View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10540_low_11 (Length: 285)

Name: NF10540_low_11
Description: NF10540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10540_low_11
NF10540_low_11
[»] chr3 (22 HSPs)
chr3 (8-273)||(14865711-14865976)
chr3 (8-275)||(17131595-17131862)
chr3 (13-275)||(12033375-12033636)
chr3 (14-273)||(19235002-19235257)
chr3 (13-138)||(23370435-23370560)
chr3 (8-155)||(51301572-51301720)
chr3 (26-215)||(13302185-13302372)
chr3 (26-215)||(13312841-13313028)
chr3 (26-215)||(13323732-13323920)
chr3 (69-142)||(10389429-10389502)
chr3 (69-142)||(10414518-10414591)
chr3 (69-142)||(10421188-10421261)
chr3 (42-135)||(24933787-24933880)
chr3 (84-222)||(17240513-17240652)
chr3 (84-138)||(9534328-9534382)
chr3 (84-138)||(18929246-18929300)
chr3 (8-96)||(10555353-10555439)
chr3 (86-138)||(20247791-20247843)
chr3 (86-138)||(24192957-24193009)
chr3 (83-135)||(41455097-41455149)
chr3 (83-138)||(16801467-16801521)
chr3 (84-138)||(14762758-14762812)
[»] scaffold0053 (1 HSPs)
scaffold0053 (8-273)||(79414-79680)
[»] chr1 (10 HSPs)
chr1 (8-274)||(20851057-20851323)
chr1 (8-274)||(20857684-20857950)
chr1 (8-274)||(21706140-21706406)
chr1 (8-275)||(21710682-21710948)
chr1 (42-136)||(20044910-20045004)
chr1 (84-157)||(18712780-18712854)
chr1 (84-138)||(20437024-20437078)
chr1 (84-138)||(32651573-32651627)
chr1 (83-135)||(41112038-41112090)
chr1 (84-138)||(19663517-19663571)
[»] chr8 (8 HSPs)
chr8 (8-274)||(24320595-24320861)
chr8 (84-261)||(29643386-29643564)
chr8 (8-138)||(44477623-44477754)
chr8 (8-138)||(44492781-44492912)
chr8 (84-169)||(18614240-18614327)
chr8 (84-222)||(23482053-23482192)
chr8 (86-138)||(8727735-8727787)
chr8 (83-135)||(23866618-23866670)
[»] chr7 (26 HSPs)
chr7 (8-273)||(16090940-16091206)
chr7 (8-275)||(20906386-20906652)
chr7 (8-273)||(29181033-29181299)
chr7 (8-183)||(2971209-2971384)
chr7 (177-275)||(2966828-2966926)
chr7 (8-142)||(14319554-14319688)
chr7 (23-255)||(2465246-2465474)
chr7 (8-142)||(14230777-14230911)
chr7 (23-255)||(3857308-3857536)
chr7 (13-138)||(14567204-14567329)
chr7 (69-136)||(31155396-31155463)
chr7 (84-138)||(11382871-11382925)
chr7 (84-138)||(11389348-11389402)
chr7 (76-138)||(21230952-21231014)
chr7 (83-138)||(14422985-14423040)
chr7 (84-138)||(16009577-16009631)
chr7 (83-135)||(12590643-12590695)
chr7 (83-135)||(13007435-13007487)
chr7 (82-138)||(20311050-20311106)
chr7 (84-138)||(13679494-13679548)
chr7 (84-138)||(15168176-15168230)
chr7 (83-135)||(12709843-12709895)
chr7 (83-135)||(13122914-13122966)
chr7 (83-135)||(13743712-13743764)
chr7 (86-138)||(16677296-16677348)
chr7 (86-138)||(17651532-17651584)
[»] chr5 (21 HSPs)
chr5 (8-274)||(19236765-19237030)
chr5 (8-274)||(22461020-22461286)
chr5 (8-274)||(22467644-22467910)
chr5 (14-275)||(20772834-20773090)
chr5 (14-275)||(20781609-20781865)
chr5 (14-261)||(24929862-24930105)
chr5 (8-261)||(28909215-28909466)
chr5 (8-261)||(28945610-28945861)
chr5 (8-261)||(28895967-28896218)
chr5 (8-261)||(28924793-28925044)
chr5 (8-261)||(28889263-28889514)
chr5 (75-252)||(20820105-20820279)
chr5 (75-252)||(20827205-20827379)
chr5 (76-261)||(34829962-34830146)
chr5 (18-138)||(38144472-38144591)
chr5 (84-222)||(18407944-18408083)
chr5 (84-222)||(23111200-23111339)
chr5 (82-138)||(22438746-22438802)
chr5 (84-138)||(19512387-19512441)
chr5 (84-138)||(28370055-28370109)
chr5 (83-135)||(23528634-23528686)
[»] scaffold0072 (1 HSPs)
scaffold0072 (8-273)||(49894-50161)
[»] chr6 (26 HSPs)
chr6 (8-274)||(20007872-20008138)
chr6 (14-273)||(9099005-9099260)
chr6 (23-255)||(21364423-21364650)
chr6 (23-255)||(23968405-23968632)
chr6 (13-261)||(31252300-31252549)
chr6 (8-136)||(11288596-11288721)
chr6 (69-136)||(15458492-15458559)
chr6 (69-136)||(15465087-15465154)
chr6 (8-138)||(34639910-34640041)
chr6 (8-138)||(34646584-34646715)
chr6 (8-111)||(28288437-28288537)
chr6 (76-138)||(10986173-10986235)
chr6 (8-101)||(24563475-24563569)
chr6 (83-138)||(29614146-29614201)
chr6 (84-138)||(4477858-4477912)
chr6 (84-138)||(23839199-23839253)
chr6 (76-138)||(24512836-24512898)
chr6 (8-45)||(24641607-24641644)
