View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10538_low_7 (Length: 453)

Name: NF10538_low_7
Description: NF10538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10538_low_7
NF10538_low_7
[»] chr4 (12 HSPs)
chr4 (12-437)||(29150125-29150550)
chr4 (331-380)||(38853881-38853930)
chr4 (327-380)||(2574822-2574875)
chr4 (331-380)||(3381934-3381983)
chr4 (331-380)||(8658017-8658066)
chr4 (331-380)||(19737503-19737552)
chr4 (331-380)||(20548898-20548947)
chr4 (331-380)||(39744920-39744969)
chr4 (327-380)||(39991415-39991468)
chr4 (331-380)||(50188312-50188361)
chr4 (327-380)||(55081186-55081239)
chr4 (331-380)||(55792727-55792776)
[»] chr5 (13 HSPs)
chr5 (331-382)||(26186138-26186189)
chr5 (337-380)||(23349572-23349615)
chr5 (331-380)||(24956330-24956379)
chr5 (331-380)||(24964790-24964839)
chr5 (331-380)||(25041759-25041808)
chr5 (331-380)||(25526707-25526756)
chr5 (331-380)||(25533389-25533438)
chr5 (331-380)||(28844456-28844505)
chr5 (331-380)||(28853066-28853115)
chr5 (331-380)||(30249841-30249890)
chr5 (331-380)||(36448771-36448820)
chr5 (331-380)||(36455155-36455204)
chr5 (331-380)||(37048884-37048933)
[»] chr1 (12 HSPs)
chr1 (331-382)||(19367986-19368037)
chr1 (326-380)||(9352794-9352848)
chr1 (336-380)||(31064513-31064557)
chr1 (337-380)||(3432393-3432436)
chr1 (337-380)||(51968458-51968501)
chr1 (338-380)||(8770162-8770204)
chr1 (326-380)||(9327948-9328002)
chr1 (331-380)||(2416196-2416245)
chr1 (331-380)||(15473359-15473408)
chr1 (337-382)||(20429887-20429932)
chr1 (331-380)||(47108896-47108945)
chr1 (336-380)||(44832045-44832089)
[»] chr8 (10 HSPs)
chr8 (327-380)||(19950376-19950429)
chr8 (327-380)||(19954830-19954883)
chr8 (331-382)||(32000288-32000339)
chr8 (331-382)||(32007257-32007308)
chr8 (327-380)||(4543779-4543832)
chr8 (327-380)||(21640645-21640698)
chr8 (331-380)||(32025144-32025193)
chr8 (331-380)||(39837063-39837112)
chr8 (331-380)||(39845105-39845154)
chr8 (336-380)||(22156479-22156523)
[»] chr7 (6 HSPs)
chr7 (331-380)||(6851505-6851554)
chr7 (327-380)||(29477742-29477795)
chr7 (331-380)||(44412806-44412855)
chr7 (334-380)||(28415656-28415702)
chr7 (336-380)||(4831839-4831883)
chr7 (336-380)||(6897895-6897939)
[»] chr6 (9 HSPs)
chr6 (331-380)||(20452142-20452191)
chr6 (336-380)||(26896976-26897020)
chr6 (327-377)||(32814555-32814605)
chr6 (331-380)||(19714208-19714257)
chr6 (331-380)||(19899476-19899525)
chr6 (331-380)||(20458959-20459008)
chr6 (331-380)||(22232102-22232151)
chr6 (331-380)||(25506023-25506072)
chr6 (331-379)||(3917086-3917134)
[»] chr3 (15 HSPs)
chr3 (331-380)||(14880807-14880856)
chr3 (331-380)||(14892622-14892671)
chr3 (331-382)||(68673-68724)
chr3 (331-382)||(74766-74817)
chr3 (330-381)||(14398081-14398132)
chr3 (336-395)||(12558375-12558436)
chr3 (331-380)||(8606680-8606729)
chr3 (331-380)||(9524911-9524960)
chr3 (331-380)||(13105135-13105184)
chr3 (331-380)||(13111292-13111341)
chr3 (331-380)||(14887524-14887573)
chr3 (331-380)||(21638054-21638103)
chr3 (331-380)||(23287623-23287672)
chr3 (331-380)||(48060225-48060274)
chr3 (336-380)||(16983519-16983563)
[»] scaffold0085 (1 HSPs)
scaffold0085 (331-380)||(18240-18289)
[»] scaffold0043 (1 HSPs)
scaffold0043 (331-380)||(32720-32769)
[»] scaffold0039 (1 HSPs)
scaffold0039 (331-380)||(89363-89412)
[»] scaffold0031 (1 HSPs)
scaffold0031 (331-380)||(33216-33265)
[»] scaffold0027 (1 HSPs)
scaffold0027 (331-380)||(24110-24159)
[»] chr2 (10 HSPs)
chr2 (331-380)||(5870601-5870650)
chr2 (331-380)||(5873743-5873792)
chr2 (331-380)||(15944038-15944087)
chr2 (331-380)||(15952553-15952602)
chr2 (331-380)||(18500748-18500797)
chr2 (331-380)||(35139129-35139178)
chr2 (331-380)||(35147465-35147514)
chr2 (331-380)||(42565429-42565478)
chr2 (331-380)||(42574053-42574102)
chr2 (336-380)||(18972593-18972637)


