View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10539_low_21 (Length: 340)

Name: NF10539_low_21
Description: NF10539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10539_low_21
NF10539_low_21
[»] chr2 (54 HSPs)
chr2 (1-211)||(9625826-9626036)
chr2 (214-324)||(34983277-34983387)
chr2 (212-324)||(22674787-22674899)
chr2 (212-324)||(38763713-38763825)
chr2 (212-324)||(2249580-2249692)
chr2 (212-324)||(6750053-6750165)
chr2 (212-324)||(13616010-13616122)
chr2 (212-324)||(23869662-23869774)
chr2 (212-324)||(38527173-38527285)
chr2 (212-324)||(44545776-44545888)
chr2 (212-324)||(1115085-1115197)
chr2 (272-324)||(43471501-43471553)
chr2 (210-317)||(28745546-28745655)
chr2 (211-256)||(36436297-36436342)
chr2 (211-324)||(1021115-1021230)
chr2 (272-324)||(16194311-16194363)
chr2 (272-324)||(41699243-41699295)
chr2 (272-324)||(42016562-42016614)
chr2 (274-317)||(17526080-17526123)
chr2 (274-324)||(11935423-11935473)
chr2 (274-324)||(26293221-26293271)
chr2 (278-324)||(44545663-44545709)
chr2 (280-324)||(3836387-3836431)
chr2 (272-324)||(11764853-11764905)
chr2 (272-324)||(19283977-19284029)
chr2 (278-324)||(1114972-1115018)
chr2 (278-324)||(7366329-7366375)
chr2 (278-324)||(11764972-11765018)
chr2 (278-324)||(13615897-13615943)
chr2 (278-324)||(16194430-16194476)
chr2 (278-324)||(26860596-26860642)
chr2 (278-324)||(31392724-31392770)
chr2 (278-324)||(34983454-34983500)
chr2 (278-324)||(38763892-38763938)
chr2 (278-324)||(42016681-42016727)
chr2 (272-317)||(7366210-7366255)
chr2 (272-324)||(12995025-12995077)
chr2 (272-324)||(26860709-26860761)
chr2 (272-324)||(34494522-34494574)
chr2 (285-324)||(2077562-2077601)
chr2 (278-313)||(3836284-3836319)
chr2 (278-313)||(36436127-36436162)
chr2 (218-257)||(42473566-42473605)
chr2 (278-324)||(1021002-1021048)
chr2 (278-324)||(2249759-2249805)
chr2 (278-324)||(6749940-6749986)
chr2 (278-324)||(11935309-11935355)
chr2 (278-324)||(23869841-23869887)
chr2 (278-324)||(26293338-26293384)
chr2 (274-324)||(36436229-36436279)
chr2 (213-245)||(12994975-12995007)
chr2 (272-324)||(31392606-31392658)
chr2 (209-257)||(32099925-32099973)
chr2 (288-324)||(38527361-38527397)
[»] chr5 (41 HSPs)
chr5 (212-324)||(3631258-3631370)
chr5 (211-324)||(26525276-26525389)
chr5 (212-324)||(9737753-9737865)
chr5 (213-324)||(43358410-43358521)
chr5 (211-324)||(8074285-8074399)
chr5 (215-324)||(16823133-16823242)
chr5 (272-324)||(7440527-7440579)
chr5 (214-324)||(43348635-43348745)
chr5 (210-315)||(13013310-13013415)
chr5 (211-324)||(25701467-25701580)
chr5 (217-324)||(29390273-29390380)
chr5 (272-324)||(15374174-15374226)
chr5 (213-324)||(28662117-28662228)
chr5 (212-322)||(19577229-19577338)
chr5 (212-317)||(41084635-41084738)
chr5 (212-324)||(30772878-30772990)
chr5 (272-324)||(9596212-9596264)
chr5 (278-313)||(30773057-30773092)
chr5 (278-324)||(9596099-9596145)
chr5 (212-258)||(26784911-26784957)
chr5 (278-324)||(32304586-32304632)
chr5 (278-323)||(26525164-26525209)
chr5 (280-324)||(7440414-7440458)
chr5 (272-324)||(32304699-32304751)
chr5 (281-313)||(37042611-37042643)
chr5 (278-313)||(3631437-3631472)
chr5 (272-315)||(13084698-13084741)
chr5 (285-324)||(20117489-20117528)
chr5 (274-317)||(30050145-30050188)
chr5 (220-258)||(6229071-6229109)
chr5 (278-312)||(8074184-8074218)
chr5 (278-324)||(10925687-10925733)
chr5 (278-324)||(16823309-16823355)
chr5 (274-324)||(20071260-20071310)
chr5 (274-324)||(20487033-20487083)
chr5 (278-312)||(25701366-25701400)
chr5 (274-316)||(36244239-36244281)
chr5 (278-324)||(43348812-43348858)
chr5 (211-256)||(9596280-9596325)
chr5 (212-257)||(26297122-26297167)
chr5 (280-324)||(26785010-26785054)
[»] chr4 (58 HSPs)
chr4 (211-324)||(6755827-6755940)
chr4 (210-324)||(11651013-11651127)
chr4 (212-324)||(40228477-40228590)
chr4 (214-324)||(2654957-2655067)
chr4 (212-324)||(13233229-13233341)
chr4 (212-324)||(44817596-44817708)
chr4 (272-324)||(13613139-13613191)
chr4 (212-324)||(27270353-27270464)
chr4 (272-324)||(36955057-36955109)
chr4 (274-317)||(9046135-9046178)
chr4 (212-258)||(36584423-36584469)
chr4 (212-313)||(44134493-44134594)
chr4 (212-258)||(51001475-51001521)
chr4 (212-324)||(18491186-18491298)
chr4 (212-324)||(19653691-19653803)
chr4 (272-324)||(43564477-43564529)
chr4 (272-324)||(50767093-50767145)
chr4 (272-324)||(54795776-54795828)
chr4 (273-324)||(4632752-4632803)
chr4 (211-258)||(31664276-31664323)
chr4 (215-315)||(38141613-38141714)
chr4 (212-324)||(31581797-31581909)
chr4 (213-324)||(44745637-44745748)
chr4 (278-324)||(10096390-10096436)
chr4 (278-324)||(13233408-13233454)
chr4 (211-253)||(22647109-22647151)
chr4 (278-324)||(22647289-22647335)
chr4 (278-324)||(36584601-36584647)
chr4 (278-324)||(41832555-41832601)
chr4 (278-324)||(44134671-44134717)
chr4 (212-324)||(16925106-16925217)
chr4 (274-311)||(18735241-18735278)
chr4 (276-324)||(133414-133462)
chr4 (272-324)||(10096503-10096555)
chr4 (288-324)||(13857687-13857723)
chr4 (280-324)||(18491367-18491411)
chr4 (272-324)||(45670019-45670071)
chr4 (285-324)||(10393895-10393934)
chr4 (278-313)||(12700513-12700548)
chr4 (211-254)||(13857611-13857654)
chr4 (278-313)||(31581695-31581730)
chr4 (278-313)||(36954955-36954990)
chr4 (278-324)||(6756007-6756053)
chr4 (278-324)||(13613026-13613072)
chr4 (211-253)||(13869141-13869183)
chr4 (278-324)||(36584488-36584534)
chr4 (286-324)||(36801908-36801946)
chr4 (278-324)||(38141491-38141537)
chr4 (286-324)||(43564604-43564642)
chr4 (286-324)||(44745524-44745562)
chr4 (278-324)||(44817484-44817530)
chr4 (212-258)||(52581455-52581500)
chr4 (280-317)||(7638811-7638848)
chr4 (272-317)||(12700622-12700667)
chr4 (274-311)||(18668990-18669027)
chr4 (274-311)||(18714841-18714878)
chr4 (212-245)||(36955136-36955169)
chr4 (281-317)||(4632645-4632681)
[»] chr7 (50 HSPs)
chr7 (212-324)||(26873702-26873814)
chr7 (215-324)||(44468068-44468177)
chr7 (212-324)||(46027679-46027791)
chr7 (212-317)||(23562701-23562806)
chr7 (212-324)||(36358357-36358469)
chr7 (212-324)||(44724110-44724222)
chr7 (272-324)||(9624055-9624107)
chr7 (211-324)||(45350050-45350162)
chr7 (216-324)||(17166869-17166977)
chr7 (212-324)||(36675534-36675646)
chr7 (272-324)||(44142821-44142873)
chr7 (278-324)||(44467955-44468001)
chr7 (212-324)||(43859090-43859202)
chr7 (272-324)||(22723823-22723875)
chr7 (272-324)||(31065670-31065722)
chr7 (272-324)||(31428796-31428848)
chr7 (272-324)||(31931958-31932010)
chr7 (278-313)||(36358255-36358290)
chr7 (278-324)||(17167045-17167091)
chr7 (286-324)||(22566627-22566665)
chr7 (278-324)||(22723710-22723756)
chr7 (278-324)||(23469330-23469376)
chr7 (278-324)||(29075119-29075165)
chr7 (278-324)||(31065557-31065603)
chr7 (278-324)||(31428915-31428961)
chr7 (278-324)||(36675421-36675467)
chr7 (278-324)||(42241863-42241909)
chr7 (278-324)||(44142939-44142985)
chr7 (278-324)||(44723997-44724043)
chr7 (212-257)||(29662932-29662977)
chr7 (272-324)||(29075232-29075284)
chr7 (274-313)||(8461760-8461799)
chr7 (215-258)||(16834390-16834433)
chr7 (272-323)||(18104367-18104417)
chr7 (212-255)||(19692467-19692510)
chr7 (274-325)||(30781072-30781123)
chr7 (278-313)||(40055769-40055804)
chr7 (278-313)||(45350229-45350264)
chr7 (278-313)||(46027858-46027893)
chr7 (278-324)||(9624174-9624220)
chr7 (286-324)||(23469443-23469481)
chr7 (274-324)||(29502179-29502229)
chr7 (278-324)||(39976499-39976545)
chr7 (274-324)||(40883343-40883393)
chr7 (216-257)||(8727725-8727766)
chr7 (216-257)||(29502246-29502287)
chr7 (288-324)||(6961122-6961158)
chr7 (212-248)||(9014391-9014427)
chr7 (272-324)||(39976380-39976432)
chr7 (272-324)||(42241976-42242028)
[»] chr3 (45 HSPs)
chr3 (212-324)||(29126091-29126203)
chr3 (212-324)||(52201981-52202093)
chr3 (212-324)||(18163717-18163829)
chr3 (212-324)||(13594921-13595033)
chr3 (212-317)||(7160345-7160450)
chr3 (212-324)||(50527681-50527793)
chr3 (212-324)||(52571472-52571584)
chr3 (272-324)||(4618210-4618262)
chr3 (212-315)||(36633486-36633589)
chr3 (212-317)||(12251562-12251667)
chr3 (212-305)||(16908875-16908968)
chr3 (215-324)||(22729222-22729331)
chr3 (212-324)||(28952439-28952551)
chr3 (212-324)||(49169792-49169904)
chr3 (218-324)||(1092925-1093031)
chr3 (278-324)||(35083971-35084017)
chr3 (278-324)||(45045388-45045434)
chr3 (278-324)||(49657146-49657192)
chr3 (282-324)||(52499245-52499287)
chr3 (272-313)||(44205471-44205512)
chr3 (272-324)||(44254648-44254700)
chr3 (278-313)||(1092823-1092858)
chr3 (277-324)||(11232202-11232249)
chr3 (278-324)||(11232089-11232135)
chr3 (278-324)||(13594808-13594854)
chr3 (278-324)||(22729398-22729444)
chr3 (278-324)||(32270854-32270900)
chr3 (278-324)||(44254535-44254581)
chr3 (278-324)||(50527568-50527614)
chr3 (278-324)||(52202160-52202206)
chr3 (272-317)||(21259489-21259534)
chr3 (272-313)||(25246283-25246324)
chr3 (272-324)||(27742545-27742597)
chr3 (272-324)||(45045268-45045320)
chr3 (217-252)||(7441702-7441737)
chr3 (215-258)||(32271031-32271074)
chr3 (211-253)||(2618883-2618925)
chr3 (278-324)||(16908753-16908799)
chr3 (286-324)||(28952326-28952364)
chr3 (278-324)||(29125978-29126024)
chr3 (286-324)||(32270967-32271005)
chr3 (274-324)||(34660807-34660857)
chr3 (278-324)||(36633665-36633711)
chr3 (281-324)||(2618953-2618994)
chr3 (276-324)||(31174607-31174655)
[»] chr1 (50 HSPs)
chr1 (212-324)||(919756-919868)
chr1 (212-324)||(6849752-6849864)
chr1 (212-324)||(16692995-16693107)
chr1 (209-324)||(44052505-44052620)
chr1 (210-324)||(33012103-33012217)
chr1 (212-317)||(8530082-8530187)
chr1 (212-313)||(17285351-17285452)
chr1 (212-315)||(29169941-29170044)
chr1 (272-324)||(51139745-51139797)
chr1 (212-314)||(37125692-37125794)
chr1 (212-324)||(29981753-29981865)
chr1 (212-324)||(47561726-47561838)
chr1 (277-324)||(9246947-9246994)
chr1 (278-324)||(42372148-42372194)
chr1 (278-324)||(46224693-46224739)
chr1 (212-324)||(42371969-42372081)
chr1 (272-324)||(24544764-24544816)
chr1 (272-324)||(40428827-40428879)
chr1 (272-324)||(44317626-44317678)
chr1 (272-324)||(45836903-45836955)
chr1 (278-324)||(919643-919689)
chr1 (278-324)||(8086408-8086454)
chr1 (212-258)||(9042530-9042576)
chr1 (222-315)||(23177351-23177444)
chr1 (278-324)||(24790613-24790659)
chr1 (278-324)||(25299021-25299067)
chr1 (278-324)||(29981640-29981686)
chr1 (274-324)||(32540640-32540690)
chr1 (278-324)||(40428714-40428760)
chr1 (278-324)||(40567144-40567190)
chr1 (278-324)||(45837022-45837068)
chr1 (278-324)||(48708350-48708396)
chr1 (274-315)||(46224815-46224856)
chr1 (272-313)||(48708474-48708515)
chr1 (212-253)||(48708535-48708576)
chr1 (272-324)||(8086289-8086341)
chr1 (214-254)||(37343027-37343067)
chr1 (213-257)||(46224874-46224918)
chr1 (277-324)||(25299134-25299181)
chr1 (278-313)||(37125871-37125906)
chr1 (289-324)||(40567042-40567077)
chr1 (278-313)||(44317745-44317780)
chr1 (278-324)||(16692882-16692928)
chr1 (220-258)||(17879973-17880011)
chr1 (286-324)||(23177528-23177566)
chr1 (211-324)||(24790433-24790546)
chr1 (278-324)||(33011990-33012036)
chr1 (278-324)||(47561905-47561951)
chr1 (209-258)||(43532470-43532519)
chr1 (212-245)||(45836854-45836887)
[»] chr8 (51 HSPs)
chr8 (210-324)||(41838002-41838116)
chr8 (272-324)||(2317121-2317173)
chr8 (209-324)||(24797101-24797216)
chr8 (210-317)||(3659877-3659984)
chr8 (272-324)||(7413091-7413143)
chr8 (273-324)||(10092315-10092366)
chr8 (210-257)||(34934370-34934417)
chr8 (212-317)||(3886835-3886940)
chr8 (215-324)||(5590221-5590330)
chr8 (212-317)||(9830607-9830712)
chr8 (209-324)||(38567124-38567241)
chr8 (272-324)||(7242682-7242734)
chr8 (272-324)||(7422096-7422148)
chr8 (272-324)||(42556141-42556193)
chr8 (272-324)||(43117408-43117460)
chr8 (274-324)||(1183884-1183934)
chr8 (278-324)||(4697985-4698031)
chr8 (275-324)||(197265-197314)
chr8 (275-324)||(312102-312151)
chr8 (212-324)||(4231220-4231331)
chr8 (213-317)||(6316877-6316981)
chr8 (272-317)||(28564944-28564989)
chr8 (272-317)||(28572567-28572612)
chr8 (213-253)||(1183823-1183863)
chr8 (272-324)||(21434899-21434951)
chr8 (272-324)||(22658394-22658446)
chr8 (276-324)||(38567306-38567354)
chr8 (278-313)||(10092433-10092468)
chr8 (278-324)||(3886715-3886761)
chr8 (278-324)||(5590108-5590154)
chr8 (212-250)||(7012337-7012375)
chr8 (278-324)||(7012516-7012562)
chr8 (278-324)||(22658281-22658327)
chr8 (278-324)||(36060536-36060582)
chr8 (278-324)||(42556028-42556074)
chr8 (278-324)||(43117528-43117574)
chr8 (212-257)||(11635758-11635803)
chr8 (272-317)||(36060417-36060462)
chr8 (212-315)||(1098057-1098160)
chr8 (272-324)||(41388065-41388117)
chr8 (281-324)||(25642780-25642823)
chr8 (274-317)||(32018030-32018073)
chr8 (278-324)||(1184001-1184047)
chr8 (278-324)||(2317240-2317286)
chr8 (286-324)||(7242570-7242608)
chr8 (278-324)||(21435018-21435064)
chr8 (278-324)||(28565063-28565109)
chr8 (278-324)||(28572686-28572732)
chr8 (278-324)||(41388184-41388230)
chr8 (272-324)||(11635819-11635871)
chr8 (278-322)||(41169877-41169921)
[»] scaffold0050 (2 HSPs)
scaffold0050 (215-324)||(19048-19157)
scaffold0050 (278-324)||(19224-19270)
[»] scaffold0014 (3 HSPs)
scaffold0014 (212-324)||(64933-65045)
scaffold0014 (278-324)||(65226-65272)
scaffold0014 (278-324)||(65112-65158)
[»] chr6 (28 HSPs)
chr6 (212-324)||(12698493-12698606)
chr6 (212-324)||(2660885-2660997)
chr6 (212-324)||(24635517-24635629)
chr6 (274-324)||(13405410-13405460)
chr6 (212-324)||(11450551-11450667)
chr6 (272-324)||(26468508-26468560)
chr6 (211-324)||(9079102-9079215)
chr6 (278-324)||(12996464-12996510)
chr6 (212-324)||(16461456-16461568)
chr6 (272-324)||(15469149-15469201)
chr6 (214-258)||(24130352-24130396)
chr6 (272-324)||(34023589-34023641)
chr6 (278-324)||(7021996-7022042)
chr6 (278-324)||(15469268-15469314)
chr6 (278-324)||(34023476-34023522)
chr6 (277-317)||(7021882-7021922)
chr6 (272-324)||(8560485-8560537)
chr6 (212-256)||(10290457-10290501)
chr6 (272-324)||(12996343-12996395)
chr6 (272-324)||(34127557-34127609)
chr6 (278-313)||(2660783-2660818)
chr6 (274-317)||(7536518-7536561)
chr6 (278-313)||(8560604-8560639)
chr6 (278-313)||(26468627-26468662)
chr6 (272-314)||(14883219-14883261)
chr6 (278-324)||(34127676-34127722)
chr6 (216-257)||(13405477-13405518)
chr6 (288-324)||(1398152-1398188)
[»] scaffold0131 (3 HSPs)
scaffold0131 (212-256)||(11166-11210)
scaffold0131 (272-324)||(11237-11289)
scaffold0131 (278-324)||(11356-11402)
[»] scaffold0002 (2 HSPs)
scaffold0002 (278-313)||(331950-331985)
scaffold0002 (272-324)||(331831-331883)
[»] scaffold0978 (1 HSPs)
scaffold0978 (286-324)||(1290-1328)
[»] scaffold0041 (1 HSPs)
scaffold0041 (274-324)||(82891-82941)
[»] scaffold0003 (1 HSPs)
scaffold0003 (274-324)||(303865-303915)


Alignment Details
Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 9626036 - 9625826
Alignment:
Q  1 taatgttcacgtgcagattcaccatgaatttggcggattcatagtgtattatcgtgattttgacaaaagttcaaattcaagcatggaccaaagcatctca 100  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9626036 taatgttcacgtgtagattcaccataaatttggcggattcatagtgtattatcgtgattttgacaaaagttcaaattcaagcatggaccaaagcatctca 9625937  T
Q  101 attctcatcgaaatatccactccgagcctggaattttatgtaattaaacaatgaatttactaaatgttcccgaacctcgactgaaccaagggcacaatcc 200  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9625936 attctcatcgaaatatccactccaagactggaattttatgtaattaaacaatgaatttactaaatgttcccgaacctcgactgaaccaagggcacaatcc 9625837  T
Q  201 tcggccccaac 211  Q
    | |||||||||    
T  9625836 ttggccccaac 9625826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 214 - 324
Target Start/End: Original strand, 34983277 - 34983387
Alignment:
Q  214 gtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatttt 313  Q
    ||||||||||||||| |||||||||||||||||||||||||||||             ||||||||||||| |||||||||||||||||||| |||||||    
T  34983277 gtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattgaaaaatcaacgattataggtctattttgcgagattttatgcaatttt 34983376  T