chr6 (83-135)||(12168366-12168418)
chr6 (83-135)||(19287275-19287327)
chr6 (83-135)||(19785869-19785921)
chr6 (83-135)||(19878459-19878511)
chr6 (83-138)||(930095-930150)
chr6 (83-138)||(18800438-18800493)
chr6 (84-136)||(9187498-9187550)
chr6 (83-135)||(19884235-19884287)
[»] scaffold0023 (1 HSPs)
scaffold0023 (8-273)||(135304-135568)
[»] chr2 (14 HSPs)
chr2 (34-275)||(25180880-25181121)
chr2 (36-274)||(10441-10679)
chr2 (8-142)||(27207644-27207778)
chr2 (8-142)||(26885179-26885312)
chr2 (8-261)||(23168224-23168480)
chr2 (8-261)||(23579481-23579737)
chr2 (84-222)||(23265058-23265197)
chr2 (84-222)||(23280126-23280265)
chr2 (8-101)||(27366472-27366566)
chr2 (8-135)||(5705947-5706075)
chr2 (84-138)||(6483718-6483772)
chr2 (84-138)||(6487185-6487239)
chr2 (84-138)||(21908360-21908414)
chr2 (83-135)||(26583830-26583882)
[»] chr4 (7 HSPs)
chr4 (45-273)||(16146791-16147020)
chr4 (76-261)||(27906142-27906328)
chr4 (86-197)||(14486601-14486713)
chr4 (8-135)||(53483708-53483836)
chr4 (82-138)||(15408140-15408196)
chr4 (83-138)||(11848114-11848169)
chr4 (83-135)||(8045832-8045884)
[»] scaffold1318 (1 HSPs)
scaffold1318 (8-222)||(1837-2051)
[»] scaffold0348 (1 HSPs)
scaffold0348 (78-273)||(9201-9396)
[»] scaffold0131 (1 HSPs)
scaffold0131 (8-248)||(889-1126)
[»] scaffold0127 (1 HSPs)
scaffold0127 (13-222)||(10156-10364)
[»] scaffold0001 (1 HSPs)
scaffold0001 (8-217)||(492953-493162)
[»] scaffold1469 (1 HSPs)
scaffold1469 (69-261)||(1234-1424)
[»] scaffold0384 (1 HSPs)
scaffold0384 (42-254)||(16023-16233)
[»] scaffold0553 (2 HSPs)
scaffold0553 (13-138)||(10125-10250)
scaffold0553 (42-111)||(11042-11111)
[»] scaffold0544 (1 HSPs)
scaffold0544 (13-138)||(1455-1580)
[»] scaffold0029 (3 HSPs)
scaffold0029 (23-255)||(91144-91374)
scaffold0029 (23-255)||(96870-97100)
scaffold0029 (83-136)||(111885-111938)
[»] scaffold0609 (1 HSPs)
scaffold0609 (8-261)||(5781-6035)
[»] scaffold0720 (1 HSPs)
scaffold0720 (8-142)||(3327-3461)
[»] scaffold0183 (1 HSPs)
scaffold0183 (14-136)||(6-125)
[»] scaffold0261 (1 HSPs)
scaffold0261 (76-261)||(23562-23748)
[»] scaffold0249 (1 HSPs)
scaffold0249 (69-136)||(13880-13947)
[»] scaffold0026 (2 HSPs)
scaffold0026 (8-138)||(111686-111817)
scaffold0026 (83-138)||(11850-11905)
[»] scaffold0107 (1 HSPs)
scaffold0107 (76-275)||(40524-40725)
[»] scaffold0034 (1 HSPs)
scaffold0034 (76-261)||(73161-73347)
[»] scaffold0453 (1 HSPs)
scaffold0453 (79-142)||(10546-10609)
[»] scaffold0222 (1 HSPs)
scaffold0222 (84-222)||(16736-16875)
[»] scaffold0019 (1 HSPs)
scaffold0019 (82-261)||(135349-135530)
[»] scaffold2054 (1 HSPs)
scaffold2054 (83-136)||(717-770)
[»] scaffold0099 (1 HSPs)
scaffold0099 (85-261)||(12833-13019)
[»] scaffold0146 (1 HSPs)
scaffold0146 (84-222)||(13548-13687)
[»] scaffold0129 (1 HSPs)
scaffold0129 (8-135)||(45198-45326)
[»] scaffold0004 (1 HSPs)
scaffold0004 (84-157)||(116877-116951)
[»] scaffold0235 (1 HSPs)
scaffold0235 (26-137)||(22536-22646)
[»] scaffold0924 (1 HSPs)
scaffold0924 (83-138)||(750-805)
[»] scaffold0461 (1 HSPs)
scaffold0461 (84-222)||(8-147)
[»] scaffold0247 (1 HSPs)
scaffold0247 (83-138)||(11342-11397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (83-138)||(30858-30913)
[»] scaffold0020 (1 HSPs)
scaffold0020 (84-157)||(101928-102002)
[»] scaffold0796 (2 HSPs)
scaffold0796 (42-135)||(1691-1784)
scaffold0796 (42-135)||(5714-5807)
[»] scaffold0310 (1 HSPs)
scaffold0310 (82-138)||(17644-17700)
[»] scaffold0025 (1 HSPs)
scaffold0025 (86-138)||(14398-14450)
[»] scaffold0456 (2 HSPs)
scaffold0456 (83-138)||(932-987)
scaffold0456 (83-138)||(8077-8132)
[»] scaffold0090 (1 HSPs)
scaffold0090 (83-138)||(18170-18225)
[»] scaffold1461 (1 HSPs)
scaffold1461 (84-142)||(1485-1543)
[»] scaffold0317 (1 HSPs)
scaffold0317 (84-138)||(1387-1441)
[»] scaffold0124 (1 HSPs)
scaffold0124 (84-138)||(34276-34330)
[»] scaffold1773 (1 HSPs)
scaffold1773 (74-135)||(1181-1242)
[»] scaffold0117 (2 HSPs)
scaffold0117 (83-136)||(1897-1950)
scaffold0117 (83-136)||(8574-8627)
[»] scaffold0058 (1 HSPs)
scaffold0058 (83-135)||(294-346)
[»] scaffold0006 (1 HSPs)
scaffold0006 (83-135)||(50182-50234)


Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 8 - 273
Target Start/End: Complemental strand, 14865976 - 14865711
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14865976 aagctaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatcttt 14865877  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggt 207  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14865876 caatagtcataatatgtaatttctgaaaattaatcaattaaactgttcttaaggtaaaattgggaaaataatggttaatgatgattttgaaagaaaaggt 14865777  T
Q  208 ataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgat 273  Q
     |||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14865776 gtaagaagcaggtttataatgttgtacttggatgattagtatgatttcttaatccatgttgttgat 14865711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 17131862 - 17131595
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  17131862 aagctaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatcttt 17131763  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  17131762 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggt 17131663  T
Q  208 ataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatgt 275  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  17131662 ataaggatcaggtttataatgttgtactttgatgtttagtatgatttcttaatctatgttgttgatgt 17131595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 13 - 275
Target Start/End: Original strand, 12033375 - 12033636
Alignment:
Q  13 aaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaata 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  12033375 aaggtaaggagagaagaccaagagagaagaacttaggaactgatttgatgtgctt-ttgtctttgcaattctaaggtaagggtgggattatctttcaata 12033473  T
Q  113 gtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataag 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12033474 gtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaattaagggttaatgatgattttgaaagaaaaggtataag 12033573  T
Q  213 aatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatgt 275  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  12033574 aatcaggtttataatgttgtactttgatgtttagtatgatttcttaatctatgttgttgatgt 12033636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 273
Target Start/End: Original strand, 19235002 - 19235257
Alignment:
Q  14 aggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatag 113  Q
    |||||||| |||||||||||||||||||| |||||||| ||||||||||  ||  || ||||||||||||||||||||||||||||||||||||||||||    
T  19235002 aggcaagg-gagaagaccaagagagaagagcttaggaattgatttgctgcact--ttatctttgcaattctaaggtaagggtgggattatctttcaatag 19235098  T
Q  114 tcataatatataatttctg-aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataag 212  Q
    | ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| || ||||||| || ||||    
T  19235099 ttataatatatgatttctgaaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattctg-aagaaaatgtgtaag 19235197  T
Q  213 aatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgat 273  Q
    |||||||||| |||||||||| ||||||||||||||||||||| ||||| || ||||||||    
T  19235198 aatcaggtttataatgttgta-tttgatgattagtatgatttcctaatctatattgttgat 19235257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 23370435 - 23370560
Alignment:
Q  13 aaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaata 112  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||| | |||||||||||||||||||||| ||||| ||||||    
T  23370435 aaggcaaggagagaagaccaagagagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaata 23370534  T
Q  113 gtcataatatataatttctgaaaatt 138  Q
     ||||||| |||||||||||||||||    
T  23370535 atcataatctataatttctgaaaatt 23370560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 51301720 - 51301572
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaa--ttgtctttgcaattctaaggtaagggtgggattatct 105  Q
    |||| |||||||||||||||||||||||||||||||||   |||  |||| |||||| |    ||||||| |||||||||||||||||||| ||||||||    
T  51301720 aagctaaggcaaggagagaagaccaagagagaagaactagagaatcgatt-gctgtgttttctttgtcttcgcaattctaaggtaagggtgagattatct 51301622  T
Q  106 ttcaatagtcataatatataatttctgaaaattaatcaattgaactgttc 155  Q
    | ||||| ||||||||| |||||||||||||||||||||||||| |||||    