Alignment Details
Target: chr4 (Bit Score: 354; Significance: 0; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 12 - 437
Target Start/End: Complemental strand, 29150550 - 29150125
Alignment:
Q  12 gcaaaggttttaaatcaatggacacaatcgtcgatattttagagaatcatggtgtaaataacggagatgtgttggaacaagtgcgggtgtgtgaattgaa 111  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  29150550 gcaaaggttttaaatcaatggacacaattgtcgatatttcagagaatcatggtgtaaataatggagatgtgttggaacaagtgcaggtgtgtgaattgaa 29150451  T
Q  112 aaattcttattttccacgtcgggtagattacatacagcactaatgcttatataggggaggggtcacttttaagggtgtaccatttagggtacacaaattt 211  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29150450 aaattcttattttccacgtcgggtagattacatacaacactaatgtttatataggggagggatcacttttaagggtgtaccatttagggtacacaaattt 29150351  T
Q  212 gtaaatgggtgttgacgcactcaacatgacaacatagaactggacccaaaaatctaatcaattattttttcaaatttttggttttagccctccctaactc 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| ||    
T  29150350 gtaaatgggtgttgacgcactcaacatgacaacatagaactggacccaaaaatctaatcaattattttttcgaatttttggttttggccctccttaagtc 29150251  T
Q  312 atctcttcaaatacatactcacatcaaaagctctcttgagttatcaatgaatttttctctcttctccctttaacttgtcttaacgttctattatgctctt 411  Q
    | ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  29150250 aactcttcaaacacatgctcacatcaaaagctctcttgagttatcaatgaatttttctctcttctccctttaacttgtcttaacgtgctattctgctctt 29150151  T
Q  412 catcttttctttctgcccctattctt 437  Q
    |||||||||||||||| | |||||||    
T  29150150 catcttttctttctgctcatattctt 29150125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 38853881 - 38853930
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| |||||||||||||||||||||    
T  38853881 cacaccaaaagttctcttgagttgtcaaagaatttttctctcttctccct 38853930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 2574822 - 2574875
Alignment:
Q  327 tactcacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||||||| ||||||||||| |||| ||| |||| ||||||||||||    
T  2574822 tacttacatcaaaagttctcttgagttgtcaaagaacttttatctcttctccct 2574875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 3381983 - 3381934
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  3381983 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 3381934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 8658017 - 8658066
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  8658017 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 8658066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 19737552 - 19737503
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  19737552 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 19737503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 20548898 - 20548947
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  20548898 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 20548947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 39744969 - 39744920
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  39744969 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 39744920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 39991415 - 39991468
Alignment:
Q  327 tactcacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||||||| |||||| |||||| |||| |||| ||| |||||||||||||||||    
T  39991415 tactcacaccaaaagttctctttagttgtcaaagaacttttctctcttctccct 39991468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 50188312 - 50188361
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  50188312 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 50188361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 55081186 - 55081239
Alignment:
Q  327 tactcacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    ||||||||  ||||| ||||||||||| |||| || ||||||||||||||||||    
T  55081186 tactcacactaaaagttctcttgagttgtcaaagagtttttctctcttctccct 55081239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 55792776 - 55792727
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||| |||||||||||| ||| |||||||||||||||||    
T  55792776 cacaccaaaagttctattgagttatcaaagaacttttctctcttctccct 55792727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 26186189 - 26186138
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctcccttt 382  Q
    |||| |||||| ||||||||||| |||| |||||||||||||||||||||||    
T  26186189 cacaccaaaagttctcttgagttgtcaaagaatttttctctcttctcccttt 26186138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 380
Target Start/End: Complemental strand, 23349615 - 23349572
Alignment:
Q  337 aaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||    
T  23349615 aaaagttctcttgagttgtcaaagaatttttctctcttctccct 23349572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 24956379 - 24956330
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  24956379 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 24956330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 24964839 - 24964790
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  24964839 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 24964790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 25041808 - 25041759
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  25041808 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 25041759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 25526707 - 25526756
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  25526707 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 25526756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 25533389 - 25533438
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  25533389 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 25533438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 28844456 - 28844505
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  28844456 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 28844505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 28853066 - 28853115
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  28853066 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 28853115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 30249841 - 30249890
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  30249841 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 30249890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 36448771 - 36448820