Q  314 gtgttggtttt 324  Q
    |||| ||||||    
T  34983377 gtgtcggtttt 34983387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 22674899 - 22674787
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||             ||||||||||||| |||||||||||||||||||| |||||    
T  22674899 cagtggcggagcccttcatgggctggggtggaccacggcccacccggaaaaattaaaaaatcaacgattataggtctattttgcgagattttatgcaatt 22674800  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  22674799 ttgtgtcggtttt 22674787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 38763713 - 38763825
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||             ||||||||||||| ||||||| |||||||||||| |||||    
T  38763713 cagtggcggagcccttcatgggctgaggtgggccacggcccacccggaaaaattaaaaaatcaacgattataggtctatttagcgagattttatgcaatt 38763812  T
Q  312 ttgtgttggtttt 324  Q
    |||||||||||||    
T  38763813 ttgtgttggtttt 38763825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 2249580 - 2249692
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||              |||| ||||||||||||||||||||||||||||| |||||    
T  2249580 cagtggcggagcccttcatgggctggggtgggccacgacccacccgaaaaaattaaaaaatcaatgattatagatctattttgcgagattttatgcaatt 2249679  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  2249680 ttgtgtcggtttt 2249692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 6750165 - 6750053
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||             ||||||||||||| |||||||   |||||||||| |||||    
T  6750165 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaatttaaaaatcaacgattataggtctatttattgagattttatgcaatt 6750066  T
Q  312 ttgtgttggtttt 324  Q
    |||||||||||||    
T  6750065 ttgtgttggtttt 6750053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 13616122 - 13616010
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||||             ||||||||||||| |||||||||||||||||||| |||||    
T  13616122 cagtggcggagtctttcatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgattataggtctattttgcgagattttatgcaatt 13616023  T
Q  312 ttgtgttggtttt 324  Q
    |||||||| ||||    
T  13616022 ttgtgttgttttt 13616010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 23869662 - 23869774
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| |             ||||||||||||| |||||||||||||||||||| |||||    
T  23869662 cagtggcggagccctccatgggctggggtgggccacggcccaccccgaaaaattaaaaaatcaacgattataggtctattttgcgagattttatgcaatt 23869761  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  23869762 ttgtgtcggtttt 23869774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 38527173 - 38527285
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||             ||||||||||||| ||||||||| |||||||||| |||||    
T  38527173 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaataaaaaaatcaacgattataggtctattttgtgagattttatgcaatt 38527272  T
Q  312 ttgtgttggtttt 324  Q
    |||| | ||||||    
T  38527273 ttgtatcggtttt 38527285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 44545888 - 44545776
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||| ||||||||||||||| ||||||||             ||||||||||||| |||||||||||| |||||||||||||    
T  44545888 cagtggcggagcccttcatgggttggggtgggccacggtccacccggaaaaataaaaaaatcaacgattataggtctattttgcgatattttatacaatt 44545789  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  44545788 ttgtgtcggtttt 44545776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 1115197 - 1115085
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||             ||||  ||||||| ||||||||||||||||||||||||||    
T  1115197 cagtggcggagcccttcatgggctggggtgggccacggtccactcggaaaaattaaaaaatcaattattataggtctattttgcgagattttatacaatt 1115098  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  1115097 ttgtgtcggtttt 1115085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 43471553 - 43471501
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  43471553 tcaacgattataggtctattttgcgagattttatacaattttgtgtcggtttt 43471501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 317
Target Start/End: Complemental strand, 28745655 - 28745546
Alignment:
Q  210 accagtggcggagcccttcctgggctggggtgggccacggccca--cccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatac 307  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  |||||             | ||||||||||| |||||||||||||||||||| |    
T  28745655 accagtggcggagcccttcatgggctggggtgggccacggcccacccccgggaaaattaaaaaattaacgattataggtctattttgcgagattttatgc 28745556  T
Q  308 aattttgtgt 317  Q
    ||||||||||    
T  28745555 aattttgtgt 28745546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 36436342 - 36436297
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggcccaccc 256  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  36436342 ccagtggcggagcccttcatgggctggggtgggccacggcccaccc 36436297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 324
Target Start/End: Complemental strand, 1021230 - 1021115
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggccc-acccg-gnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttataca 308  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||| |             ||||  ||||||| |||||||||||||||||||||||    
T  1021230 ccagtggcggagcccttcatgggctggggtgggccacggccccacccgagaaaaattaaaaaatcaattattataggtctattttgcgagattttataca 1021131  T
Q  309 attttgtgttggtttt 324  Q
    ||||||||| ||||||    
T  1021130 attttgtgtcggtttt 1021115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 16194311 - 16194363
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  16194311 tcaacgattataagtctattttgcgagattttatgcaattttgtgttggtttt 16194363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 41699243 - 41699295
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  41699243 tcaacgattataggtatattttgcgagattttatgcaattttgtgttggtttt 41699295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 42016562 - 42016614
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  42016562 tcaacgattataggtctattttgtgagattttatgcaattttgtgttggtttt 42016614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 17526123 - 17526080
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgt 317  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  17526123 aacgattatagatctattttgcgagattttatacaatttagtgt 17526080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 11935473 - 11935423
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  11935473 aacgattataagtctattttgcgagattttatacaattttgtgtcggtttt 11935423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 26293221 - 26293271
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  26293221 aacgattataggtctattttgcgagattttatgcaattttgtgtcggtttt 26293271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 44545709 - 44545663
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  44545709 attataggtctattttgcgagattttatacaattttatgttggtttt 44545663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 3836431 - 3836387
Alignment:
Q  280 tatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||    
T  3836431 tatagatctattttacgagattttatacaattttgtgtcggtttt 3836387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 11764853 - 11764905
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||    
T  11764853 tcaacgattataggtctattttgcaagattttatacaactttgtgtcggtttt 11764905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 19284029 - 19283977
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| | ||||||    
T  19284029 tcaacgattataaatctattttgcgagattttatgcaattttgtatcggtttt 19283977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 1115018 - 1114972
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  1115018 attataggtctattttgcgagattttatacaattttatgttgatttt 1114972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 7366329 - 7366375
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||    
T  7366329 attatacatctattttgcgagattttatacaattttatgtcggtttt 7366375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 11764972 - 11765018
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  11764972 attataggtctattttgcgagattttatacaattttatgtcggtttt 11765018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 13615943 - 13615897
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  13615943 attataggtctattttgcgagattttatacaattttatgtcggtttt 13615897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 16194430 - 16194476
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  16194430 attataggtctattttgcgagattttatacaattttatgtcggtttt 16194476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 26860642 - 26860596
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  26860642 attataggtctattttgcgagattttatacaattttatgtcggtttt 26860596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 31392724 - 31392770
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  31392724 attataggtctattttgcgagattttatacaattttatgtcggtttt 31392770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 34983454 - 34983500
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  34983454 attataggtctattttgcgagattttatacaattttatgtcggtttt 34983500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 38763892 - 38763938
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  38763892 attataggtctattttgcgagattttatacaattttatgtcggtttt 38763938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 42016681 - 42016727
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  42016681 attataggtctattttgcgagattttatacaattttatgtcggtttt 42016727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 7366210 - 7366255
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgt 317  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||||    
T  7366210 tcaacgactataggtctattttgcgagattttatgcaattttgtgt 7366255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 12995025 - 12995077
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||| | ||||||    
T  12995025 tcaacgattataggtctaatttgcgagattttatgcaattttgtatcggtttt 12995077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 26860761 - 26860709
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||| ||||||| |||||||||||||||||||| |||||| |||| ||||||    
T  26860761 tcaacaattataggtctattttgcgagattttatgcaatttcgtgtcggtttt 26860709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 34494574 - 34494522
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||| | ||||||    
T  34494574 tcaacgattataggtctcttttgcgagattttatgcaattttgtatcggtttt 34494522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 2077562 - 2077601
Alignment:
Q  285 atctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  2077562 atctattttgcgagattctatacaattttgtgtcggtttt 2077601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Complemental strand, 3836319 - 3836284
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||||||||||||| ||||||||||||||||||    
T  3836319 attatagatctattttgtgagattttatacaatttt 3836284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Complemental strand, 36436162 - 36436127
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  36436162 attataggtctattttgcgagattttatacaatttt 36436127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 42473566 - 42473605
Alignment:
Q  218 cggagcccttcctgggctggggtgggccacggcccacccg 257  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  42473566 cggagcccttcatgggctggggtgggccacggctcacccg 42473605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 1021048 - 1021002
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| ||||||||| |||||||||||||||||| ||| ||||||    
T  1021048 attataggtctattttgagagattttatacaattttatgtcggtttt 1021002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 2249759 - 2249805
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||| ||||| ||| ||||||    
T  2249759 attataggtctattttgcgagattttatacgattttatgtcggtttt 2249805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 6749986 - 6749940
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||| ||||||||||||||| ||| ||||||    
T  6749986 attataggtctattttgcgatattttatacaattttatgtcggtttt 6749940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 11935355 - 11935309
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| ||||||||||||| |||||||||||||| ||| ||||||    
T  11935355 attataggtctattttgcgaggttttatacaattttatgtcggtttt 11935309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 23869841 - 23869887
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| | |||||||||||||||||||||||||| ||| ||||||    
T  23869841 attataggtatattttgcgagattttatacaattttatgtcggtttt 23869887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 26293338 - 26293384
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||| ||||| ||| ||||||    
T  26293338 attataggtctattttgcgagattttatacgattttatgtcggtttt 26293384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 36436279 - 36436229
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||  |||||||||||| ||||||| ||||||||||| ||||||    
T  36436279 aacgattataagtctattttgcgatattttatgcaattttgtgtcggtttt 36436229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 12994975 - 12995007
Alignment:
Q  213 agtggcggagcccttcctgggctggggtgggcc 245  Q
    |||||||||||||||| ||||||||||||||||    
T  12994975 agtggcggagcccttcatgggctggggtgggcc 12995007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 31392606 - 31392658
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||  |||||||||  ||||||||| ||||||||||| ||||||    
T  31392606 tcaacgattataagtctattttgttagattttatgcaattttgtgtcggtttt 31392658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 32099925 - 32099973
Alignment:
Q  209 aaccagtggcggagcccttcctgggctggggtgggccacggcccacccg 257  Q
    ||||||||| |||||||||| |||||| |||||||||||  ||||||||    
T  32099925 aaccagtggtggagcccttcatgggctagggtgggccacaacccacccg 32099973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 324
Target Start/End: Original strand, 38527361 - 38527397
Alignment:
Q  288 tattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  38527361 tattttgcgagattttatacaattttatgtcggtttt 38527397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 9e-27; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 3631258 - 3631370
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||             ||||||||||||| |||||||||||||||||||| |||||    
T  3631258 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgattataggtctattttgcgagattttatgcaatt 3631357  T
Q  312 ttgtgttggtttt 324  Q
    |||||||||||||    
T  3631358 ttgtgttggtttt 3631370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 324
Target Start/End: Complemental strand, 26525389 - 26525276
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaat 310  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||             ||||||||||||| |||||||||||||||||| | ||||    
T  26525389 ccagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaataaaaaaatcaacgattataggtctattttgcgagattttttgcaat 26525290  T
Q  311 tttgtgttggtttt 324  Q
    ||||||| ||||||    
T  26525289 tttgtgtcggtttt 26525276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 9737865 - 9737753
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||             | ||||||||||| |||||||||||||||||||| |||||    
T  9737865 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattaaaaaattaacgattataggtctattttgcgagattttatgcaatt 9737766  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  9737765 ttgtgtcggtttt 9737753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 324
Target Start/End: Original strand, 43358410 - 43358521
Alignment:
Q  213 agtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaattt 312  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||             ||||||||||||| |||||||||||||||||||| ||||||    
T  43358410 agtggcggagcccttcatgggctgaggtgggccacggcccacccggaaaaatgaaaaaatcaacgattataggtctattttgcgagattttatgcaattt 43358509  T
Q  313 tgtgttggtttt 324  Q
    ||||| ||||||    
