View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10540_low_10 (Length: 288)
Name: NF10540_low_10
Description: NF10540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10540_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 17 - 275
Target Start/End: Complemental strand, 3661454 - 3661196
Alignment:
| Q |
17 |
tacaaaccatttcctccgtcctcctttctccacaactcaaccacctcgtacaccacaatctcgtacacgaccacctcgtacacgacaacctcgtacacca |
116 |
Q |
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| T |
3661454 |
tacaaaccatttcctccgtcctcctttctccacaactcaaccacctcgtacaccacaatctcgtacacgaccacctcgtacacgacaacctcgtacacca |
3661355 |
T |
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| Q |
117 |
ccccaaatcacaaacccttcatcaaaatcatcaatctacactctcttctctcattaaccgcattgaatctcttgaatcttctctcaatcaacatcaaacc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3661354 |
ccccaaatcacaaacccttcatcaaaatcatcaatccacactctcttctctcattaaccgcattgaatctcttgaatcttctctcaatcaacatcaaacc |
3661255 |
T |
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| Q |
217 |
catcaatctcaatctccgcgtcattctgcagcacgtgtaatccaaacccatttccgttc |
275 |
Q |
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|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
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| T |
3661254 |
catcaatctcaatctctccgtcattctgctgcacgtgtaatccaaacccatttccgttc |
3661196 |
T |
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