View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10538_high_12 (Length: 236)
Name: NF10538_high_12
Description: NF10538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10538_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 17 - 217
Target Start/End: Complemental strand, 44730107 - 44729907
Alignment:
| Q |
17 |
aagaacctagaaatgaacaaaaaatatgtcatggttccaatgaaaccagggaagcctgtcggattaagcgccgaagattgtcgtcgaattctttcgatcg |
116 |
Q |
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| T |
44730107 |
aagaacctagaaatgaacaaaaaatatgtcatggttccaatgaaaccagggaagcctgtcggattaagcgccgaagattgtagtcgaattctttcgatcg |
44730008 |
T |
|
| Q |
117 |
ctaactcagctcttaataccaataattatctcatgagctctcaaggctttgttccttggcttgtaaggtttttgaagaaaaagaaagttgaaattggaga |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44730007 |
ctaactcagctcttaataccaataattatctcatgagctctcaaggctttgttccttggcttgtaaggtttttgaagaaaaagaaagttgaaattggaga |
44729908 |
T |
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| Q |
217 |
a |
217 |
Q |
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| T |
44729907 |
a |
44729907 |
T |
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