T  43358510 tgtgtcggtttt 43358521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 211 - 324
Target Start/End: Complemental strand, 8074399 - 8074285
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnn-tcaacgattatagatctattttgcgagattttatacaa 309  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||              ||||||||||||| ||||||||||||||||||||||||    
T  8074399 ccagtggcggagcccttcatgggctggggtgggccacggcccacctggaaaattttaaaaaatcaacgattataggtctattttgcgagattttatacaa 8074300  T
Q  310 ttttgtgttggtttt 324  Q
    |||||||| ||||||    
T  8074299 ttttgtgtcggtttt 8074285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 324
Target Start/End: Original strand, 16823133 - 16823242
Alignment:
Q  215 tggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaattttg 314  Q
    |||||||||||||| |||||||||||||||||||||||| ||||             ||||||||||||| |||||||||||||||||||| ||||||||    
T  16823133 tggcggagcccttcatgggctggggtgggccacggcccatccggaaaaattaaaaaatcaacgattataggtctattttgcgagattttatgcaattttg 16823232  T
Q  315 tgttggtttt 324  Q
    ||| ||||||    
T  16823233 tgtcggtttt 16823242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 7440579 - 7440527
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7440579 tcaacgattatagatctattttgcgagattttatgcaattttgtgttggtttt 7440527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 324
Target Start/End: Original strand, 43348635 - 43348745
Alignment:
Q  214 gtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatttt 313  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||             | ||||||||||| | |||||||||||||||||| |||||||    
T  43348635 gtggcggagcccttcatgggctggggcgggccacggcccacccggaaaaattaaaaaattaacgattataggtttattttgcgagattttatgcaatttt 43348734  T
Q  314 gtgttggtttt 324  Q
    |||||||||||    
T  43348735 gtgttggtttt 43348745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 210 - 315
Target Start/End: Complemental strand, 13013415 - 13013310
Alignment:
Q  210 accagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaa 309  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||             ||||||||||||| |||| ||||||||||||||  |||    
T  13013415 accagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgattataggtctaatttgcgagattttaagcaa 13013316  T
Q  310 ttttgt 315  Q
    ||||||    
T  13013315 ttttgt 13013310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 211 - 324
Target Start/End: Complemental strand, 25701580 - 25701467
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaat 310  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||             |||||||||||||||||||||||| |||||||||  |||    
T  25701580 ccagtggcggagcccttcatgggctggggtgggccacggcccatccggaaaaattaaaaaatcaacgattatagatctattttgcaagattttatgtaat 25701481  T
Q  311 tttgtgttggtttt 324  Q
    ||||| | ||||||    
T  25701480 tttgtatcggtttt 25701467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 29390273 - 29390380
Alignment:
Q  217 gcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaattttgtg 316  Q
    |||||||||||| |||||||||||||||||||||||||| ||             ||||||||||||| | |||||| ||||||||||| ||||||||||    
T  29390273 gcggagcccttcatgggctggggtgggccacggcccacctggaaaaattaaaaaatcaacgattataggtgtattttacgagattttatgcaattttgtg 29390372  T
Q  317 ttggtttt 324  Q
    ||||||||    
T  29390373 ttggtttt 29390380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 15374174 - 15374226
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  15374174 tcaacgattataggtctattttgcgagattttatgcaattttgtgtcggtttt 15374226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 324
Target Start/End: Original strand, 28662117 - 28662228
Alignment:
Q  213 agtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaattt 312  Q
    |||||||||||||||  |||||||||||||||||||||||||||||             | ||| |  ||||||||||||| ||||||||||||||||||    
T  28662117 agtggcggagccctttatgggctggggtgggccacggcccacccggaaaaattaaaaaattaaccaccatagatctattttacgagattttatacaattt 28662216  T
Q  313 tgtgttggtttt 324  Q
    |||||| |||||    
T  28662217 tgtgttagtttt 28662228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 19577338 - 19577229
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||             | |||||||||||||||||||||| | |||||||||||||    
T  19577338 cagtggcggagcccttcatgggctaaggtgggccacggcccacccggaaaaataaaaaatt-aacgattatagatctattttgcaacattttatacaatt 19577240  T
Q  312 ttgtgttggtt 322  Q
    |||||| ||||    
T  19577239 ttgtgtcggtt 19577229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 41084738 - 41084635
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||||||||||||||  || ||||||||             ||||||||||||| ||||||||||||||||||||| ||||    
T  41084738 cagtggcggagcccttcatgggctggggtgggcc--ggtccacccggaaaaattaaaaaatcaacgattataggtctattttgcgagattttatagaatt 41084641  T
Q  312 ttgtgt 317  Q
    ||||||    
T  41084640 ttgtgt 41084635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 30772878 - 30772990
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||| |||||||||||||||| ||||||              ||||||||||||| |||||||||| ||||||||| |||||    
T  30772878 cagtggcggagcccttcatgggttggggtgggccacggctcacccgaaaaaattaaaaaatcaacgattataggtctattttgcaagattttatgcaatt 30772977  T
Q  312 ttgtgttggtttt 324  Q
    |||| | ||||||    
T  30772978 ttgtatcggtttt 30772990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 9596264 - 9596212
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||| ||||||    
T  9596264 tcaacgattatatgtctattttgcgagattttatgcaattttgtgtcggtttt 9596212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 313
Target Start/End: Original strand, 30773057 - 30773092
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||||||||||||||||||||||||||||||||    
T  30773057 attatagatctattttgcgagattttatacaatttt 30773092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 9596145 - 9596099
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  9596145 attatagatctattttgtgagattttatacaattttatgtcggtttt 9596099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 26784911 - 26784957
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccgg 258  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||    
T  26784911 cagtggcggagcccttcatgggcttaggtgggccacggcccacccgg 26784957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 32304632 - 32304586
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  32304632 attataggtctattttgcgagattttatacaattttatgtcggtttt 32304586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 323
Target Start/End: Complemental strand, 26525209 - 26525164
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggttt 323  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||||    
T  26525209 attataggtctattttgcgagattttatacaattttatgtcggttt 26525164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 7440458 - 7440414
Alignment:
Q  280 tatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||    
T  7440458 tataggtctattttgcgagattttatacaattttatgtcggtttt 7440414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 32304751 - 32304699
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||  |||||||| ||||||||||| ||||||||||| ||||||    
T  32304751 tcaacgattataagtctattttacgagattttatgcaattttgtgtcggtttt 32304699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 313
Target Start/End: Complemental strand, 37042643 - 37042611
Alignment:
Q  281 atagatctattttgcgagattttatacaatttt 313  Q
    |||||||||||||||||||||||||||||||||    
T  37042643 atagatctattttgcgagattttatacaatttt 37042611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Original strand, 3631437 - 3631472
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  3631437 attataggtctattttgcgagattttatacaatttt 3631472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 315
Target Start/End: Complemental strand, 13084741 - 13084698
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgt 315  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||    
T  13084741 tcaacgattataggtctaatttgcgagattttatgcaattttgt 13084698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 20117489 - 20117528
Alignment:
Q  285 atctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  20117489 atctattgtgcgagattttatacaattttgtgttgatttt 20117528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 30050188 - 30050145
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgt 317  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||    
T  30050188 aacgattataggtctattttacgatattttatacaattttgtgt 30050145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 6229109 - 6229071
Alignment:
Q  220 gagcccttcctgggctggggtgggccacggcccacccgg 258  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  6229109 gagcccttcatgggctggggtgggccacagcccacccgg 6229071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 312
Target Start/End: Complemental strand, 8074218 - 8074184
Alignment:
Q  278 attatagatctattttgcgagattttatacaattt 312  Q
    |||||| ||||||||||||||||||||||||||||    
T  8074218 attataaatctattttgcgagattttatacaattt 8074184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 10925687 - 10925733
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||||||| |||||||||||||| ||| ||| ||||||    
T  10925687 attatagatctattttgtgagattttatacaaatttatgtcggtttt 10925733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 16823309 - 16823355
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||||  ||||| ||| ||||||    
T  16823309 attatagatctattttgcgagattttatatgattttatgtcggtttt 16823355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 20071310 - 20071260
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||| |||| ||||||| |||||||||||||||||| ||| ||||||    
T  20071310 aacgattaaagatttattttgtgagattttatacaattttatgtcggtttt 20071260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 20487033 - 20487083
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||| |||| | |||||||| ||||||||||||||||||||| ||||||    
T  20487033 aacgatcataggtatattttgcaagattttatacaattttgtgtcggtttt 20487083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 312
Target Start/End: Complemental strand, 25701400 - 25701366
Alignment:
Q  278 attatagatctattttgcgagattttatacaattt 312  Q
    ||||||| |||||||||||||||||||||||||||    
T  25701400 attataggtctattttgcgagattttatacaattt 25701366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 36244281 - 36244239
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtg 316  Q
    |||||| |||||||||||||| ||||||||| |||||||||||    
T  36244281 aacgatcatagatctattttgtgagattttaaacaattttgtg 36244239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 43348812 - 43348858
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||| ||||| ||| ||||||    
T  43348812 attataggtctattttgcgagattttatacgattttatgtcggtttt 43348858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 9596325 - 9596280
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggcccaccc 256  Q
    |||| |||||||||||||   |||||||||||||||||||||||||    
T  9596325 ccagcggcggagcccttcaaaggctggggtgggccacggcccaccc 9596280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 26297167 - 26297122
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccg 257  Q
    ||||||||||||||||| || |||||| |||||||||| |||||||    
T  26297167 cagtggcggagcccttcatgagctgggatgggccacggtccacccg 26297122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 26785010 - 26785054
Alignment:
Q  280 tatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||| ||||||||| |||||||||||||||||| ||| ||||||    
T  26785010 tataggtctattttgtgagattttatacaattttatgtcggtttt 26785054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 6e-25; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 211 - 324
Target Start/End: Original strand, 6755827 - 6755940
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaat 310  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||             ||||||||||||| |||||||||||||||||||| ||||    
T  6755827 ccagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgattataggtctattttgcgagattttatgcaat 6755926  T
Q  311 tttgtgttggtttt 324  Q
    ||||||||| ||||    
T  6755927 tttgtgttgttttt 6755940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 210 - 324
Target Start/End: Complemental strand, 11651127 - 11651013
Alignment:
Q  210 accagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaa 309  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||             ||||||||||||| |||||||||||||||||||| |||    
T  11651127 accagtggcggagcccttcatgggctggggtgggccacggcccgcccggaaaaattaaaaaatcaacgattataggtctattttgcgagattttatgcaa 11651028  T
Q  310 ttttgtgttggtttt 324  Q
    |||||||| ||||||    
T  11651027 ttttgtgtcggtttt 11651013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 40228590 - 40228477
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccgg-nnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaat 310  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||              ||||||||||||| |||||||||||||||||||| ||||    
T  40228590 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaatttaaaaaatcaacgattataggtctattttgcgagattttatgcaat 40228491  T
Q  311 tttgtgttggtttt 324  Q
    ||||||| ||||||    
T  40228490 tttgtgtcggtttt 40228477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 324
Target Start/End: Complemental strand, 2655067 - 2654957
Alignment:
Q  214 gtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatttt 313  Q
    ||||||||||||||| ||||||||||||||||||||||||||||              |||||||||||||||||| ||||||||||||||| |||||||    
T  2655067 gtggcggagcccttcatgggctggggtgggccacggcccacccgaaaaaattaaaaaatcaacgattatagatctagtttgcgagattttatgcaatttt 2654968  T
Q  314 gtgttggtttt 324  Q
    || | ||||||    
T  2654967 gtatcggtttt 2654957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 13233229 - 13233341
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||||             |||||||||||||||||||||||||| ||||||| |||||    
T  13233229 cagtggcggagtccttcataggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgattatagatctattttgcgatattttatgcaatt 13233328  T
Q  312 ttgtgttggtttt 324  Q
    |||| | ||||||    
T  13233329 ttgtatcggtttt 13233341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 44817708 - 44817596
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||             ||||||| ||||| |||||||| ||| ||||||| |||||    
T  44817708 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgactataggtctatttttcgaaattttatgcaatt 44817609  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  44817608 ttgtgtcggtttt 44817596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 13613191 - 13613139
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  13613191 tcaacgattataggtctattttgcgagattttatgcaattttgtgttggtttt 13613139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 27270353 - 27270464
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||             |||| |||||||  ||||||||||||||||||||||||||    
T  27270353 cagtggcggagcccttcatgggctggggtgggccacagcccacccgg-aaaattaaaaaatcaatgattataagtctattttgcgagattttatacaatt 27270451  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  27270452 ttgtgtcggtttt 27270464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 36955109 - 36955057
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  36955109 tcaacgattataggtctattttgcgagattttatgcaattttgtgttggtttt 36955057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 9046178 - 9046135
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgt 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9046178 aacgattatagatctattttgcgagattttatacaattttgtgt 9046135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 36584423 - 36584469
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccgg 258  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  36584423 cagtggcggagcccttcatgggctggggtgggccacggcccacccgg 36584469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 313
