View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10536_1 (Length: 586)

Name: NF10536_1
Description: NF10536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10536_1
NF10536_1
[»] chr6 (68 HSPs)
chr6 (305-582)||(12163182-12163459)
chr6 (10-205)||(12162886-12163082)
chr6 (326-559)||(12163551-12163784)
chr6 (344-559)||(12163410-12163625)
chr6 (10-205)||(12210378-12210575)
chr6 (332-498)||(12164229-12164395)
chr6 (326-535)||(12210753-12210953)
chr6 (494-586)||(12163311-12163403)
chr6 (332-528)||(12163971-12164158)
chr6 (326-468)||(12163710-12163852)
chr6 (434-559)||(12163341-12163466)
chr6 (398-559)||(12210666-12210827)
chr6 (464-586)||(12163311-12163433)
chr6 (424-528)||(12163361-12163465)
chr6 (494-585)||(12163659-12163750)
chr6 (464-576)||(12163659-12163771)
chr6 (500-586)||(12163506-12163592)
chr6 (488-585)||(12210696-12210793)
chr6 (470-582)||(12163506-12163618)
chr6 (305-400)||(12163470-12163565)
chr6 (395-498)||(12163173-12163276)
chr6 (305-462)||(12219022-12219182)
chr6 (308-400)||(12163632-12163724)
chr6 (313-381)||(12210680-12210748)
chr6 (413-480)||(12163953-12164020)
chr6 (10-205)||(12192020-12192217)
chr6 (431-585)||(12163527-12163690)
chr6 (458-576)||(12210696-12210814)
chr6 (455-565)||(12210852-12210953)
chr6 (485-558)||(12164322-12164395)
chr6 (355-499)||(12218970-12219117)
chr6 (356-456)||(12219145-12219248)
chr6 (485-559)||(12163965-12164039)
chr6 (455-528)||(12164322-12164395)
chr6 (413-480)||(12164211-12164278)
chr6 (428-498)||(12179158-12179231)
chr6 (386-468)||(12211068-12211150)
chr6 (545-586)||(12163203-12163244)
chr6 (308-369)||(12179083-12179144)
chr6 (308-369)||(12192233-12192294)
chr6 (545-586)||(12210693-12210734)
chr6 (428-468)||(12192326-12192366)
chr6 (500-559)||(12164238-12164297)
chr6 (515-586)||(12164322-12164393)
chr6 (544-586)||(12163301-12163343)
chr6 (407-468)||(12179083-12179144)
chr6 (305-369)||(12211086-12211150)
chr6 (329-400)||(12163524-12163595)
chr6 (429-468)||(12163861-12163900)
chr6 (455-510)||(12163965-12164020)
chr6 (428-475)||(12179245-12179292)
chr6 (429-468)||(12211159-12211198)
chr6 (544-582)||(12163490-12163528)
chr6 (551-585)||(12163971-12164005)
chr6 (551-585)||(12164229-12164263)
chr6 (530-576)||(12164238-12164284)
chr6 (305-399)||(12164301-12164395)
chr6 (423-465)||(12211009-12211051)
chr6 (515-576)||(12163965-12164026)
chr6 (332-399)||(12179161-12179231)
chr6 (455-495)||(12179395-12179435)
chr6 (485-525)||(12179395-12179435)
chr6 (428-468)||(12192377-12192417)
chr6 (455-495)||(12192476-12192516)
chr6 (485-525)||(12192476-12192516)
chr6 (428-468)||(12211311-12211351)
chr6 (455-503)||(12212875-12212923)
chr6 (485-533)||(12212875-12212923)
[»] chr1 (2 HSPs)
chr1 (426-468)||(52819208-52819250)
chr1 (546-586)||(52819210-52819250)


