View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10536_low_3 (Length: 242)
Name: NF10536_low_3
Description: NF10536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10536_low_3 |
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Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 43705986 - 43705761
Alignment:
| Q |
1 |
gaaacctaatctaaagagagagagtgttgtatggattaatgaatgaaaatgttattatcactcaccacctcgtcttcttccaacacaacataacaccttc |
100 |
Q |
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| T |
43705986 |
gaaacctaatctaaagagagagagtgttgtatggattaatgaatgaaaatgttattatcactcaccacctcgtcttcttccaacacaacataacaccttc |
43705887 |
T |
|
| Q |
101 |
tcatttctttctctttctctaaaaacagttaaaacgtgcaacacactcgtttcttatatcatccaaatctatttatactttatctttctctctcactata |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43705886 |
tcatttctttctctttctctaaaaacagttaaaacgtgcaagacactcgtttcttatatcatccaaatctatttatactttatctttctctctcactata |
43705787 |
T |
|
| Q |
201 |
aatatccctcacttctcaatcattaa |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
43705786 |
aatatccctcacttctcaatcattaa |
43705761 |
T |
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