Target Start/End: Original strand, 44134493 - 44134594
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||             ||||||||||||| ||||||||| |||||||||| |||||    
T  44134493 cagtggcggagcccttcatgggctggggtgggccacggtccacccggaaaaattaaaaaatcaacgattataggtctattttgtgagattttatgcaatt 44134592  T
Q  312 tt 313  Q
    ||    
T  44134593 tt 44134594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 51001475 - 51001521
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccgg 258  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  51001475 cagtggcggagcccttcatgggctggggtgggccacggcccacccgg 51001521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 18491186 - 18491298
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||             ||||||||||||| ||||||||| ||||||||||  ||||    
T  18491186 cagtggcggagcccttcatgggctggggtgggccacggcccactcggaaaaattaaaaaatcaacgattataggtctattttgtgagattttatgtaatt 18491285  T
Q  312 ttgtgttggtttt 324  Q
    || ||| ||||||    
T  18491286 ttatgtcggtttt 18491298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 19653803 - 19653691
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | |             ||||||||||||| |||||||||  ||||||||| |||||    
T  19653803 cagtggcggagcccttcatgggctggggtgggccacggcccacaccgaaaaataaaaaaatcaacgattataggtctattttgttagattttatgcaatt 19653704  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  19653703 ttgtgtcggtttt 19653691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 43564477 - 43564529
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  43564477 tcaacgattataggtctattttgcgatattttatgcaattttgtgttggtttt 43564529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 50767093 - 50767145
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  50767093 tcaacgattataggtctattttgcgagattttatacaattttatgtcggtttt 50767145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 54795828 - 54795776
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  54795828 tcaacgattataggtctattttgcaagattttatacaattttgtgtcggtttt 54795776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 4632803 - 4632752
Alignment:
Q  273 caacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  4632803 caacgattataagtctattttgcgagattttatacaattttgtgttagtttt 4632752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 31664323 - 31664276
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggcccacccgg 258  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  31664323 ccagtggcggagcccttcatgggatggggtgggccacggcccacccgg 31664276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 315
Target Start/End: Complemental strand, 38141714 - 38141613
Alignment:
Q  215 tggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnn-tcaacgattatagatctattttgcgagattttatacaatttt 313  Q
    |||||||||||||| |||||||||| ||||||||||||||||||              ||||||||||||| |||||||||||||||||||| |||||||    
T  38141714 tggcggagcccttcatgggctggggagggccacggcccacccggaaaaattaaaaaaatcaacgattataggtctattttgcgagattttatgcaatttt 38141615  T
Q  314 gt 315  Q
    ||    
T  38141614 gt 38141613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 31581909 - 31581797
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    |||||||| |||||||| |||||||||||||||||||| |||||| |              |||||||||||| |||||||||| ||||||||| |||||    
T  31581909 cagtggcgaagcccttcatgggctggggtgggccacggtccaccccgaaaaattaaaaaaacaacgattataggtctattttgctagattttatgcaatt 31581810  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  31581809 ttgtgtcggtttt 31581797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 324
Target Start/End: Complemental strand, 44745748 - 44745637
Alignment:
Q  213 agtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaattt 312  Q
    |||||||||||| ||  |||||||||||||||||||||||| || |             ||||||||||||| |||||||||| ||||||||| ||||||    
T  44745748 agtggcggagcctttaatgggctggggtgggccacggcccatccagaaaaattaaaaaatcaacgattataggtctattttgcaagattttatgcaattt 44745649  T
Q  313 tgtgttggtttt 324  Q
    ||||| ||||||    
T  44745648 tgtgtcggtttt 44745637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 10096436 - 10096390
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  10096436 attataggtctattttgcgagattttatacaattttatgtcggtttt 10096390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 13233408 - 13233454
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  13233408 attataggtctattttgcgagattttatacaattttatgtcggtttt 13233454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 22647109 - 22647151
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggccca 253  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  22647109 ccagtggcggagcccttcatgggctgaggtgggccacggccca 22647151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 22647289 - 22647335
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||    
T  22647289 attataggtctattttgcgagattttatacaattttatgtttgtttt 22647335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 36584601 - 36584647
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  36584601 attataggtctattttgcgagattttatacaattttatgtcggtttt 36584647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 41832555 - 41832601
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  41832555 attataggtctattttgcgagattttatacaattttatgtcggtttt 41832601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 44134671 - 44134717
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  44134671 attataggtctattttgcgagattttatacaattttatgtcggtttt 44134717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 16925106 - 16925217
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||||             ||||||||||||| |||| ||||||||| ||||| |||||    
T  16925106 cagtggcggagcccttcatgggc-ggggtgggccacggtccacccggaaaaattaaaaaatcaacgattataggtctaatttgcgagactttatgcaatt 16925204  T
Q  312 ttgtgttggtttt 324  Q
    |||| | ||||||    
T  16925205 ttgtatcggtttt 16925217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 18735241 - 18735278
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  18735241 aacgattataggtctattttgcgagattttatacaatt 18735278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 324
Target Start/End: Original strand, 133414 - 133462
Alignment:
Q  276 cgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||| | ||||||| ||||||||||| |||||||||||||||||    
T  133414 cgattataggtatattttgtgagattttatataattttgtgttggtttt 133462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 10096555 - 10096503
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |  |||||||||||||||||| |||||||||| ||||||    
T  10096555 tcaacgattataggttcattttgcgagattttatataattttgtgtcggtttt 10096503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 324
Target Start/End: Original strand, 13857687 - 13857723
Alignment:
Q  288 tattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||||    
T  13857687 tattttgtgagattttatacaattttgtgttggtttt 13857723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 18491367 - 18491411
Alignment:
Q  280 tatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||    
T  18491367 tataggtctattttgcgagattttatacaattttatgtcggtttt 18491411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 45670019 - 45670071
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| | ||||||||||||||||||  |||||||||| ||||||    
T  45670019 tcaacgattataggtttattttgcgagattttatgtaattttgtgtcggtttt 45670071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 10393895 - 10393934
Alignment:
Q  285 atctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  10393895 atctattttgcgagattttatataattttgtgtcggtttt 10393934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Complemental strand, 12700548 - 12700513
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  12700548 attataggtctattttgcgagattttatacaatttt 12700513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 254
Target Start/End: Original strand, 13857611 - 13857654
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggcccac 254  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||    
T  13857611 ccagtggcgaagcccttcatgggctagggtgggccacggcccac 13857654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Complemental strand, 31581730 - 31581695
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  31581730 attataggtctattttgcgagattttatacaatttt 31581695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Complemental strand, 36954990 - 36954955
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  36954990 attataggtctattttgcgagattttatacaatttt 36954955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 6756007 - 6756053
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||| ||||| ||| ||||||    
T  6756007 attataggtctattttgcgagattttatactattttatgtcggtttt 6756053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 13613072 - 13613026
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||| ||||||||||||||||||| ||| ||||||    
T  13613072 attataggtctattttccgagattttatacaattttatgtcggtttt 13613026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 13869141 - 13869183
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggccca 253  Q
    |||||||||||||||||| |||| | |||||||||||||||||    
T  13869141 ccagtggcggagcccttcatgggttagggtgggccacggccca 13869183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 36584488 - 36584534
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| | |||||||||||||||||| |||||||||||| |||||    
T  36584488 attataggtatattttgcgagattttatgcaattttgtgttagtttt 36584534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 36801946 - 36801908
Alignment:
Q  286 tctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  36801946 tctattttgcgagattttatataattttgtgtcggtttt 36801908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 38141537 - 38141491
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| ||||||||| |||||||||||||||||| ||| ||||||    
T  38141537 attataggtctattttgtgagattttatacaattttatgtcggtttt 38141491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 43564604 - 43564642
Alignment:
Q  286 tctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  43564604 tctattttgcgagattttatacaattttatgtcggtttt 43564642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 44745562 - 44745524
Alignment:
Q  286 tctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  44745562 tctattttgcgagattttatacaattttatgtcggtttt 44745524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 44817530 - 44817484
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||| ||||||||||||||||||||| ||| ||||||    
T  44817530 attataggtctattctgcgagattttatacaattttatgtcggtttt 44817484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 52581455 - 52581500
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccgg 258  Q
    ||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  52581455 cagtggcggagcccttcatgggct-gggtgggccacggcccatccgg 52581500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 7638848 - 7638811
Alignment:
Q  280 tatagatctattttgcgagattttatacaattttgtgt 317  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  7638848 tataaatctattttgcaagattttatacaattttgtgt 7638811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 12700667 - 12700622
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgt 317  Q
    ||||||||||||| | |||||||||||| ||||| |||||||||||    
T  12700667 tcaacgattataggtttattttgcgagactttatgcaattttgtgt 12700622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 18668990 - 18669027
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  18668990 aacgattataggtctactttgcgagattttatacaatt 18669027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 18714841 - 18714878
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  18714841 aacgattataggtctactttgcgagattttatacaatt 18714878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 245
Target Start/End: Complemental strand, 36955169 - 36955136
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggcc 245  Q
    ||||||||||||||||| ||||||||||||||||    
T  36955169 cagtggcggagcccttcatgggctggggtgggcc 36955136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 317
Target Start/End: Complemental strand, 4632681 - 4632645
Alignment:
Q  281 atagatctattttgcgagattttatacaattttgtgt 317  Q
    |||| |||||||||||||||| |||||||||||||||    
T  4632681 ataggtctattttgcgagattatatacaattttgtgt 4632645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 26873702 - 26873814
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||             |||| |||||||| ||||||||||||||||||||||||||    
T  26873702 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaatgattataggtctattttgcgagattttatacaatt 26873801  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  26873802 ttgtgtcggtttt 26873814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 44468177 - 44468068
Alignment:
Q  215 tggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaattttg 314  Q
    |||||||||||||| | |||||||||||||||||||||||| ||             |||||||||||||||||||||||||||||||||| ||||||||    
T  44468177 tggcggagcccttcataggctggggtgggccacggcccacctggaaaaattaaaaaatcaacgattatagatctattttgcgagattttatgcaattttg 44468078  T
Q  315 tgttggtttt 324  Q
    ||||||||||    
T  44468077 tgttggtttt 44468068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 46027679 - 46027791
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||             ||||||||||||| |||||||||||||||||||| |||||    
T  46027679 cagtggcggagcccttcgtgggctggggtgggccacggtccacccggaaaaattaaaaaatcaacgattataggtctattttgcgagattttatgcaatt 46027778  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  46027779 ttgtgtcggtttt 46027791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 23562806 - 23562701
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| || |||||||||||||| |||||||| ||             ||||||||||||||||||||||||||||||||||||||||    
T  23562806 cagtggcggagcccttcatgagctggggtgggccatggcccacctggaaaaattaaaaaatcaacgattatagatctattttgcgagattttatacaatt 23562707  T
Q  312 ttgtgt 317  Q
    ||||||    
T  23562706 ttgtgt 23562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 36358469 - 36358357
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| ||             |||||||||||||||||||||||||| ||||||| |||||    
T  36358469 cagtggcggagcccttcatgggctggggtgggccacggtccacctggaaaaattaaaaaatcaacgattatagatctattttgcgacattttatgcaatt 36358370  T
Q  312 ttgtgttggtttt 324  Q
    |||| | ||||||    
T  36358369 ttgtatcggtttt 36358357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 44724222 - 44724110
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||              |||| ||||||| | ||||||| ||||||||||||||||    
T  44724222 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattaaaaaaccaactattataggtttattttgagagattttatacaatt 44724123  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  44724122 ttgtgtcggtttt 44724110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 9624055 - 9624107
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  9624055 tcaacgattataggtctattttgcgagattttatgcaattttgtgttggtttt 9624107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 324
Target Start/End: Original strand, 45350050 - 45350162
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaat 310  Q
    |||||||||||||||||| ||||||||| |||||||||| ||||||||             ||||||||||||  |||||||||||||||||||| ||||    
T  45350050 ccagtggcggagcccttcatgggctggg-tgggccacggtccacccggaaaaattaaaaaatcaacgattataagtctattttgcgagattttatgcaat 45350148  T
Q  311 tttgtgttggtttt 324  Q
    ||||||| ||||||    
T  45350149 tttgtgtcggtttt 45350162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 216 - 324
Target Start/End: Original strand, 17166869 - 17166977
Alignment:
Q  216 ggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaattttgt 315  Q
    ||||||||||||| ||||||||||||||||||||||||||| |             ||||| ||||||| |||||||||||||||||||| |||||||||    