Alignment Details
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 305 - 582
Target Start/End: Original strand, 12163182 - 12163459
Alignment:
Q  305 aagaagccatacaaatacgcttctcctccacctccagtttacaagtacaaatcacctcctccaccagtgtataagtacaagtctcctcctccaccaccga 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12163182 aagaagccatacaaatacgcttctcctccacctccagtttacaagtacaaatcacctcctccaccagtgtataagtataagtctcctcctccaccaccga 12163281  T
Q  405 agaagccatataaatatccatctccaccaccaccagtttacaagtacaagtcacctcctccaccggtttacaagtataagtcacctcctccaccggttta 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||    
T  12163282 agaagccatataaatatccatctccaccaccaccagtttacaagtacaagtcacctcctccaccagtttacaagtataaatctcctccaccaccagttta 12163381  T
Q  505 caagtataagtcacctcctccaccggtttacaagtataaatctcctccaccaccagtttacaagtacaaatcacctcc 582  Q
    |||||| || ||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||| || |||||    
T  12163382 caagtacaaatcacctcctccaccggtgtacaagtataaatcccctcctccaccagtgtacaagtacaagtctcctcc 12163459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 10 - 205
Target Start/End: Original strand, 12162886 - 12163082
Alignment:
Q  10 agatgaatagttaagttaaagtggtaatgaaaaaactatataaagggtgatgctacct-cattacatcaacaacaaaacccactttgggaaaaagatggg 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  12162886 agatgaatagttaagttaaagtggtaatgaaaaaactatataaagggtgatgctgccttcattacatcaacaacgaaacccactttgggaaaaagatggg 12162985  T
Q  109 gtctcaaatggcctctattacactcactattgcattggcaataatctctcttgccttgccatcccaaacttcagcaaacagctacatctattcatct 205  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12162986 gtctcaaatggcctctattactctcactattgcattggcaataatctctcttaccttgccatcccaaacttcagcaaacagctacatctattcatct 12163082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 326 - 559
Target Start/End: Original strand, 12163551 - 12163784
Alignment:
Q  326 tctcctccacctccagtttacaagtacaaatcacctcctccaccagtgtataagtacaagtctcctcctccaccaccgaagaagccatataaatatccat 425  Q
    ||||||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||| || |||||||||||||| ||||    
T  12163551 tctcctccaccaccagtttacaagtataaatcccctcctccaccagtgtacaagtacaagtctcctccaccaccaccaaaaaagccatataaatacccat 12163650  T
Q  426 ctccaccaccaccagtttacaagtacaagtcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataagtcacctcctcc 525  Q
    |||| ||||||||||||||||||||||| ||||||||||| || |||||||||||||| || ||||| ||||| ||||||||||||||||||||||||||    
T  12163651 ctcccccaccaccagtttacaagtacaaatcacctcctcctccagtttacaagtataaatctcctccaccaccagtttacaagtataagtcacctcctcc 12163750  T
Q  526 accggtttacaagtataaatctcctccaccacca 559  Q
     || ||||||||||| |||||||| |||||||||    
T  12163751 cccagtttacaagtacaaatctccaccaccacca 12163784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 344 - 559
Target Start/End: Original strand, 12163410 - 12163625
Alignment:
Q  344 tacaagtacaaatcacctcctccaccagtgtataagtacaagtctcctcctccaccaccgaagaagccatataaatatccatctccaccaccaccagttt 443  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  12163410 tacaagtataaatcccctcctccaccagtgtacaagtacaagtctcctccaccaccacctaagaagccatataaatacccatctccaccaccgccagttt 12163509  T
Q  444 acaagtacaagtcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataa 543  Q
    |||||||||| |||||||| |||||||| |||||||| || || ||||| ||||| |||||||||||||| || ||||||||||| || |||||||| ||    
T  12163510 acaagtacaaatcacctccaccaccggtgtacaagtacaaatctcctccaccaccagtttacaagtataaatcccctcctccaccagtgtacaagtacaa 12163609  T
Q  544 atctcctccaccacca 559  Q
     |||||||||||||||    
T  12163610 gtctcctccaccacca 12163625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 10 - 205
Target Start/End: Original strand, 12210378 - 12210575
Alignment:
Q  10 agatgaatagttaagttaaagtg-gtaatgaaaaaactatataaagggtgatgctacct--cattacatcaacaacaaaacccactttgggaaaaagatg 106  Q
    ||||||||||||||| |||| || |||| ||||||||||||||||||||||||||| ||  ||| | | |||||||||||| |||||||||||||  |||    
T  12210378 agatgaatagttaaggtaaaatgtgtaaagaaaaaactatataaagggtgatgctatctttcataatagcaacaacaaaacacactttgggaaaat-atg 12210476  T
Q  107 gggtctcaaatggcctctattacactcactattgcattggcaataatctctcttgccttgccatcccaaacttcagcaaacagctacatctattcatct 205  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||| |||| |||||||||||  |||||||||||||||    
T  12210477 gggtctcaaatggcctctattactctcactattgcattggcaataatctctcttagcttcccatctcaaatttcagcaaacaattacatctattcatct 12210575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 332 - 498
Target Start/End: Original strand, 12164229 - 12164395
Alignment:
Q  332 ccacctccagtttacaagtacaaatcacctcctccaccagtgtataagtacaagtctcctcctccaccaccgaagaagccatataaatatccatctccac 431  Q
    ||||| ||||||||||||||||||||||||||||| ||||| || |||||||| ||||| || |||||||| ||||| ||||| || || ||||| ||||    
T  12164229 ccaccgccagtttacaagtacaaatcacctcctcctccagtttacaagtacaaatctccaccaccaccacccaagaaaccatacaagtacccatcaccac 12164328  T
Q  432 caccaccagtttacaagtacaagtcacctcctccaccggtttacaagtataagtcacctcctccacc 498  Q
    ||||||| |||||||| || ||||| ||||||||||| |||||||||||||| || |||||||||||    
T  12164329 caccacccgtttacaaatataagtcccctcctccaccagtttacaagtataaatctcctcctccacc 12164395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 326 - 535
Target Start/End: Original strand, 12210753 - 12210953
Alignment:
Q  326 tctcctccacctccagtttacaagtacaaatcacctcctccaccagtgtataagtacaagtctcctcctccaccaccgaagaagccatataaatatccat 425  Q