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  36448771 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 36448820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 36455155 - 36455204
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  36455155 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 36455204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 37048884 - 37048933
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  37048884 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 37048933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 19367986 - 19368037
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctcccttt 382  Q
    |||| |||||| ||||||||||| |||| |||||||||||||||||||||||    
T  19367986 cacaccaaaagttctcttgagttgtcaaagaatttttctctcttctcccttt 19368037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 9352794 - 9352848
Alignment:
Q  326 atactcacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    ||||||||| |||||| ||||||||||| |||| | |||||||||||||||||||    
T  9352794 atactcacaccaaaagttctcttgagttttcaaagcatttttctctcttctccct 9352848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 31064557 - 31064513
Alignment:
Q  336 caaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||||| ||||||||||| |||| |||||||||||||||||||||    
T  31064557 caaaagttctcttgagttgtcaaagaatttttctctcttctccct 31064513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 380
Target Start/End: Complemental strand, 3432436 - 3432393
Alignment:
Q  337 aaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||    
T  3432436 aaaagttctcttgagttgtcaatgaacttttctctcttctccct 3432393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 380
Target Start/End: Original strand, 51968458 - 51968501
Alignment:
Q  337 aaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||    
T  51968458 aaaagttctcttgagttgtcaaagaatttttctctcttctccct 51968501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 380
Target Start/End: Complemental strand, 8770204 - 8770162
Alignment:
Q  338 aaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| ||||||||||| |||| |||||||||||||||||||||    
T  8770204 aaagttctcttgagttgtcaaagaatttttctctcttctccct 8770162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 9327948 - 9328002
Alignment:
Q  326 atactcacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    ||||| ||| |||||| ||||||||||| |||| | |||||||||||||||||||    
T  9327948 atacttacaccaaaagttctcttgagttttcaaagcatttttctctcttctccct 9328002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 2416245 - 2416196
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  2416245 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 2416196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 15473408 - 15473359
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  15473408 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 15473359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 382
Target Start/End: Original strand, 20429887 - 20429932
Alignment:
Q  337 aaaagctctcttgagttatcaatgaatttttctctcttctcccttt 382  Q
    ||||| ||||||||||| |||| ||| |||||||||||||||||||    
T  20429887 aaaagttctcttgagttgtcaaagaacttttctctcttctcccttt 20429932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 47108896 - 47108945
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  47108896 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 47108945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 44832089 - 44832045
Alignment:
Q  336 caaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  44832089 caaaagttctcttgagttgtcaaagaacttttctctcttctccct 44832045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000007; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 380
Target Start/End: Complemental strand, 19950429 - 19950376
Alignment:
Q  327 tactcacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    ||||||| ||||||| ||||||||||| |||| ||| |||||||||||||||||    
T  19950429 tactcacctcaaaagttctcttgagttgtcaaagaacttttctctcttctccct 19950376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 380
Target Start/End: Complemental strand, 19954883 - 19954830
Alignment:
Q  327 tactcacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||||||  |||||| ||||||||||| |||| |||||||||||||||||||||    
T  19954883 tactcaccccaaaagttctcttgagttgtcaaagaatttttctctcttctccct 19954830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 32000288 - 32000339
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctcccttt 382  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||||    
T  32000288 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctcccttt 32000339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 32007257 - 32007308
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctcccttt 382  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||||    
T  32007257 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctcccttt 32007308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 4543779 - 4543832
Alignment:
Q  327 tactcacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||||||  |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  4543779 tactcaccccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 4543832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 21640645 - 21640698
Alignment:
Q  327 tactcacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||||||  |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  21640645 tactcaccccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 21640698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 32025193 - 32025144
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  32025193 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 32025144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 39837112 - 39837063
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  39837112 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 39837063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 39845154 - 39845105
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  39845154 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 39845105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 22156523 - 22156479