T  17166869 ggcggagcccttcatgggctggggtgggccacggcccacccagaaaaattaaaaaatcaacaattatagttctattttgcgagattttatgcaattttgt 17166968  T
Q  316 gttggtttt 324  Q
     | ||||||    
T  17166969 atcggtttt 17166977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 36675646 - 36675534
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||              | || |||||||||||||||||| |||||||||| |||||    
T  36675646 cagtggcggagcccttcatgggctggggtgggccacggcccatccgaaaaaattaaaaaattaatgattatagatctattttgtgagattttatgcaatt 36675547  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  36675546 ttgtgtcggtttt 36675534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 44142821 - 44142873
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  44142821 tcaacgattataggtatattttgcgagattttatgcaattttgtgttggtttt 44142873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 44468001 - 44467955
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  44468001 attataggtctattttgcgagattttatacaattttatgttggtttt 44467955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 43859090 - 43859202
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| ||             ||||||||||||| || | ||||||||||||||| |||||    
T  43859090 cagtggcggagcccttcatgggctagggtgggccacggcccacctggaaaaattaaaaaatcaacgattataggtcgaatttgcgagattttatgcaatt 43859189  T
Q  312 ttgtgttggtttt 324  Q
    |||| | ||||||    
T  43859190 ttgtatcggtttt 43859202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 22723875 - 22723823
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||    
T  22723875 tcaacgattataggtctactttgcgagattttatgcaattttgtgtcggtttt 22723823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 31065722 - 31065670
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||| ||||||    
T  31065722 tcaacgattataggtctattttacgagattttatgcaattttgtgtcggtttt 31065670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 31428796 - 31428848
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||| ||||||    
T  31428796 tcaacgattataggtctattttgcaagattttatgcaattttgtgtcggtttt 31428848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 31932010 - 31931958
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||||||||||||||| ||||| ||| ||||||    
T  31932010 tcaacgattataggtctattttgcgagattttatacgattttatgtcggtttt 31931958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 313
Target Start/End: Complemental strand, 36358290 - 36358255
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||||||||||||||||||||||||||||||||    
T  36358290 attatagatctattttgcgagattttatacaatttt 36358255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 17167045 - 17167091
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  17167045 attataggtctattttgcgagattttatacaattttatgtcggtttt 17167091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 22566665 - 22566627
Alignment:
Q  286 tctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  22566665 tctattttgcgagattttatacaattttgtgtcggtttt 22566627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 22723756 - 22723710
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  22723756 attataggtctattttgcgagattttatacaattttatgtcggtttt 22723710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 23469376 - 23469330
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  23469376 attataggtctattttgcgagattttatacaattttatgtcggtttt 23469330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 29075165 - 29075119
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  29075165 attataggtctattttgcgagattttatacaattttatgtcggtttt 29075119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 31065603 - 31065557
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  31065603 attataggtctattttgcgagattttatacaattttatgtcggtttt 31065557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 31428915 - 31428961
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  31428915 attatagatctattttgcgagattttataaaattttatgtcggtttt 31428961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 36675467 - 36675421
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  36675467 attataggtctattttgcgagattttatacaattttatgtcggtttt 36675421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 42241909 - 42241863
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  42241909 attatagatctattttacgagattttatacaattttatgtcggtttt 42241863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 44142939 - 44142985
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  44142939 attataggtctattttgcgagattttatacaattttatgtcggtttt 44142985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 44724043 - 44723997
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  44724043 attataggtctattttgcgagattttatacaattttatgtcggtttt 44723997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 29662932 - 29662977
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccg 257  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||||    
T  29662932 cagtggcggagcccttcatgggctagggtgggctacggcccacccg 29662977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 29075284 - 29075232
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| ||||| |||||||||||| ||||||| ||||||||||| ||||||    
T  29075284 tcaacgactataggtctattttgcgatattttatgcaattttgtgtcggtttt 29075232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 8461760 - 8461799
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaatttt 313  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  8461760 aacgattataggtctattttgcgatattttatacaatttt 8461799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 258
Target Start/End: Complemental strand, 16834433 - 16834390
Alignment:
Q  215 tggcggagcccttcctgggctggggtgggccacggcccacccgg 258  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||    
T  16834433 tggcggagcccttcatgggctggggtgggccatggcccatccgg 16834390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 18104417 - 18104367
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggttt 323  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||| |||||    
T  18104417 tcaacgattataggtctattttgcgaga-tttatgcaattttgtgtcggttt 18104367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 255
Target Start/End: Original strand, 19692467 - 19692510
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacc 255  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||    
T  19692467 cagtggcggagcccttcatgggctggggtggaccacggtccacc 19692510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 325
Target Start/End: Original strand, 30781072 - 30781123
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgttggttttg 325  Q
    |||||| ||||||||| ||||| | ||||||||||||||||||| |||||||    
T  30781072 aacgatcatagatctactttgcaaaattttatacaattttgtgtaggttttg 30781123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Original strand, 40055769 - 40055804
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  40055769 attataggtctattttgcgagattttatacaatttt 40055804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Original strand, 45350229 - 45350264
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  45350229 attataggtctattttgcgagattttatacaatttt 45350264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Original strand, 46027858 - 46027893
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  46027858 attataggtctattttgcgagattttatacaatttt 46027893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 9624174 - 9624220
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||| ||||||||||||||||||| ||| ||||||    
T  9624174 attataggtctattttccgagattttatacaattttatgtcggtttt 9624220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 23469481 - 23469443
Alignment:
Q  286 tctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  23469481 tctattttgcgagattttatgcaattttgtgtcggtttt 23469443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 29502229 - 29502179
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||| |||| | |||||||| ||||||||| ||||||||||||||||||    
T  29502229 aacgataataggtatattttgcaagattttattcaattttgtgttggtttt 29502179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 39976499 - 39976545
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||||||| |||||||||||||| ||| ||| ||||||    
T  39976499 attatagatctattttgtgagattttatacaaatttatgtcggtttt 39976545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 40883343 - 40883393
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||| ||||| |||||| |||||||||||||||| |||||||| ||||||    
T  40883343 aacgactataggtctattatgcgagattttatacacttttgtgtcggtttt 40883393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 8727725 - 8727766
Alignment:
Q  216 ggcggagcccttcctgggctggggtgggccacggcccacccg 257  Q
    ||||||||||||| |||||| |||||||||||| ||||||||    
T  8727725 ggcggagcccttcatgggctagggtgggccacgacccacccg 8727766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 29502287 - 29502246
Alignment:
Q  216 ggcggagcccttcctgggctggggtgggccacggcccacccg 257  Q
    ||||||||||||| |||||| ||||||||||| |||||||||    
T  29502287 ggcggagcccttcatgggctagggtgggccacagcccacccg 29502246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 324
Target Start/End: Original strand, 6961122 - 6961158
Alignment:
Q  288 tattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  6961122 tattttgcaagattttatacaattttgtgtcggtttt 6961158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 9014391 - 9014427
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacg 248  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  9014391 cagtggcggagcccttcatgggctgtggtgggccacg 9014427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 39976380 - 39976432
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||  |||| ||||||||||||||| ||||||||| | ||||||    
T  39976380 tcaacgattatatgtctaatttgcgagattttatgcaattttgtatcggtttt 39976432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 42242028 - 42241976
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| | || |||| |||||||||| ||||||||||| ||||||    
T  42242028 tcaacgattataggtttaatttgtgagattttatgcaattttgtgtcggtttt 42241976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 29126203 - 29126091
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||             ||||||||||||| |||||||||||||||||||| |||||    
T  29126203 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgattataggtctattttgcgagattttatgcaatt 29126104  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  29126103 ttgtgtcggtttt 29126091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 52201981 - 52202093
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||             ||||||||||||| ||||||||||||||||||||||||||    
T  52201981 cagtggcggagcccttcatgggctggggtgggtcacggcccacccggaaaaattaaaaaatcaacgattataggtctattttgcgagattttatacaatt 52202080  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  52202081 ttgtgtcggtttt 52202093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 18163717 - 18163829
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||             ||||||||||||| |||||||||||||||||||| |||||    
T  18163717 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaataaaaaaatcaacgattataggtctattttgcgagattttattcaatt 18163816  T
Q  312 ttgtgttggtttt 324  Q
    |||| | ||||||    
T  18163817 ttgtatcggtttt 18163829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 13595033 - 13594921
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    |||||||||||||| || |||||||||||||||||||||||||| |              |||||||||||||||||||||||||||||||||| |||||    
T  13595033 cagtggcggagcccgtcatgggctggggtgggccacggcccacctgaaaaaattaaaaaatcaacgattatagatctattttgcgagattttatgcaatt 13594934  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  13594933 ttgtgtcggtttt 13594921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 7160450 - 7160345
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||             ||||||||||||| ||||||||||||||||||||  ||||    
T  7160450 cagtggcggagcctttcatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgattataggtctattttgcgagattttatgtaatt 7160351  T
Q  312 ttgtgt 317  Q
    ||||||    
T  7160350 ttgtgt 7160345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 50527793 - 50527681
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||              |||||| |||||| |||||||||||||||||||| |||||    
T  50527793 cagtggcggagcccttcatgggctggggtgggccacggcccacccgaaaaaattaaaaaatcaacgtttatagttctattttgcgagattttatgcaatt 50527694  T
Q  312 ttgtgttggtttt 324  Q
    |||| | ||||||    
T  50527693 ttgtatcggtttt 50527681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 52571584 - 52571472
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||             ||||||||||||| |||| ||||||| ||||||| |||||    
T  52571584 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgattataggtctaatttgcgatattttatgcaatt 52571485  T
Q  312 ttgtgttggtttt 324  Q
    |||| | ||||||    
T  52571484 ttgtatcggtttt 52571472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 4618210 - 4618262
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  4618210 tcaacgattatagatctattttgcaagattttatacaattttgtgtcggtttt 4618262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 315
Target Start/End: Original strand, 36633486 - 36633589
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||||||||||||||||| |||| ||||             ||||||||||||| ||||||||| ||||||||||||||||    
T  36633486 cagtggcggagcccttcatgggctggggtgggccacgacccatccggaaaaattaaaaaatcaacgattataggtctattttgtgagattttatacaatt 36633585  T
Q  312 ttgt 315  Q
    ||||    
T  36633586 ttgt 36633589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 12251667 - 12251562
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||             ||||||||||||| ||||||||| ||||||||||| ||||    
T  12251667 cagtggcagagcccttcatgggctggggtggaccacggcccacccggaaaaatttaaaaatcaacgattataggtctattttgtgagattttatataatt 12251568  T
Q  312 ttgtgt 317  Q
    ||||||    
T  12251567 ttgtgt 12251562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 16908968 - 16908875
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttat 305  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||             ||||||||||||| ||||||||||||||||||||    
T  16908968 cagtggcagagcccttcatgggctggggtgggccacggcccacccggaaaaataaaaaattcaacgattataggtctattttgcgagattttat 16908875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 324
Target Start/End: Original strand, 22729222 - 22729331
Alignment:
Q  215 tggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaattttg 314  Q
    |||||||||||||  |||||||||||||||||||||||||||||             ||||||| ||||| |||||||| ||||||||||| ||||||||    
T  22729222 tggcggagcccttaatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgactataggtctatttttcgagattttatgcaattttg 22729321  T
Q  315 tgttggtttt 324  Q
    ||| ||||||    
T  22729322 tgtcggtttt 22729331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 28952551 - 28952439
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||  ||||| ||             ||||||||||| | |||||||||||||||||||| |||||    
T  28952551 cagtggcggagcccttcatgggctggggtgggccacgatccacctggaaaaattaaaaaatcaacgattatgggtctattttgcgagattttatgcaatt 28952452  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  28952451 ttgtgtcggtttt 28952439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 49169792 - 49169904
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||  ||||||||||||||||||  ||||||| |             ||||||||||||| |||||||||||| |||||||||||||    
T  49169792 cagtggcggagccctttatgggctggggtgggccacaacccacccagaaaagtaaaaaaatcaacgattataggtctattttgcgaaattttatacaatt 49169891  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  49169892 ttgtgtcggtttt 49169904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 1093031 - 1092925
Alignment:
Q  218 cggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaattttgtgt 317  Q
    ||||||||||| ||||||| |||||||||||||||||||||             ||||||| ||||  |||||||||||||||||||| |||||||||||    