    ||||| ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||| ||||| || |||||||| ||||| ||||| || ||| |||    
T  12210753 tctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccacccccaccacccaagaaaccatacaagtattcat 12210852  T
Q  426 ctccaccaccaccagtttacaagtacaagtcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataagtcacctcctcc 525  Q
    | ||||||||||||||||||||||| ||||| ||||||||||| ||||||         ||||| |||||||| |||||||||||||| || ||||||||    
T  12210853 caccaccaccaccagtttacaagtataagtctcctcctccacctgtttac---------tcaccacctccaccagtttacaagtataaatctcctcctcc 12210943  T
Q  526 accggtttac 535  Q
    ||| ||||||    
T  12210944 accagtttac 12210953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 494 - 586
Target Start/End: Original strand, 12163311 - 12163403
Alignment:
Q  494 ccaccggtttacaagtataagtcacctcctccaccggtttacaagtataaatctcctccaccaccagtttacaagtacaaatcacctcctcca 586  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12163311 ccaccagtttacaagtacaagtcacctcctccaccagtttacaagtataaatctcctccaccaccagtttacaagtacaaatcacctcctcca 12163403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 332 - 528
Target Start/End: Original strand, 12163971 - 12164158
Alignment:
Q  332 ccacctccagtttacaagtacaaatcacctcctccaccagtgtataagtacaagtctcctcctccaccaccgaagaagccatataaatatccatctccac 431  Q
    ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||| ||||| || |||||||| ||||| ||||| || |||||||| ||||    
T  12163971 ccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccaccacccaagaaaccatacaagtatccatcaccac 12164070  T
Q  432 caccaccagtttacaagtacaagtcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataagtcacctcctccacc 528  Q
    |||||||||||||||| || ||||| ||||||||||| || |||         ||||| |||||||| ||||||||||||||||| |||||||||||    
T  12164071 caccaccagtttacaaatataagtcccctcctccacctgtatac---------tcaccacctccaccagtttacaagtataagtctcctcctccacc 12164158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 326 - 468
Target Start/End: Original strand, 12163710 - 12163852
Alignment:
Q  326 tctcctccacctccagtttacaagtacaaatcacctcctccaccagtgtataagtacaagtctcctcctccaccaccgaagaagccatataaatatccat 425  Q
    ||||||||||| |||||||||||||| || ||||||||||| ||||| || |||||||| ||||| || |||||||| ||||| ||||| || |||||||    
T  12163710 tctcctccaccaccagtttacaagtataagtcacctcctcccccagtttacaagtacaaatctccaccaccaccacccaagaaaccatacaagtatccat 12163809  T
Q  426 ctccaccaccaccagtttacaagtacaagtcacctcctccacc 468  Q
    | ||||||||||||||||||||||| ||||| || ||||||||    
T  12163810 caccaccaccaccagtttacaagtataagtctccccctccacc 12163852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 434 - 559
Target Start/End: Original strand, 12163341 - 12163466
Alignment:
Q  434 ccaccagtttacaagtacaagtcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataagtcacctcctccaccggttt 533  Q
    ||||||||||||||||| || || ||||| ||||| ||||||||||| || ||||||||||||||||| ||||||||||| || ||||||||||| || |    
T  12163341 ccaccagtttacaagtataaatctcctccaccaccagtttacaagtacaaatcacctcctccaccggtgtacaagtataaatcccctcctccaccagtgt 12163440  T
Q  534 acaagtataaatctcctccaccacca 559  Q
    ||||||| || |||||||||||||||    
T  12163441 acaagtacaagtctcctccaccacca 12163466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 398 - 559
Target Start/End: Original strand, 12210666 - 12210827
Alignment:
Q  398 ccaccgaagaagccatataaatatccatctccaccaccaccagtttacaagtacaagtcacctcctccaccggtttacaagtataagtcacctcctccac 497  Q
    ||||| ||||||  ||| ||||| || ||||| ||||||||||| ||||||||||| ||||||||||||||||| || |||||| | || || || ||||    
T  12210666 ccaccaaagaaggaatacaaatacccttctcctccaccaccagtatacaagtacaaatcacctcctccaccggtatataagtatcaatctcccccaccac 12210765  T
Q  498 cggtttacaagtataagtcacctcctccaccggtttacaagtataaatctcctccaccacca 559  Q
    | ||||||||||| |||||||||||||| || ||||||||||| |||||||| || ||||||    
T  12210766 cagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccacccccacca 12210827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 464 - 586
Target Start/End: Original strand, 12163311 - 12163433
Alignment:
Q  464 ccaccggtttacaagtataagtcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataaatctcctccaccaccagttt 563  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||||| ||||| ||||| ||||| || |    
T  12163311 ccaccagtttacaagtacaagtcacctcctccaccagtttacaagtataaatctcctccaccaccagtttacaagtacaaatcacctcctccaccggtgt 12163410  T
Q  564 acaagtacaaatcacctcctcca 586  Q
    ||||||| ||||| |||||||||    
T  12163411 acaagtataaatcccctcctcca 12163433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 424 - 528
Target Start/End: Original strand, 12163361 - 12163465
Alignment:
Q  424 atctccaccaccaccagtttacaagtacaagtcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataagtcacctcct 523  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||| || |||||||| ||||| |||||     
T  12163361 atctcctccaccaccagtttacaagtacaaatcacctcctccaccggtgtacaagtataaatcccctcctccaccagtgtacaagtacaagtctcctcca 12163460  T
Q  524 ccacc 528  Q
    |||||    
T  12163461 ccacc 12163465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 494 - 585
Target Start/End: Original strand, 12163659 - 12163750
Alignment:
Q  494 ccaccggtttacaagtataagtcacctcctccaccggtttacaagtataaatctcctccaccaccagtttacaagtacaaatcacctcctcc 585  Q