T  51301621 tccaataatcataatatgtaatttctgaaaattaatcaattgaattgttc 51301572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 215
Target Start/End: Original strand, 13302185 - 13302372
Alignment:
Q  26 aagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatata 125  Q
    |||| |||| |||| |||| ||||||||||||||||||| |  || |||   ||||||||||||||||||| ||||||||||||||| ||||||||| ||    
T  13302185 aagaacaagggagatgaacctaggaactgatttgctgtgttttttttcta--caattctaaggtaagggtgagattatctttcaataatcataatatgta 13302282  T
Q  126 atttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaat 215  Q
    ||||||||||||||||||| || | ||||||| ||| ||||| |||| || | |||||| ||||||| || ||||| || ||| |||||||    
T  13302283 atttctgaaaattaatcaaatgcattgttcttgaagataaaa-tggggaatttagggttgatgatgacttcgaaaggaatggtgtaagaat 13302372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 215
Target Start/End: Original strand, 13312841 - 13313028
Alignment:
Q  26 aagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatata 125  Q
    |||| |||| |||| |||| ||||||||||||||||||| |  || |||   ||||||||||||||||||| ||||||||||||||| ||||||||| ||    
T  13312841 aagaacaagggagatgaacctaggaactgatttgctgtgttttttttcta--caattctaaggtaagggtgagattatctttcaataatcataatatgta 13312938  T
Q  126 atttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaat 215  Q
    |||| |||||||||||||| || | ||||||| ||| |||||| ||| || | |||||| ||||||| || ||||| || ||| |||||||    
T  13312939 atttttgaaaattaatcaaatggattgttcttgaagataaaataggg-aatttagggttgatgatgacttcgaaaggaatggtgtaagaat 13313028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 215
Target Start/End: Original strand, 13323732 - 13323920
Alignment:
Q  26 aagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatata 125  Q
    |||| |||| ||||||||| |||||||||||||||||   |  || |||   ||||||||||||||||||| ||||||||||||||| ||||||||| ||    
T  13323732 aagaacaagggagaagaacctaggaactgatttgctgatttttttttcta--caattctaaggtaagggtgagattatctttcaataatcataatatgta 13323829  T
Q  126 atttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaat 215  Q
    ||||||||||||||||| ||||  | ||||||| ||| |||||||||| || | |||||| ||||||| || ||||| || ||| |||||||    
T  13323830 atttctgaaaattaatcaaattagattgttcttgaagataaaattggg-aatttagggttgatgatgacttcgaaaggaatggtgtaagaat 13323920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 10389429 - 10389502
Alignment:
Q  69 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 142  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||| |||||    
T  10389429 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10389502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 10414518 - 10414591
Alignment:
Q  69 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 142  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||| |||||    
T  10414518 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10414591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 10421188 - 10421261
Alignment:
Q  69 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 142  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||| |||||    
T  10421188 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10421261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 24933787 - 24933880
Alignment:
Q  42 aacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    ||||||||| ||||||||| ||| ||||| |   | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  24933787 aacttaggagctgatttgcggtgttaattcttcctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 24933880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 17240513 - 17240652
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 180  Q
    ||||||||||||| || ||||| |||||| || ||||| |||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 17240610  T
Q  181 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 222  Q
    ||| ||| |||||||||||| || ||| ||||||||| ||||    
T  17240611 gttgatgctgattttgaaaggaatggtgtaagaatcatgttt 17240652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 9534382 - 9534328
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 9534328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 18929300 - 18929246