T  1093031 cggagcccttcatgggctgaggtgggccacggcccacccggaaaaattaaaaaatcaacgactataagtctattttgcgagattttatgcaattttgtgt 1092932  T
Q  318 tggtttt 324  Q
     ||||||    
T  1092931 gggtttt 1092925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 35083971 - 35084017
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  35083971 attataggtctattttgcgagattttatacaattttatgttggtttt 35084017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 45045388 - 45045434
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  45045388 attataggtctattttgcgagattttatacaattttatgttggtttt 45045434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 49657192 - 49657146
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  49657192 attatagatctattttgcgagattttatacaattttatgtcggtttt 49657146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 52499287 - 52499245
Alignment:
Q  282 tagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  52499287 tagatttattttgcgagattttatacaattttgtgttggtttt 52499245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 44205471 - 44205512
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaatttt 313  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  44205471 tcaacgattatagatctattttgcgagattttatgcaatttt 44205512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 44254700 - 44254648
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||| ||||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  44254700 tcaatgattatatatctattttgcgagattttatgcaattttgtgtcggtttt 44254648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 313
Target Start/End: Complemental strand, 1092858 - 1092823
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||||||||||||||||||||||||||||||||    
T  1092858 attatagatctattttgcgagattttatacaatttt 1092823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 324
Target Start/End: Complemental strand, 11232249 - 11232202
Alignment:
Q  277 gattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  11232249 gattataggtctattttgcgagattttatgcaattttgtgtcggtttt 11232202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 11232135 - 11232089
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  11232135 attataggtctattttgcgagattttatacaattttatgtcggtttt 11232089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 13594854 - 13594808
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  13594854 attataggtctattttgcgagattttatacaattttatgtcggtttt 13594808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 22729398 - 22729444
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  22729398 attataggtctattttgcgagattttatacaattttatgtcggtttt 22729444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 32270900 - 32270854
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  32270900 attataggtctattttgcgagattttatacaattttatgtcggtttt 32270854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 44254581 - 44254535
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  44254581 attataggtctattttgcgagattttatacaattttatgtcggtttt 44254535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 50527614 - 50527568
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  50527614 attataggtctattttgcgagattttatacaattttatgtcggtttt 50527568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 52202160 - 52202206
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  52202160 attatagatctattttacgagattttatacaattttatgtcggtttt 52202206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 21259534 - 21259489
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgt 317  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||||    
T  21259534 tcaacgattataggtctattttgtgagattttatgcaattttgtgt 21259489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 25246324 - 25246283
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaatttt 313  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  25246324 tcaacgtttataggtctattttgcgagattttatacaatttt 25246283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 27742545 - 27742597
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||| |||||| ||||||||| |||||||||| ||||||||||| ||||||    
T  27742545 tcaacgcttataggtctattttgagagattttatgcaattttgtgtcggtttt 27742597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 45045268 - 45045320
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||| |||||||||| ||||||||||||||||| | |||||| ||||||||||    
T  45045268 tcaatgattatagatttattttgcgagattttaaataattttttgttggtttt 45045320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 252
Target Start/End: Complemental strand, 7441737 - 7441702
Alignment:
Q  217 gcggagcccttcctgggctggggtgggccacggccc 252  Q
    |||||||||||| |||||||||||||||||||||||    
T  7441737 gcggagcccttcatgggctggggtgggccacggccc 7441702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 258
Target Start/End: Complemental strand, 32271074 - 32271031
Alignment:
Q  215 tggcggagcccttcctgggctggggtgggccacggcccacccgg 258  Q
    |||||||||| ||| |||||||||||||||||| ||||||||||    
T  32271074 tggcggagcctttcatgggctggggtgggccacagcccacccgg 32271031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 2618883 - 2618925
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggccca 253  Q
    |||||||||||||||||| |||| || ||||||||||||||||    
T  2618883 ccagtggcggagcccttcatgggttgaggtgggccacggccca 2618925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 16908799 - 16908753
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||| ||||||||||||||||| ||| ||||||    
T  16908799 attataggtctattttgctagattttatacaattttatgtcggtttt 16908753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 28952364 - 28952326
Alignment:
Q  286 tctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  28952364 tctattttgcgagattttatacaattttatgtcggtttt 28952326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 29126024 - 29125978
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||| ||||| ||| ||||||    
T  29126024 attataggtctattttgcgagattttatacgattttatgtcggtttt 29125978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 32271005 - 32270967
Alignment:
Q  286 tctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  32271005 tctattttgcgagattttatgcaattttgtgtcggtttt 32270967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 34660807 - 34660857
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||| |||| |||||||| |||||||||||| |||||||||| ||||||    
T  34660807 aacgatcataggtctattttacgagattttatataattttgtgtcggtttt 34660857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 36633665 - 36633711
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| ||||||||||||||| |||||||||||| ||| ||||||    
T  36633665 attataggtctattttgcgagatattatacaattttatgtcggtttt 36633711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 324
Target Start/End: Original strand, 2618953 - 2618994
Alignment:
Q  281 atagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||| ||||||||||||||||||||||||  |||||||||||||    
T  2618953 ataggtctattttgcgagattttatacaa--ttgtgttggtttt 2618994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 31174655 - 31174607
Alignment:
Q  276 cgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||| |||||||||  |||||| ||||||||||||||||||| ||||||    
T  31174655 cgatcatagatctaccttgcgatattttatacaattttgtgtcggtttt 31174607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 919868 - 919756
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||| ||||||||||| |||||||||||||||||||||||| ||||             |||||||||||||||||||||||||||||||||| |||||    
T  919868 cagtgacggagcccttcatgggctggggtgggccacggcccatccggaaaaatttaaaaatcaacgattatagatctattttgcgagattttatgcaatt 919769  T
Q  312 ttgtgttggtttt 324  Q
    |||||||||||||    
T  919768 ttgtgttggtttt 919756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 6849752 - 6849864
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||             ||||||||||||| |||| |||||||||||||||||||||    
T  6849752 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgattataggtctaatttgcgagattttatacaatt 6849851  T
Q  312 ttgtgttggtttt 324  Q
    |||| | ||||||    
T  6849852 ttgtatcggtttt 6849864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 16693107 - 16692995
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||             ||||||||||||| |||||||| ||||||||||| |||||    
T  16693107 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgattataggtctattttacgagattttatgcaatt 16693008  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  16693007 ttgtgtcggtttt 16692995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 44052620 - 44052505
Alignment:
Q  209 aaccagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttataca 308  Q
    |||| ||||||||||||||| ||||||||||||||||||||| |||||||             ||||||||||||| ||||||||||||||||||||  |    
T  44052620 aaccggtggcggagcccttcatgggctggggtgggccacggctcacccggaaaaatttaaaaatcaacgattataggtctattttgcgagattttatgta 44052521  T
Q  309 attttgtgttggtttt 324  Q
    ||||||||||||||||    
T  44052520 attttgtgttggtttt 44052505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 210 - 324
Target Start/End: Complemental strand, 33012217 - 33012103
Alignment:
Q  210 accagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaa 309  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||             ||||||||||||| ||||||||| |||||||||| |||    
T  33012217 accaatggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgattataggtctattttgtgagattttatgcaa 33012118  T
Q  310 ttttgtgttggtttt 324  Q
    |||||||| ||||||    
T  33012117 ttttgtgtcggtttt 33012103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 8530082 - 8530187
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||              ||||||||||||| |||||||||||||||||||| |||||    
T  8530082 cagtggcggagcccttcatgggctggggtgggccacggcccacccgaaaaaattaaaaaatcaacgattataggtctattttgcgagattttatgcaatt 8530181  T
Q  312 ttgtgt 317  Q
    ||||||    
T  8530182 ttgtgt 8530187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 17285452 - 17285351
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||             ||||||||||||| |||| ||||||||||||||| |||||    
T  17285452 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgattataggtctaatttgcgagattttatgcaatt 17285353  T
Q  312 tt 313  Q
    ||    
T  17285352 tt 17285351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 315
Target Start/End: Original strand, 29169941 - 29170044
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||             ||||||||||||| |||| ||||||||||||||| |||||    
T  29169941 cagtggcggagcccttcatgggctggggtgggccacagcccacccggaaaaattaaaaaatcaacgattataggtctaatttgcgagattttatgcaatt 29170040  T
Q  312 ttgt 315  Q
    ||||    
T  29170041 ttgt 29170044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 51139745 - 51139797
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  51139745 tcaacgattataggtctattttgcgagattttatacaattttgtgtcggtttt 51139797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 37125692 - 37125794
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||             ||||||||||||| |||||||||||| ||||||| |||||    
T  37125692 cagtggcggagcccttcatgggctgaggtgggccacggcccacccggaaaaattataaaatcaacgattataggtctattttgcgatattttatgcaatt 37125791  T
Q  312 ttg 314  Q
    |||    
T  37125792 ttg 37125794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 29981865 - 29981753
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||             ||||||||||||| |||| |||| || ||||||| |||||    
T  29981865 cagtggcggagcccttcatgggctggggtgggccacggcccatccggaaaaattaaaaaatcaacgattataggtctactttgtgatattttatgcaatt 29981766  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  29981765 ttgtgtcggtttt 29981753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 47561726 - 47561838
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| | || | ||||||||||||||||||||||             ||||||||||||| |||||||||||| ||||||| |||||    
T  47561726 cagtggcggagcccttcataggtttgggtgggccacggcccacccggaaaaataaaaaaatcaacgattataggtctattttgcgatattttatgcaatt 47561825  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  47561826 ttgtgtaggtttt 47561838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 324
Target Start/End: Complemental strand, 9246994 - 9246947
Alignment:
Q  277 gattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  9246994 gattatagatctattttgcgagattttatacaattttgtatcggtttt 9246947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 42372148 - 42372194
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  42372148 attataggtctattttgcgagattttatacaattttatgttggtttt 42372194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 46224739 - 46224693
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  46224739 attatagatctattttgcgagattttatacaattttatgtcggtttt 46224693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 42371969 - 42372081
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||  |||||||||||||||||||||| |             |||| |||||||| ||||||||| |||||||||| |||||    
T  42371969 cagtggcggagcccttcatggattggggtgggccacggcccacccagaaaaattaaaaaatcaatgattataggtctattttgtgagattttatgcaatt 42372068  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  42372069 ttgtgtcggtttt 42372081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 24544816 - 24544764
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||| ||||||    
T  24544816 tcaacgattataagtctattttgcgagattttatgcaattttgtgtcggtttt 24544764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 40428879 - 40428827
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||    
T  40428879 tcaacgactataggtctattttgcgagattttatgcaattttgtgtcggtttt 40428827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 44317626 - 44317678
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||| ||||    
T  44317626 tcaacgattataggtctattttgcgagattttatgtaattttgtgttgatttt 44317678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 45836903 - 45836955
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| | ||||||    
T  45836903 tcaacgattataggtctatattgcgagattttatacaattttgtatcggtttt 45836955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 919689 - 919643
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  919689 attataggtctattttgcgagattttatacaattttatgtcggtttt 919643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 8086408 - 8086454
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  8086408 attataggtctattttgcgagattttatacaattttatgtcggtttt 8086454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 9042576 - 9042530
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccgg 258  Q
    ||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  9042576 cagtggcggagcccttcatgggctgggctgggccacggcccatccgg 9042530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 315
Target Start/End: Original strand, 23177351 - 23177444
Alignment:
Q  222 gcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaattttgt 315  Q
    ||||||| |||||||||||||||||||| ||||||||             ||||||||||||  |||||||||||||||||||| |||||||||    
T  23177351 gcccttcgtgggctggggtgggccacggtccacccggaaaaatttaaaaatcaacgattataagtctattttgcgagattttatgcaattttgt 23177444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 24790613 - 24790659
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  24790613 attataggtctattttgcgagattttatacaattttatgtcggtttt 24790659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 25299067 - 25299021
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  25299067 attataggtctattttgcgagattttatacaattttatgtcggtttt 25299021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 29981686 - 29981640
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  29981686 attataggtctattttgcgagattttatacaattttatgtcggtttt 29981640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 32540690 - 32540640
