatgaaggaaataaaaaacatgaatcaattaacatgcacaaatttggatatatggtaaaagggataatataagaata |
100 |
Q |
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| T |
30140110 |
aaacatacacaaatttggattaaaatgaaggaaataaaaaacatgaatcaattaacatgcacaaatttggatatatggtaaaggggataatataagaata |
30140209 |
T |
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| Q |
101 |
ataagaaaaggaagaaaaagttcccgctaagccatgaaatgaaggaagcagaggcttagcgagaacaaaagtctgaatgaatgaagaaatgaaaaaagaa |
200 |
Q |
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| T |
30140210 |
ataaga---------aaaagttcccgctaagccatgaaatgaaggaagaagaggcttagcgagaacaaaagtctgaatgaatgaagaaatgaaaaaagaa |
30140300 |
T |
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| Q |
201 |
taaggaaggtatgaggaacattgggattttggaggttggaat |
242 |
Q |
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| T |
30140301 |
taaggaaggtatgaggaacattgggattttggaggttggaat |
30140342 |
T |
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