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| |||||| |||| ||||||||||||||||||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaatt 18929246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 10555439 - 10555353
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtg 96  Q
    |||| ||||||||| |||||||||||||||||||| |||||| | |||||||  || ||  |||| ||| |||||||||||||||||||    
T  10555439 aagctaaggcaagg-gagaagaccaagagagaagagcttagggattgatttgtcgtact-tttgtgtttacaattctaaggtaagggtg 10555353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 20247791 - 20247843
Alignment:
Q  86 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 20247843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 24193009 - 24192957
Alignment:
Q  86 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 24192957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 41455097 - 41455149
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  41455097 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 41455149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 16801467 - 16801521
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    |||||||||||||| || ||||| |||||| |||| ||||||||||||||||||||    
T  16801467 ctaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaatt 16801521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 14762758 - 14762812
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 14762812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 79414 - 79680
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgattt-gctgtgctaattgtctttgcaattctaaggtaagggtgggattatctt 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  79414 aagctaaggcaaggagagaagaccaagagagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctt 79513  T
Q  107 tcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaagg 206  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  79514 tcaatagtcataatatgtaatttctgaaaattaatcaattaaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaagg 79613  T
Q  207 tataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgat 273  Q
    | |||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  79614 tgtaagaatcaggtttataatgttgtatttgaatgattagtatgatttcttaatccatgttgttgat 79680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 8 - 274
Target Start/End: Original strand, 20851057 - 20851323
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  20851057 aagctaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatcttt 20851156  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  20851157 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggt 20851256  T
Q  208 ataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatg 274  Q
    ||||| ||||||||| || ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  20851257 ataaggatcaggtttatattgttgtactttgatgtttagtatgatttcttaatctatgttgttgatg 20851323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 274
Target Start/End: Original strand, 20857684 - 20857950
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  20857684 aagctaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatcttt 20857783  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  20857784 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggt 20857883  T
Q  208 ataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatg 274  Q
    ||||| ||||||||| || ||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  20857884 ataaggatcaggtttatattgttgtactttgatgtttagtatgttttcttaatctatgttgttgatg 20857950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 274
Target Start/End: Complemental strand, 21706406 - 21706140
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  21706406 aagctaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatcttt 21706307  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  21706306 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggt 21706207  T
Q  208 ataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatg 274  Q
    ||||| ||||||||| || ||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  21706206 ataaggatcaggtttatattgttgtactttgatgtttagtatgttttcttaatctatgttgttgatg 21706140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 21710948 - 21710682