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||| ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  32540690 aacgactataggtctattttacgagattttatacaattttgtgtcggtttt 32540640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 40428760 - 40428714
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  40428760 attatagttctattttgcgagattttatacaattttatgtcggtttt 40428714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 40567144 - 40567190
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  40567144 attataggtctattttgcgagattttatacaattttatgtcggtttt 40567190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 45837022 - 45837068
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  45837022 attataggtctattttgcgagattttatacaattttatgtcggtttt 45837068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 48708396 - 48708350
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  48708396 attataggtctattttgcgagattttatacaattttatgtcggtttt 48708350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 46224856 - 46224815
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgt 315  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  46224856 aacgattataaatctattttgcgagattttatgcaattttgt 46224815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 48708515 - 48708474
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaatttt 313  Q
    ||||||||||||| |||||||||||||||||||| |||||||    
T  48708515 tcaacgattataggtctattttgcgagattttatgcaatttt 48708474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 48708576 - 48708535
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggccca 253  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  48708576 cagtggcggagcccttcatgggctggggtgagccacggccca 48708535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 8086289 - 8086341
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||| ||||||||| ||||||| ||| ||||||    
T  8086289 tcaacgactatagatctattttgctagattttatgcaattttatgtaggtttt 8086341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 37343027 - 37343067
Alignment:
Q  214 gtggcggagcccttcctgggctggggtgggccacggcccac 254  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  37343027 gtggcggagcccttcatgggctggggtcggccacggcccac 37343067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 46224918 - 46224874
Alignment:
Q  213 agtggcggagcccttcctgggctggggtgggccacggcccacccg 257  Q
    |||||||||||||||| |||| ||||||||||||||| |||||||    
T  46224918 agtggcggagcccttcatgggttggggtgggccacggtccacccg 46224874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 324
Target Start/End: Complemental strand, 25299181 - 25299134
Alignment:
Q  277 gattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||| |||||||||||||||||||| ||| ||||||| ||||||    
T  25299181 gattataggtctattttgcgagattttatgcaactttgtgtcggtttt 25299134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Original strand, 37125871 - 37125906
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37125871 attataggtctattttgcgagattttatacaatttt 37125906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 324
Target Start/End: Original strand, 40567042 - 40567077
Alignment:
Q  289 attttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||||||| ||||||||||||||||||    
T  40567042 attttgcgagattttatgcaattttgtgttggtttt 40567077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Original strand, 44317745 - 44317780
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  44317745 attataggtctattttgcgagattttatacaatttt 44317780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 16692928 - 16692882
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| ||||||||| |||||||||||||||||| ||| ||||||    
T  16692928 attataggtctattttgtgagattttatacaattttatgtcggtttt 16692882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 17880011 - 17879973
Alignment:
Q  220 gagcccttcctgggctggggtgggccacggcccacccgg 258  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  17880011 gagcccttcatgggctggggtgggtcacggcccacccgg 17879973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 23177528 - 23177566
Alignment:
Q  286 tctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  23177528 tctattttgcgagattttatacaattttatgtcggtttt 23177566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 324
Target Start/End: Original strand, 24790433 - 24790546
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaat 310  Q
    ||||||| |||||||||| |||||||| |||||||||| ||||||| |             ||||||| ||||  ||| |||||||||||||||| ||||    
T  24790433 ccagtggtggagcccttcatgggctggagtgggccacgacccacccagaaaaataaaaaaatcaacgactataagtctgttttgcgagattttatgcaat 24790532  T
Q  311 tttgtgttggtttt 324  Q
    ||||||| ||||||    
T  24790533 tttgtgtcggtttt 24790546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 33012036 - 33011990
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||| ||||||| ||| ||||||    
T  33012036 attataggtctattttgcgagattttatgcaattttatgtcggtttt 33011990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 47561905 - 47561951
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||| ||||||||||||||| ||| ||||||    
T  47561905 attataggtctattttgcgaaattttatacaattttatgtcggtttt 47561951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 43532519 - 43532470
Alignment:
Q  209 aaccagtggcggagcccttcctgggctggggtgggccacggcccacccgg 258  Q
    |||| ||||||||||||| | |||| ||||||||||||||||||| ||||    
T  43532519 aaccggtggcggagccctccatgggttggggtgggccacggcccatccgg 43532470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 45836854 - 45836887
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggcc 245  Q
    ||||||||||||||||| ||||||||||||||||    
T  45836854 cagtggcggagcccttcatgggctggggtgggcc 45836887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 210 - 324
Target Start/End: Complemental strand, 41838116 - 41838002
Alignment:
Q  210 accagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaa 309  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||             ||||||||||||| |||||||||||||||||||| |||    
T  41838116 accagtggcggagcccttcatgggctggggtgggccacggcccgcccggaaaaattaaaaaatcaacgattataggtctattttgcgagattttatgcaa 41838017  T
Q  310 ttttgtgttggtttt 324  Q
    |||||||| ||||||    
T  41838016 ttttgtgtcggtttt 41838002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 2317121 - 2317173
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2317121 tcaacgattataggtctattttgcgagattttatacaattttgtgttggtttt 2317173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 24797216 - 24797101
Alignment:
Q  209 aaccagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttataca 308  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||             ||||||||||||| |||||||||| ||||||||| ||    
T  24797216 aaccagtggcggagcccttcatgggctggggtgggccacggcccatccggaaaaatttaaaaatcaacgattataggtctattttgcaagattttatgca 24797117  T
Q  309 attttgtgttggtttt 324  Q
    ||||||| | ||||||    
T  24797116 attttgtatcggtttt 24797101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 317
Target Start/End: Complemental strand, 3659984 - 3659877
Alignment:
Q  210 accagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaa 309  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||||             ||||||||||||  |||||||||||||||||||| |||    
T  3659984 accagtggcggagcccttcatgggctgggatgggccacagcccacccggaaaaattataaaatcaacgattataagtctattttgcgagattttatgcaa 3659885  T
Q  310 ttttgtgt 317  Q
    ||||||||    
T  3659884 ttttgtgt 3659877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 7413091 - 7413143
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  7413091 tcaacgattataggtctattttgcgagattttatacaattttgtgtcggtttt 7413143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 324
Target Start/End: Original strand, 10092315 - 10092366
Alignment:
Q  273 caacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  10092315 caacgattataggtctattttgcgagattttatgcaattttgtgttggtttt 10092366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 34934417 - 34934370
Alignment:
Q  210 accagtggcggagcccttcctgggctggggtgggccacggcccacccg 257  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34934417 accagtggcggagcccttcatgggctggggtgggccacggcccacccg 34934370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 3886940 - 3886835
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||||||||| ||||||||  |||||||             ||||||||||||| |||||||||||||||||||| |||||    
T  3886940 cagtggcggagcccttcatgggctggggtaggccacggttcacccggaaaaattaaaaaatcaacgattataggtctattttgcgagattttatgcaatt 3886841  T
Q  312 ttgtgt 317  Q
    ||||||    
T  3886840 ttgtgt 3886835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 5590330 - 5590221
Alignment:
Q  215 tggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaattttg 314  Q
    |||||||||||||  |||||||||||||||||||||||||||||             ||||||| ||||| |||||||| ||||||||||| ||||||||    
T  5590330 tggcggagcccttaatgggctggggtgggccacggcccacccggaaaaattaaaaaatcaacgactataggtctatttttcgagattttatgcaattttg 5590231  T
Q  315 tgttggtttt 324  Q
    ||| ||||||    
T  5590230 tgtcggtttt 5590221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 9830607 - 9830712
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||              ||||||||||||| | |||||||||||||||||| ||| |    
T  9830607 cagtggcggagcccttcatgggctggggtgggccacggcccacccgaaaaaattaaaaaatcaacgattataggtttattttgcgagattttatgcaact 9830706  T
Q  312 ttgtgt 317  Q
    ||||||    
T  9830707 ttgtgt 9830712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 38567124 - 38567241
Alignment:
Q  209 aaccagtggcggagcccttcctgggct-ggggtgggccacggcccaccc-ggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttata 306  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| ||             ||||||||||||| | ||||||||||||||||||     
T  38567124 aaccagtggcggagcccttcatgggctgggggtgggccacggcccacccaggaaaaattaaaaaatcaacgattataggtatattttgcgagattttatg 38567223  T
Q  307 caattttgtgttggtttt 324  Q
    ||||||||||||| ||||    
T  38567224 caattttgtgttgatttt 38567241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 7242734 - 7242682
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  7242734 tcaacgattataggtttattttgcgagattttatgcaattttgtgttggtttt 7242682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 7422148 - 7422096
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  7422148 tcaacgattataggtttattttgcgagattttatacaattttgtgtcggtttt 7422096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 42556193 - 42556141
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  42556193 tcaacgattataggtctattttgcgagattttatgcaattttgtgtcggtttt 42556141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 43117408 - 43117460
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  43117408 tcaacaattataggtctattttgcgagattttatacaattttgtgtcggtttt 43117460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 1183884 - 1183934
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  1183884 aacgattatagatctattttgcgagattttatgcaattttgtatcggtttt 1183934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 4697985 - 4698031
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  4697985 attatagatctattttgcgagattttatacaattttatgtcggtttt 4698031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 197265 - 197314
Alignment:
Q  275 acgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  197265 acgattataggtctattttgcgagattttatacaattttatgtcggtttt 197314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 312102 - 312151
Alignment:
Q  275 acgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  312102 acgattataggtctattttgcgagattttatacaattttatgtcggtttt 312151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 4231220 - 4231331
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    |||||||||| |||||| |||||| |||||||||||||||||||||              ||||||||||||| |||||||| ||||||||||| |||||    
T  4231220 cagtggcggaccccttcatgggctagggtgggccacggcccacccg-aaaaattaaaaaatcaacgattataggtctattttacgagattttatgcaatt 4231318  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  4231319 ttgtgtcggtttt 4231331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 317
Target Start/End: Original strand, 6316877 - 6316981
Alignment:
Q  213 agtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaattt 312  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||              ||||| ||||||| ||||||||| |||||||||| ||||||    
T  6316877 agtggcggagcctttcatgggctggggtgggccacggcccacccgaaaaaattaaaaaatcaacaattataggtctattttgtgagattttatgcaattt 6316976  T
Q  313 tgtgt 317  Q
    |||||    
T  6316977 tgtgt 6316981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 28564944 - 28564989
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgt 317  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||    
T  28564944 tcaacgattataggtctattttgcgagattttatgcaattttgtgt 28564989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 28572567 - 28572612
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgt 317  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||    
T  28572567 tcaacgattataggtctattttgcgagattttatgcaattttgtgt 28572612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 1183823 - 1183863
Alignment:
Q  213 agtggcggagcccttcctgggctggggtgggccacggccca 253  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  1183823 agtggcggagcccttcatgggctggggtgggccacggccca 1183863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 21434899 - 21434951
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| | ||||||||||| |||||| ||||||||||||||||||    
T  21434899 tcaacgattataggtttattttgcgaggttttatgcaattttgtgttggtttt 21434951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 22658446 - 22658394
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||| ||||||    
T  22658446 tcaacgcttataggtctattttgcgagattttatgcaattttgtgtcggtttt 22658394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 324
Target Start/End: Original strand, 38567306 - 38567354
Alignment:
Q  276 cgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  38567306 cgattataggtctattttgcgagattttatacaattttatgtcggtttt 38567354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 313
Target Start/End: Original strand, 10092433 - 10092468
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||||||||||||||||||||||||||||||||    
T  10092433 attatagatctattttgcgagattttatacaatttt 10092468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 3886761 - 3886715
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  3886761 attataggtctattttgcgagattttatacaattttatgtcggtttt 3886715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 5590154 - 5590108
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  5590154 attataggtctattttgcgagattttatacaattttatgtcggtttt 5590108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 250
Target Start/End: Original strand, 7012337 - 7012375
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggc 250  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  7012337 cagtggcggagcccttcatgggctggggtgggccacggc 7012375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 7012516 - 7012562
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  7012516 attataggtctattttgcgagattttatacaattttatgtcggtttt 7012562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 22658327 - 22658281
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  22658327 attataggtctattttgcgagattttatacaattttatgtcggtttt 22658281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 36060536 - 36060582
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  36060536 attataggtctattttgcgagattttatacaattttatgtcggtttt 36060582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 42556074 - 42556028
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  42556074 attataggtctattttgcgagattttatacaattttatgtcggtttt 42556028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 43117528 - 43117574