Alignment:
Q  336 caaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  22156523 caaaagttctcttgagttgtcaaagaacttttctctcttctccct 22156479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000007; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 6851554 - 6851505
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    ||||||||||| ||||||||||| |||| ||| |||||||||||||||||    
T  6851554 cacatcaaaagttctcttgagttgtcaaagaacttttctctcttctccct 6851505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 29477742 - 29477795
Alignment:
Q  327 tactcacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||||||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  29477742 tactcacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 29477795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 44412855 - 44412806
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| |||||||||||||||||||||    
T  44412855 cacaccaaaagttctcttgagttgtcaaagaatttttctctcttctccct 44412806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 28415656 - 28415702
Alignment:
Q  334 atcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||||||| ||||||||||| |||| ||| |||||||||||||||||    
T  28415656 atcaaaagttctcttgagttgtcaaagaacttttctctcttctccct 28415702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 4831883 - 4831839
Alignment:
Q  336 caaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  4831883 caaaagttctcttgagttgtcaaagaacttttctctcttctccct 4831839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 6897895 - 6897939
Alignment:
Q  336 caaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  6897895 caaaagttctcttgagttgtcaaagaacttttctctcttctccct 6897939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000007; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 20452191 - 20452142
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||||||| |||||||||||||||||    
T  20452191 cacaccaaaagttctcttgagttgtcaatgaacttttctctcttctccct 20452142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 26896976 - 26897020
Alignment:
Q  336 caaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||||| ||||||||||| |||| |||||||||||||||||||||    
T  26896976 caaaagttctcttgagttgtcaaagaatttttctctcttctccct 26897020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 32814555 - 32814605
Alignment:
Q  327 tactcacatcaaaagctctcttgagttatcaatgaatttttctctcttctc 377  Q
    |||||||  |||||| |||||||||||||||| ||| ||||||||||||||    
T  32814555 tactcaccccaaaagttctcttgagttatcaaagaacttttctctcttctc 32814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 19714208 - 19714257
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  19714208 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 19714257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 19899476 - 19899525
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  19899476 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 19899525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 20459008 - 20458959
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  20459008 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 20458959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 22232151 - 22232102
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  22232151 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 22232102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 25506072 - 25506023
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  25506072 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 25506023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 3917134 - 3917086
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccc 379  Q
    |||| |||||| ||||||||||| |||| ||| ||||||||||||||||    
T  3917134 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccc 3917086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000007; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 14880856 - 14880807
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    ||||||||||| ||||||||||| |||| ||| |||||||||||||||||    
T  14880856 cacatcaaaagttctcttgagttgtcaaagaacttttctctcttctccct 14880807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 14892671 - 14892622
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    ||||||||||| ||||||||||| |||| ||| |||||||||||||||||    
T  14892671 cacatcaaaagttctcttgagttgtcaaagaacttttctctcttctccct 14892622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 68673 - 68724
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctcccttt 382  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||||    
T  68673 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctcccttt 68724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 74766 - 74817
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctcccttt 382  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||||    
T  74766 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctcccttt 74817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 381
Target Start/End: Complemental strand, 14398132 - 14398081
Alignment:
Q  330 tcacatcaaaagctctcttgagttatcaatgaatttttctctcttctccctt 381  Q
    |||||||||||| | ||||||||| ||||  |||||||||||||||||||||    
T  14398132 tcacatcaaaagttatcttgagttgtcaaataatttttctctcttctccctt 14398081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 395
Target Start/End: Original strand, 12558375 - 12558436
Alignment:
Q  336 caaaagctctcttgagttatcaatgaatttttctctcttctcc--ctttaacttgtcttaac 395  Q
    |||||| ||||||||||| |||| ||| |||||||||||||||  ||||||||||| |||||    
T  12558375 caaaagttctcttgagttgtcaaagaacttttctctcttctccctctttaacttgtgttaac 12558436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 8606680 - 8606729
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  8606680 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 8606729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 9524960 - 9524911
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  9524960 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 9524911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 13105184 - 13105135
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  13105184 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 13105135  T