    ||||| ||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  12163659 ccaccagtttacaagtacaaatcacctcctcctccagtttacaagtataaatctcctccaccaccagtttacaagtataagtcacctcctcc 12163750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 464 - 576
Target Start/End: Original strand, 12163659 - 12163771
Alignment:
Q  464 ccaccggtttacaagtataagtcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataaatctcctccaccaccagttt 563  Q
    ||||| ||||||||||| || ||||||||||| || |||||||||||||| || ||||| ||||| |||||||||||||| || ||||| || |||||||    
T  12163659 ccaccagtttacaagtacaaatcacctcctcctccagtttacaagtataaatctcctccaccaccagtttacaagtataagtcacctcctcccccagttt 12163758  T
Q  564 acaagtacaaatc 576  Q
    |||||||||||||    
T  12163759 acaagtacaaatc 12163771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 500 - 586
Target Start/End: Original strand, 12163506 - 12163592
Alignment:
Q  500 gtttacaagtataagtcacctcctccaccggtttacaagtataaatctcctccaccaccagtttacaagtacaaatcacctcctcca 586  Q
    ||||||||||| || |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||    
T  12163506 gtttacaagtacaaatcacctccaccaccggtgtacaagtacaaatctcctccaccaccagtttacaagtataaatcccctcctcca 12163592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 488 - 585
Target Start/End: Original strand, 12210696 - 12210793
Alignment:
Q  488 cctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataaatctcctccaccaccagtttacaagtacaaatcacctcctcc 585  Q
    ||||| ||||| || |||||||| || ||||||||||||||||| || |||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  12210696 cctccaccaccagtatacaagtacaaatcacctcctccaccggtatataagtatcaatctcccccaccaccagtttacaagtacaagtcacctcctcc 12210793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 470 - 582
Target Start/End: Original strand, 12163506 - 12163618
Alignment:
Q  470 gtttacaagtataagtcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataaatctcctccaccaccagtttacaagt 569  Q
    ||||||||||| || |||||||| |||||||| |||||||| || || ||||| ||||| ||||||||||||||||| ||||| |||||||| |||||||    
T  12163506 gtttacaagtacaaatcacctccaccaccggtgtacaagtacaaatctcctccaccaccagtttacaagtataaatcccctcctccaccagtgtacaagt 12163605  T
Q  570 acaaatcacctcc 582  Q
    |||| || |||||    
T  12163606 acaagtctcctcc 12163618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 305 - 400
Target Start/End: Original strand, 12163470 - 12163565
Alignment:
Q  305 aagaagccatacaaatacgcttctcctccacctccagtttacaagtacaaatcacctcctccaccagtgtataagtacaagtctcctcctccacca 400  Q
    ||||||||||| |||||| | ||||| ||||| |||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||| ||||||    
T  12163470 aagaagccatataaatacccatctccaccaccgccagtttacaagtacaaatcacctccaccaccggtgtacaagtacaaatctcctccaccacca 12163565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 12163173 - 12163276
Alignment:
Q  395 ccaccaccgaagaagccatataaatatccatctccaccaccaccagtttacaagtacaagtcacctcctccaccggtttacaagtataagtcacctcctc 494  Q
    ||||| || ||||||||||| |||||  | ||||| ||||| ||||||||||||||||| |||||||||||||| || || ||||||||||| |||||||    
T  12163173 ccacctccaaagaagccatacaaatacgcttctcctccacctccagtttacaagtacaaatcacctcctccaccagtgtataagtataagtctcctcctc 12163272  T
Q  495 cacc 498  Q
    ||||    
T  12163273 cacc 12163276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 305 - 462
Target Start/End: Original strand, 12219022 - 12219182
Alignment:
Q  305 aagaagccatacaaatacgcttctcctccacctccagtttacaagtacaaatcacctcctccaccagtgtataagtacaagtctcctcctccacc---ac 401  Q
    |||||||| ||||||||  | || |||||||| ||| | || | |||||| |||||||| |||||  | |||||||||||||||| ||| |||||   ||    
T  12219022 aagaagccctacaaatatccatcacctccaccaccaatatatatgtacaagtcacctccgccaccgatatataagtacaagtctcttccaccaccgccac 12219121  T
Q  402 cgaagaagccatataaatatccatctccaccaccaccagtttacaagtacaagtcacctcc 462  Q
    | |||||||| || |||||||| || || |||||||||||||||||||||||||| |||||    
T  12219122 caaagaagccctacaaatatccgtcacctccaccaccagtttacaagtacaagtctcctcc 12219182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 308 - 400
Target Start/End: Original strand, 12163632 - 12163724
Alignment:
Q  308 aagccatacaaatacgcttctcctccacctccagtttacaagtacaaatcacctcctccaccagtgtataagtacaagtctcctcctccacca 400  Q
    |||||||| |||||| | ||||| ||||| ||||||||||||||||||||||||||||| ||||| || ||||| || |||||||| ||||||    
T  12163632 aagccatataaatacccatctcccccaccaccagtttacaagtacaaatcacctcctcctccagtttacaagtataaatctcctccaccacca 12163724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 12210680 - 12210748
Alignment:
Q  313 atacaaatacgcttctcctccacctccagtttacaagtacaaatcacctcctccaccagtgtataagta 381  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||| || ||||||||    
T  12210680 atacaaatacccttctcctccaccaccagtatacaagtacaaatcacctcctccaccggtatataagta 12210748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 413 - 480
Target Start/End: Original strand, 12163953 - 12164020
Alignment:
Q  413 tataaatatccatctccaccaccaccagtttacaagtacaagtcacctcctccaccggtttacaagta 480  Q
    ||||| || ||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  12163953 tataagtacccatcaccaccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagta 12164020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 10 - 205
Target Start/End: Original strand, 12192020 - 12192217
Alignment:
Q  10 agatgaatagttaagttaaagtgg-taatgaaaaaactatataaagggtgatgctacct--cattacatcaacaacaaaacccactttgggaaaaagatg 106  Q
    |||||||| ||| || |||| ||| ||| ||||||||||||||||||||  | ||| ||  ||| | | |||||||||||| |||||| ||||||  |||    
