View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10535_low_7 (Length: 224)
Name: NF10535_low_7
Description: NF10535
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10535_low_7 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 4564625 - 4564829
Alignment:
| Q |
1 |
agagatctaggaagggttaaaagaatcaaattccttaataaagaaacaagagaaagaaggttaagtgaaagttgtgtatgtgaatgtgtgggtcatatat |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4564625 |
agagatataggaagggttaaaagaatcaaattccttaataaagaaacaagagaaagaaggttaagtgaaagttgtgtatgtgaatgtgtgggtcatatat |
4564724 |
T |
|
| Q |
101 |
ggtcatttccttcctaccacttccatgtgaacgtggggtgggtcctgttgcttcaacctctcttctttagcatgtggattttgtcagagggaaaaaactt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4564725 |
ggtcatttccttcctaccacttccatgtgaacgtggggtgggtcctgttgcttcaacctctcttctttagcatgtggattttgtcagagggaaaaaactt |
4564824 |
T |
|
| Q |
201 |
aaaca |
205 |
Q |
| |
|
||||| |
|
|
| T |
4564825 |
aaaca |
4564829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University