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Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 13111341 - 13111292
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  13111341 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 13111292  T

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Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 14887573 - 14887524
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  14887573 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 14887524  T

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Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 21638103 - 21638054
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  21638103 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 21638054  T

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Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 23287672 - 23287623
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  23287672 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 23287623  T

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Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 48060274 - 48060225
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  48060274 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 48060225  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 16983563 - 16983519
Alignment:
Q  336 caaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||||| ||||||||||| ||||  ||||||||||||||||||||    
T  16983563 caaaagttctcttgagttgtcaaataatttttctctcttctccct 16983519  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 18289 - 18240
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  18289 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 18240  T

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Target: scaffold0043 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 32769 - 32720
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||| |||||||||||| ||| |||||||||||||||||    
T  32769 cacaccaaaagttcttttgagttatcaaagaacttttctctcttctccct 32720  T

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Target: scaffold0039 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 89412 - 89363
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  89412 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 89363  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 33265 - 33216
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  33265 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 33216  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 24110 - 24159
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  24110 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 24159  T

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Target: chr2 (Bit Score: 30; Significance: 0.0000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 5870650 - 5870601
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  5870650 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 5870601  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 5873792 - 5873743
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  5873792 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 5873743  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 15944087 - 15944038
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  15944087 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 15944038  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 15952602 - 15952553
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  15952602 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 15952553  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 18500748 - 18500797
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  18500748 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 18500797  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 35139129 - 35139178
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  35139129 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 35139178  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 35147465 - 35147514
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  35147465 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 35147514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 42565478 - 42565429
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  42565478 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 42565429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 42574102 - 42574053
Alignment:
Q  331 cacatcaaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||| |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  42574102 cacaccaaaagttctcttgagttgtcaaagaacttttctctcttctccct 42574053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 18972637 - 18972593
Alignment:
Q  336 caaaagctctcttgagttatcaatgaatttttctctcttctccct 380  Q
    |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  18972637 caaaagttctcttgagttgtcaaagaacttttctctcttctccct 18972593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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