T  12192020 agatgaattgttgaggtaaaatggataaagaaaaaactatataaagggtactactatctttcataagagcaacaacaaaacacactttaggaaaat-atg 12192118  T
Q  107 gggtctcaaatggcctctattacactcactattgcattggcaataatctctcttgccttgccatcccaaacttcagcaaacagctacatctattcatct 205  Q
     |||  ||||||||||| ||||| || |||||||||||  | ||||||||||||  | |||||||||||| |||||||||||  ||| |||||||||||    
T  12192119 aggttccaaatggcctccattactcttactattgcattcacgataatctctcttagcctgccatcccaaatttcagcaaacaattacgtctattcatct 12192217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 431 - 585
Target Start/End: Original strand, 12163527 - 12163690
Alignment:
Q  431 ccaccaccagtttacaagtacaagtcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataagtcacctcctccaccgg 530  Q
    |||||||| || ||||||||||| || ||||| ||||| |||||||||||||| || ||||||||||| || |||||||| ||||| ||||| |||||      
T  12163527 ccaccaccggtgtacaagtacaaatctcctccaccaccagtttacaagtataaatcccctcctccaccagtgtacaagtacaagtctcctccaccaccac 12163626  T
Q  531 tttacaag---tataaat------ctcctccaccaccagtttacaagtacaaatcacctcctcc 585  Q
       | |||   |||||||      |||| |||||||||||||||||||||||||||||||||||    
T  12163627 caaaaaagccatataaatacccatctcccccaccaccagtttacaagtacaaatcacctcctcc 12163690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 458 - 576
Target Start/End: Original strand, 12210696 - 12210814
Alignment:
Q  458 cctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataaatctcctccaccac 557  Q
    ||||| ||||| || |||||||| || ||||||||||||||||| || |||||| | || || || ||||| ||||||||||| || || ||||| || |    
T  12210696 cctccaccaccagtatacaagtacaaatcacctcctccaccggtatataagtatcaatctcccccaccaccagtttacaagtacaagtcacctcctcccc 12210795  T
Q  558 cagtttacaagtacaaatc 576  Q
    |||||||||||||||||||    
T  12210796 cagtttacaagtacaaatc 12210814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 455 - 565
Target Start/End: Original strand, 12210852 - 12210953
Alignment:
Q  455 tcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataaatctcctccac 554  Q
    ||||| || ||||| ||||||||||||||||| ||||||||||| ||||||         ||||| |||||||| ||||||||||||||||||||||| |    
T  12210852 tcaccaccaccaccagtttacaagtataagtctcctcctccacctgtttac---------tcaccacctccaccagtttacaagtataaatctcctcctc 12210942  T
Q  555 caccagtttac 565  Q
    |||||||||||    
T  12210943 caccagtttac 12210953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 485 - 558
Target Start/End: Original strand, 12164322 - 12164395
Alignment:
Q  485 tcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataaatctcctccaccacc 558  Q
    ||||| || ||||| |||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  12164322 tcaccaccaccacccgtttacaaatataagtcccctcctccaccagtttacaagtataaatctcctcctccacc 12164395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 355 - 499
Target Start/End: Original strand, 12218970 - 12219117
Alignment:
Q  355 atcacctcctccaccagtgtataagtacaagtctcctcctccacc---accgaagaagccatataaatatccatctccaccaccaccagtttacaagtac 451  Q
    ||||||||| |||| | | |||||||||||||||||||| |||||   ||| |||||||| || ||||||||||| || ||||||||| | || | ||||    
T  12218970 atcacctccaccacaaatatataagtacaagtctcctccaccaccgctaccaaagaagccctacaaatatccatcacctccaccaccaatatatatgtac 12219069  T
Q  452 aagtcacctcctccaccggtttacaagtataagtcacctcctccaccg 499  Q
    ||||||||||| |||||| | || ||||| ||||| | ||| ||||||    
T  12219070 aagtcacctccgccaccgatatataagtacaagtctcttccaccaccg 12219117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 356 - 456
Target Start/End: Original strand, 12219145 - 12219248
Alignment:
Q  356 tcacctcctccaccagtgtataagtacaagtctcctcctccacca---ccgaagaagccatataaatatccatctccaccaccaccagtttacaagtaca 452  Q
    |||||||| |||||||| || |||||||||||||||||  |||||   || |||||| | || ||||||||||| || ||||||||||||||||||||||    
T  12219145 tcacctccaccaccagtttacaagtacaagtctcctccgtcaccatcaccaaagaagacctacaaatatccatcacctccaccaccagtttacaagtaca 12219244  T
Q  453 agtc 456  Q
    ||||    
T  12219245 agtc 12219248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 485 - 559
Target Start/End: Original strand, 12163965 - 12164039
Alignment:
Q  485 tcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataaatctcctccaccacca 559  Q
    ||||| || ||||| ||||||||||| |||||||||||||| || ||||||||||| |||||||| |||||||||    
T  12163965 tcaccaccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccacca 12164039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 455 - 528
Target Start/End: Original strand, 12164322 - 12164395
Alignment:
Q  455 tcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagtataagtcacctcctccacc 528  Q
    ||||| || ||||| |||||||| |||||||| ||||||||||| |||||||||||||| || |||||||||||    
T  12164322 tcaccaccaccacccgtttacaaatataagtcccctcctccaccagtttacaagtataaatctcctcctccacc 12164395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 480
Target Start/End: Original strand, 12164211 - 12164278
Alignment:
Q  413 tataaatatccatctccaccaccaccagtttacaagtacaagtcacctcctccaccggtttacaagta 480  Q
    ||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || |||||||||||    
T  12164211 tataagtacccatcaccaccaccgccagtttacaagtacaaatcacctcctcctccagtttacaagta 12164278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 428 - 498
Target Start/End: Original strand, 12179158 - 12179231
Alignment:
Q  428 ccaccaccaccagtttacaagtacaagt---cacctcctccaccggtttacaagtataagtcacctcctccacc 498  Q