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  43117528 attataggtctattttgcgagattttatacaattttatgtcggtttt 43117574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 11635758 - 11635803
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccg 257  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||    
T  11635758 cagtggcggagcccttcatgggctagggtgggccacgacccacccg 11635803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 36060417 - 36060462
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgt 317  Q
    ||||||||||||| | |||||||||||||||||| |||||||||||    
T  36060417 tcaacgattataggtatattttgcgagattttatgcaattttgtgt 36060462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 315
Target Start/End: Original strand, 1098057 - 1098160
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||  || |||||||||||||||||||||             ||||||||||||| |||| ||||||| ||||||| |||||    
T  1098057 cagtggcggagcccttcatggcgtgaggtgggccacggcccacccggaaaaattaaaaaatcaacgattataggtctaatttgcgatattttatgcaatt 1098156  T
Q  312 ttgt 315  Q
    ||||    
T  1098157 ttgt 1098160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 41388065 - 41388117
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||| ||||||| | |||||||| ||||||||||||||||||||| ||||||    
T  41388065 tcaactattataggtttattttgcaagattttatacaattttgtgtcggtttt 41388117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 324
Target Start/End: Complemental strand, 25642823 - 25642780
Alignment:
Q  281 atagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||| ||||||||||||||||||||| |||||||||| ||||||    
T  25642823 ataggtctattttgcgagattttatataattttgtgtcggtttt 25642780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 32018073 - 32018030
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgt 317  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||    
T  32018073 aacgattataggtctattttaagagattttatacaattttgtgt 32018030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 1184001 - 1184047
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||| ||||||||||||||||||||||| ||| ||||||    
T  1184001 attataggtctaatttgcgagattttatacaattttatgtcggtttt 1184047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 2317240 - 2317286
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||| ||||||||||||||| ||| ||||||    
T  2317240 attataggtctattttgcgatattttatacaattttatgtcggtttt 2317286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 7242608 - 7242570
Alignment:
Q  286 tctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  7242608 tctattttgcgagattttatacaattttatgtcggtttt 7242570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 21435018 - 21435064
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||| ||||||||||||||||| ||| ||||||    
T  21435018 attataggtctattttgctagattttatacaattttatgtcggtttt 21435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 28565063 - 28565109
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| ||||||||| |||||||||||||||||| ||| ||||||    
T  28565063 attataggtctattttgtgagattttatacaattttatgtcggtttt 28565109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 28572686 - 28572732
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| ||||||||| |||||||||||||||||| ||| ||||||    
T  28572686 attataggtctattttgtgagattttatacaattttatgtcggtttt 28572732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 41388184 - 41388230
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| ||||||||| |||||||||||||||||| ||| ||||||    
T  41388184 attataggtctattttgtgagattttatacaattttatgtcggtttt 41388230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 11635819 - 11635871
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||| ||| |||| |||||||||||| |||||||| |||||||||| ||||||    
T  11635819 tcaatgatcataggtctattttgcgaaattttatataattttgtgtcggtttt 11635871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 41169877 - 41169921
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtt 322  Q
    ||||||| ||||||||||||||||||||| |||||| ||| ||||    
T  41169877 attataggtctattttgcgagattttatataattttatgtcggtt 41169921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 324
Target Start/End: Original strand, 19048 - 19157
Alignment:
Q  215 tggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaattttg 314  Q
    |||||||||||||| |||||||||||||||||||||||||||||             |||||||| |||| |||||||||||||||||||| ||||||||    
T  19048 tggcggagcccttcatgggctggggtgggccacggcccacccggaaaaataaaaaaatcaacgatcataggtctattttgcgagattttatgcaattttg 19147  T
Q  315 tgttggtttt 324  Q
    ||| ||||||    
T  19148 tgtcggtttt 19157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 19224 - 19270
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  19224 attatagatctattttgcgagattttatacaattttatgtcggtttt 19270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 64933 - 65045
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||              ||||| |||||| |||||||||||||||||||| |||||    
T  64933 cagtggcggagcccttcatgggctggggtgggccacggcccacccggaaaaattaaaaaaacaacgcttataggtctattttgcgagattttatgcaatt 65032  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  65033 ttgtgtcggtttt 65045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 65226 - 65272
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  65226 attataggtctattttgcgagattttatacaattttatgtcggtttt 65272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 65112 - 65158
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| ||||||||| |||||||||||||||||| ||| ||||||    
T  65112 attataggtctattttgtgagattttatacaattttatgtcggtttt 65158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 12698493 - 12698606
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnn-tcaacgattatagatctattttgcgagattttatacaat 310  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||              ||||| ||||||| |||||||||||||||||||||||||    
T  12698493 cagtggcggagcccttcatgggctggggtgggccacggccgacccggaaaaatttaaaaaatcaacaattataggtctattttgcgagattttatacaat 12698592  T
Q  311 tttgtgttggtttt 324  Q
    ||||||| ||||||    
T  12698593 tttgtgtcggtttt 12698606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 2660997 - 2660885
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||||||||| ||||||||| ||||||||| |||||||||             ||||||||||||| |||||||||||||||||||| |||||    
T  2660997 cagtggcggagcccttcatgggctgggatgggccacgacccacccggaaaaattaaaaaatcaacgattataggtctattttgcgagattttatgcaatt 2660898  T
Q  312 ttgtgttggtttt 324  Q
    |||| | ||||||    
T  2660897 ttgtatcggtttt 2660885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 24635629 - 24635517
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||             ||||||||||||| |||| ||||||||||||||| |||||    
T  24635629 cagtggcgaagcccttcatgggctggggtgggccacggcccatccggaaaaattaaaaaatcaacgattataggtctaatttgcgagattttatgcaatt 24635530  T
Q  312 ttgtgttggtttt 324  Q
    |||| ||||||||    
T  24635529 ttgtattggtttt 24635517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 13405460 - 13405410
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  13405460 aacgattataggtctattttgcgagattttatacaattttgtgtcggtttt 13405410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 11450667 - 11450551
Alignment:
Q  212 cagtggcggagcccttcctgggctggg----gtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatac 307  Q
    ||||||||||||||||| |||||||||    ||||||||||||||||||||             |||||||||||| |||||||||||||||| |||| |    
T  11450667 cagtggcggagcccttcatgggctgggtggggtgggccacggcccacccggaaaaatttaaatatcaacgattatatatctattttgcgagatcttatgc 11450568  T
Q  308 aattttgtgttggtttt 324  Q
    |||||||||| ||||||    
T  11450567 aattttgtgtcggtttt 11450551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 26468508 - 26468560
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  26468508 tcaactattataggtctattttgcgagattttatacaattttgtgtcggtttt 26468560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 324
Target Start/End: Complemental strand, 9079215 - 9079102
Alignment:
Q  211 ccagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaat 310  Q
    |||||||||||||||||| ||| |||||||||||||| ||||| ||||             ||||||||||||| |||| ||||||||||||||| ||||    
T  9079215 ccagtggcggagcccttcatggactggggtgggccacagcccatccggaaaaattaaaaaatcaacgattataggtctaatttgcgagattttatgcaat 9079116  T
Q  311 tttgtgttggtttt 324  Q
    ||||| | ||||||    
T  9079115 tttgtatcggtttt 9079102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 12996464 - 12996510
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  12996464 attatagatctattttgcgagattttatacaattttatgtcggtttt 12996510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 16461568 - 16461456
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccacccggnnnnnnnnnnnnntcaacgattatagatctattttgcgagattttatacaatt 311  Q
    ||||||||||| ||||| ||| |||||||||| ||||||||||||||             ||||||||||||   ||||||||||||||||||| |||||    
T  16461568 cagtggcggagtccttcatggactggggtgggtcacggcccacccggaaatattaaaaaatcaacgattataagcctattttgcgagattttatgcaatt 16461469  T
Q  312 ttgtgttggtttt 324  Q
    |||||| ||||||    
T  16461468 ttgtgtcggtttt 16461456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 15469149 - 15469201
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||| ||||||    
T  15469149 tcaacgattataggtctattttgcaagattttatgcaattttgtgtcggtttt 15469201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 24130396 - 24130352
Alignment:
Q  214 gtggcggagcccttcctgggctggggtgggccacggcccacccgg 258  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||    
T  24130396 gtggcggagcccttcatgggctggggtgggccactgcccacccgg 24130352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 34023641 - 34023589
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||| |||||||||||| |||||||||| ||||||    
T  34023641 tcaacgattataggtctattttacgagattttatataattttgtgtcggtttt 34023589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 7021996 - 7022042
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  7021996 attataggtctattttgcgagattttatacaattttatgtcggtttt 7022042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 15469268 - 15469314
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  15469268 attataggtctattttgcgagattttatacaattttatgtcggtttt 15469314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 34023522 - 34023476
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  34023522 attatagatctattttacgagattttatacaattttatgtcggtttt 34023476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 7021882 - 7021922
Alignment:
Q  277 gattatagatctattttgcgagattttatacaattttgtgt 317  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  7021882 gattataggtctattttgcgagattttatgcaattttgtgt 7021922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 8560485 - 8560537
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| ||||  |||||||||||||| ||||||||| ||||||||    
T  8560485 tcaacgattataggtctaaattgcgagattttatgcaattttgtattggtttt 8560537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 10290457 - 10290501
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccaccc 256  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||    
T  10290457 cagtggcggagcccttcatgggctagggtgggccatggcccaccc 10290501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 12996343 - 12996395
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||| ||| |||||| |||||||||||||||||||||||||||| | ||||||    
T  12996343 tcaatgataatagatatattttgcgagattttatacaattttgtatcggtttt 12996395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 34127557 - 34127609
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||| ||||||  |||||||||||||||||||||||||||||| | ||||||    
T  34127557 tcaactattataagtctattttgcgagattttatacaattttgtatcggtttt 34127609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Complemental strand, 2660818 - 2660783
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  2660818 attataggtctattttgcgagattttatacaatttt 2660783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 317
Target Start/End: Original strand, 7536518 - 7536561
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgt 317  Q
    |||||||||||||||||||||   ||||||||||||||||||||    
T  7536518 aacgattatagatctattttgtaggattttatacaattttgtgt 7536561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Original strand, 8560604 - 8560639
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||||||||||||| ||||||||||||||||||    
T  8560604 attatagatctattttgtgagattttatacaatttt 8560639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Original strand, 26468627 - 26468662
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  26468627 attataggtctattttgcgagattttatacaatttt 26468662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 314
Target Start/End: Complemental strand, 14883261 - 14883219
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttg 314  Q
    ||||||||||||  ||||||| |||||||||||||||||||||    
T  14883261 tcaacgattataagtctatttcgcgagattttatacaattttg 14883219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 34127676 - 34127722
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||| |||||||||| ||||||||||||||||| ||| ||||||    
T  34127676 attataggtctattttgcaagattttatacaattttatgtcggtttt 34127722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 13405518 - 13405477
Alignment:
Q  216 ggcggagcccttcctgggctggggtgggccacggcccacccg 257  Q
    ||||||||||||| |||| |||||||||||||| ||||||||    
T  13405518 ggcggagcccttcatgggttggggtgggccacgacccacccg 13405477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 324
Target Start/End: Complemental strand, 1398188 - 1398152
Alignment:
Q  288 tattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  1398188 tattttacgagattttatccaattttgtgttggtttt 1398152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 11166 - 11210
Alignment:
Q  212 cagtggcggagcccttcctgggctggggtgggccacggcccaccc 256  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  11166 cagtggcggagcccttcatgggctggggtgggccacggcccaccc 11210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 11237 - 11289
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| | ||||||    
T  11237 tcaacgattatagatttattttgcgagattttatgcaattttgtatcggtttt 11289  T

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Target: scaffold0131; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 11356 - 11402
Alignment:
Q  278 attatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  11356 attatagatcaattttgcgagattttatacaattttatgtcggtttt 11402  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 313
Target Start/End: Original strand, 331950 - 331985
Alignment:
Q  278 attatagatctattttgcgagattttatacaatttt 313  Q
    ||||||||||||||||||||||||||||||||||||    
T  331950 attatagatctattttgcgagattttatacaatttt 331985  T

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Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 331831 - 331883
Alignment:
Q  272 tcaacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||| | ||||||    
T  331831 tcaacgattataggtctattttgcaagattttatgcaattttgtatcggtttt 331883  T

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Target: scaffold0978 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 1290 - 1328
Alignment:
Q  286 tctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  1290 tctattttgcgagattttatacaattttatgtcggtttt 1328  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 82941 - 82891
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    ||||| ||||| |||||| |||||||||||||||| |||||||| ||||||    
T  82941 aacgactataggtctattatgcgagattttatacacttttgtgtcggtttt 82891  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 303915 - 303865
Alignment:
Q  274 aacgattatagatctattttgcgagattttatacaattttgtgttggtttt 324  Q
    |||||||| |||| ||||||| |||||||||||||||||| ||| ||||||    
T  303915 aacgattaaagatttattttgtgagattttatacaattttatgtcggtttt 303865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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