View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10538_low_13 (Length: 362)
Name: NF10538_low_13
Description: NF10538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10538_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 19 - 348
Target Start/End: Original strand, 34868254 - 34868583
Alignment:
| Q |
19 |
tcttgtgtttctcttgttctacattatgtattgaaattgtgacttagaattgatgatttaatgaaattttggaaattggctacaatgcaaaccaaatgag |
118 |
Q |
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| T |
34868254 |
tcttgtgtttctcttgttctacattatgtattgaaattgtgactcagaattgatgatttaatgaaattttgaaaattggctacaatgcaaaccaaatgag |
34868353 |
T |
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| Q |
119 |
tgaacttctagggaacatagatgctaagggttgagtgtctttggacaccgatgggaaaaaattggtaaatgagtagaaattcaatttgttcatggaaagt |
218 |
Q |
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| T |
34868354 |
tgaacttctagggaacatagatgctaagggttgagtgtctttggacaccgatgggaaaaaattggtaaatgagtagaaattcaatttgttcatggaaagt |
34868453 |
T |
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| Q |
219 |
ttatggaaactaaattattgtaaccccttttgtatcatttgtaaagaaactcattgacaataaagtggagagatctttctcctccagccgtgtatcattg |
318 |
Q |
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| T |
34868454 |
ttatggaaactaatttattgtaaccccttttgaatcatttgtaaagaaactcattgacaataaagtggagagatctttctcctccagccgtgtatcattg |
34868553 |
T |
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| Q |
319 |
ctagaacgaactaaccgaccaaatcttggt |
348 |
Q |
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| T |
34868554 |
ctagaacgaactaaccgaccaaatcttggt |
34868583 |
T |
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