    ||||||||||||||||||||||||||||   ||||||| ||||| ||||||||||| ||||| || ||||||||    
T  12179158 ccaccaccaccagtttacaagtacaagtccccacctccaccaccagtttacaagtacaagtccccacctccacc 12179231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 386 - 468
Target Start/End: Original strand, 12211068 - 12211150
Alignment:
Q  386 tctcctcctccaccaccgaagaagccatataaatatccatctccaccaccaccagtttacaagtacaagtcacctcctccacc 468  Q
    ||||| |||||||| || ||||| ||||| || || |||||||||||||| |||||||||||||| || || |||||||||||    
T  12211068 tctccccctccacctccaaagaaaccatacaagtacccatctccaccacccccagtttacaagtataaatctcctcctccacc 12211150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 545 - 586
Target Start/End: Original strand, 12163203 - 12163244
Alignment:
Q  545 tctcctccaccaccagtttacaagtacaaatcacctcctcca 586  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  12163203 tctcctccacctccagtttacaagtacaaatcacctcctcca 12163244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 12179083 - 12179144
Alignment:
Q  308 aagccatacaaatacgcttctcctccacctccagtttacaagtacaaatcacctcctccacc 369  Q
    ||||||||||||||||||||||| ||||| ||||||||||| ||||| || || ||||||||    
T  12179083 aagccatacaaatacgcttctccaccaccaccagtttacaaatacaagtccccacctccacc 12179144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 12192233 - 12192294
Alignment:
Q  308 aagccatacaaatacgcttctcctccacctccagtttacaagtacaaatcacctcctccacc 369  Q
    |||||||||||||||||||| || ||||| |||||||||||||| |||||||| || |||||    
T  12192233 aagccatacaaatacgcttccccaccaccaccagtttacaagtataaatcaccacccccacc 12192294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 545 - 586
Target Start/End: Original strand, 12210693 - 12210734
Alignment:
Q  545 tctcctccaccaccagtttacaagtacaaatcacctcctcca 586  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  12210693 tctcctccaccaccagtatacaagtacaaatcacctcctcca 12210734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 428 - 468
Target Start/End: Original strand, 12192326 - 12192366
Alignment:
Q  428 ccaccaccaccagtttacaagtacaagtcacctcctccacc 468  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  12192326 ccaccaccaccagtttacaagtacaagtcaccccctccacc 12192366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 500 - 559
Target Start/End: Original strand, 12164238 - 12164297
Alignment:
Q  500 gtttacaagtataagtcacctcctccaccggtttacaagtataaatctcctccaccacca 559  Q
    ||||||||||| || ||||||||||| || ||||||||||| |||||||| |||||||||    
T  12164238 gtttacaagtacaaatcacctcctcctccagtttacaagtacaaatctccaccaccacca 12164297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 515 - 586
Target Start/End: Original strand, 12164322 - 12164393
Alignment:
Q  515 tcacctcctccaccggtttacaagtataaatctcctccaccaccagtttacaagtacaaatcacctcctcca 586  Q
    ||||| || ||||| |||||||| ||||| || ||||| ||||||||||||||||| ||||| |||||||||    
T  12164322 tcaccaccaccacccgtttacaaatataagtcccctcctccaccagtttacaagtataaatctcctcctcca 12164393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 544 - 586
Target Start/End: Original strand, 12163301 - 12163343
Alignment:
Q  544 atctcctccaccaccagtttacaagtacaaatcacctcctcca 586  Q
    |||||| ||||||||||||||||||||||| ||||||||||||    
T  12163301 atctccaccaccaccagtttacaagtacaagtcacctcctcca 12163343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 407 - 468
Target Start/End: Original strand, 12179083 - 12179144
Alignment:
Q  407 aagccatataaatatccatctccaccaccaccagtttacaagtacaagtcacctcctccacc 468  Q
    |||||||| |||||  | ||||||||||||||||||||||| |||||||| || ||||||||    
T  12179083 aagccatacaaatacgcttctccaccaccaccagtttacaaatacaagtccccacctccacc 12179144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 369
Target Start/End: Original strand, 12211086 - 12211150
Alignment:
Q  305 aagaagccatacaaatacgcttctcctccacctccagtttacaagtacaaatcacctcctccacc 369  Q
    ||||| |||||||| ||| | ||||| ||||| |||||||||||||| ||||| |||||||||||    
T  12211086 aagaaaccatacaagtacccatctccaccacccccagtttacaagtataaatctcctcctccacc 12211150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 12163524 - 12163595
Alignment:
Q  329 cctccacctccagtttacaagtacaaatcacctcctccaccagtgtataagtacaagtctcctcctccacca 400  Q
    |||||||| || || |||||||||||||| ||||| |||||||| || ||||| || || ||||||||||||    
T  12163524 cctccaccaccggtgtacaagtacaaatctcctccaccaccagtttacaagtataaatcccctcctccacca 12163595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 468
Target Start/End: Original strand, 12163861 - 12163900
Alignment:
Q  429 caccaccaccagtttacaagtacaagtcacctcctccacc 468  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  12163861 caccaccaccagtttacaagtataagtctcctcctccacc 12163900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 510
Target Start/End: Original strand, 12163965 - 12164020
Alignment:
Q  455 tcacctcctccaccggtttacaagtataagtcacctcctccaccggtttacaagta 510  Q
    ||||| || ||||| ||||||||||| |||||||||||||| || |||||||||||    
T  12163965 tcaccaccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagta 12164020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 475
Target Start/End: Original strand, 12179245 - 12179292
Alignment:
Q  428 ccaccaccaccagtttacaagtacaagtcacctcctccaccggtttac 475  Q
    ||||||||||||||||||||||||||||| || | |||||| ||||||    
T  12179245 ccaccaccaccagtttacaagtacaagtccccacgtccacccgtttac 12179292  T

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Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 468
Target Start/End: Original strand, 12211159 - 12211198
Alignment:
Q  429 caccaccaccagtttacaagtacaagtcacctcctccacc 468  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  12211159 caccaccaccaatttacaagtataagtcacctcctccacc 12211198  T

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Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 12163490 - 12163528
Alignment:
Q  544 atctcctccaccaccagtttacaagtacaaatcacctcc 582  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  12163490 atctccaccaccgccagtttacaagtacaaatcacctcc 12163528  T

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Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 551 - 585
Target Start/End: Original strand, 12163971 - 12164005
Alignment:
Q  551 ccaccaccagtttacaagtacaaatcacctcctcc 585  Q
    ||||||||||||||||||||||| |||||||||||    
T  12163971 ccaccaccagtttacaagtacaagtcacctcctcc 12164005  T

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Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 551 - 585
Target Start/End: Original strand, 12164229 - 12164263
Alignment:
Q  551 ccaccaccagtttacaagtacaaatcacctcctcc 585  Q
    ||||| |||||||||||||||||||||||||||||    
T  12164229 ccaccgccagtttacaagtacaaatcacctcctcc 12164263  T

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Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 576
Target Start/End: Original strand, 12164238 - 12164284
Alignment:
Q  530 gtttacaagtataaatctcctccaccaccagtttacaagtacaaatc 576  Q
    ||||||||||| ||||| ||||| || ||||||||||||||||||||    
T  12164238 gtttacaagtacaaatcacctcctcctccagtttacaagtacaaatc 12164284  T

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Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 399
Target Start/End: Original strand, 12164301 - 12164395
Alignment:
Q  305 aagaagccatacaaatacgcttctcctccacctccagtttacaagtacaaatcacctcctccaccagtgtataagtacaagtctcctcctccacc 399  Q
    ||||| |||||||| ||| | || || ||||| || |||||||| || || || |||||||||||||| || ||||| || ||||||||||||||    
T  12164301 aagaaaccatacaagtacccatcaccaccaccacccgtttacaaatataagtcccctcctccaccagtttacaagtataaatctcctcctccacc 12164395  T

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Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 465
Target Start/End: Original strand, 12211009 - 12211051
Alignment:
Q  423 catctccaccaccaccagtttacaagtacaagtcacctcctcc 465  Q
    |||| |||||||||||||| |||||||| ||||||||||||||    
T  12211009 catcaccaccaccaccagtctacaagtataagtcacctcctcc 12211051  T

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Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 576
Target Start/End: Original strand, 12163965 - 12164026
Alignment:
Q  515 tcacctcctccaccggtttacaagtataaatctcctccaccaccagtttacaagtacaaatc 576  Q
    ||||| || ||||| ||||||||||| || || ||||| || ||||||||||||||||||||    
T  12163965 tcaccaccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatc 12164026  T

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Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 399
Target Start/End: Original strand, 12179161 - 12179231
Alignment:
Q  332 ccacctccagtttacaagtacaaat---cacctcctccaccagtgtataagtacaagtctcctcctccacc 399  Q
    ||||| ||||||||||||||||| |   ||||||| |||||||| || ||||||||||| || ||||||||    
T  12179161 ccaccaccagtttacaagtacaagtccccacctccaccaccagtttacaagtacaagtccccacctccacc 12179231  T

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Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 495
Target Start/End: Original strand, 12179395 - 12179435
Alignment:
Q  455 tcacctcctccaccggtttacaagtataagtcacctcctcc 495  Q
    ||||| |||||||| ||||||||||||||||| ||||||||    
T  12179395 tcaccacctccaccagtttacaagtataagtctcctcctcc 12179435  T

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Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 12179395 - 12179435
Alignment:
Q  485 tcacctcctccaccggtttacaagtataagtcacctcctcc 525  Q
    ||||| |||||||| ||||||||||||||||| ||||||||    
T  12179395 tcaccacctccaccagtttacaagtataagtctcctcctcc 12179435  T

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Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 428 - 468
Target Start/End: Original strand, 12192377 - 12192417
Alignment:
Q  428 ccaccaccaccagtttacaagtacaagtcacctcctccacc 468  Q
    ||||| ||||||||||||||||||||||| || ||||||||    
T  12192377 ccacctccaccagtttacaagtacaagtccccacctccacc 12192417  T

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Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 495
Target Start/End: Original strand, 12192476 - 12192516
Alignment:
Q  455 tcacctcctccaccggtttacaagtataagtcacctcctcc 495  Q
    ||||| |||||||| ||||||||||||||||| ||||||||    
T  12192476 tcaccacctccaccagtttacaagtataagtctcctcctcc 12192516  T

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Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 12192476 - 12192516
Alignment:
Q  485 tcacctcctccaccggtttacaagtataagtcacctcctcc 525  Q
    ||||| |||||||| ||||||||||||||||| ||||||||    
T  12192476 tcaccacctccaccagtttacaagtataagtctcctcctcc 12192516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 428 - 468
Target Start/End: Original strand, 12211311 - 12211351
Alignment:
Q  428 ccaccaccaccagtttacaagtacaagtcacctcctccacc 468  Q
    |||||||||||||||||||| || ||||||||||| |||||    
T  12211311 ccaccaccaccagtttacaaatataagtcacctcccccacc 12211351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 12212875 - 12212923
Alignment:
Q  455 tcacctcctccaccggtttacaagtataagtcacctcctccaccggttt 503  Q
    ||||| |||||||| || |||||||||||||| ||||||||||| ||||    
T  12212875 tcaccacctccaccagtatacaagtataagtcccctcctccacctgttt 12212923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 533
Target Start/End: Original strand, 12212875 - 12212923
Alignment:
Q  485 tcacctcctccaccggtttacaagtataagtcacctcctccaccggttt 533  Q
    ||||| |||||||| || |||||||||||||| ||||||||||| ||||    
T  12212875 tcaccacctccaccagtatacaagtataagtcccctcctccacctgttt 12212923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 468
Target Start/End: Complemental strand, 52819250 - 52819208
Alignment:
Q  426 ctccaccaccaccagtttacaagtacaagtcacctcctccacc 468  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||    
T  52819250 ctcctccaacaccagtttacaagtacaagtcaccacctccacc 52819208  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 52819250 - 52819210
Alignment:
Q  546 ctcctccaccaccagtttacaagtacaaatcacctcctcca 586  Q
    |||||||| ||||||||||||||||||| ||||| ||||||    
T  52819250 ctcctccaacaccagtttacaagtacaagtcaccacctcca 52819210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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