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  21710948 aagctaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatcttt 21710849  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| | |||||||||||||||||| ||    
T  21710848 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggtttaagatgattttgaaagaaaaagt 21710749  T
Q  208 ataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatgt 275  Q
    ||||| ||||||||| ||||||| ||| |||||| ||||||||||| ||||||| |||||||||||||    
T  21710748 ataaggatcaggtttataatgttatac-ttgatgtttagtatgattccttaatctatgttgttgatgt 21710682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 20044910 - 20045004
Alignment:
Q  42 aacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 136  Q
    ||||||||| ||||||||||||| ||||| |   | ||||||||||||||||||||||||||| ||||||  || |||||||||| |||||||||    
T  20044910 aacttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatccttcaatgatcttaatatataaattctgaaaa 20045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 18712854 - 18712780
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 157  Q
    ||||||| ||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 18712780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 20437024 - 20437078
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 20437078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 32651627 - 32651573
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 32651573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 41112090 - 41112038
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  41112090 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 41112038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 19663517 - 19663571
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| || ||| ||||| |||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaatt 19663571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 274
Target Start/End: Original strand, 24320595 - 24320861
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  24320595 aagctaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatcttt 24320694  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  24320695 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggt 24320794  T
Q  208 ataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatg 274  Q
    ||| | ||||||||| || ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  24320795 atagggatcaggtttatattgttgtactttgatgtttagtatgatttcttaatctatgttgttgatg 24320861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 261
Target Start/End: Original strand, 29643386 - 29643564
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttc-ttaaggtaaaattgggaaaataaggg 181  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||||||| ||||| | ||| |||||||| | || ||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaaattgaattgttcatgaagataaaattgag-aattaaggg 29643484  T
Q  182 ttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
    || |||||||||| | ||| |  ||| |||||||  ||||  |  ||||||| |||| || | |||||||||||||||||    
T  29643485 ttgatgatgatttaggaaggattggtgtaagaattgggttaattgtgttgtaatttggtgttcagtatgatttcttaatc 29643564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 44477754 - 44477623
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaa--ttgtctttgcaattctaaggtaagggtgggattatct 105  Q
    |||| |||||||||||||||||||||||||||||||||   |||  |||| |||||| |    |||||||  ||||||||||||||||||| || |||||    
T  44477754 aagctaaggcaaggagagaagaccaagagagaagaactagagaatcgatt-gctgtgttttctttgtcttcacaattctaaggtaagggtgagactatct 44477656  T
Q  106 ttcaatagtcataatatataatttctgaaaatt 138  Q
     |||||| ||||||| |||||||||||||||||    
T  44477655 ctcaataatcataatctataatttctgaaaatt 44477623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 44492912 - 44492781
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaa--ttgtctttgcaattctaaggtaagggtgggattatct 105  Q
    |||| |||||||||||||||||||||||||||||||||   |||  |||| |||||| |    |||||||  ||||||||||||||||||| || |||||    
T  44492912 aagctaaggcaaggagagaagaccaagagagaagaactagagaatcgatt-gctgtgttttctttgtcttcacaattctaaggtaagggtgagactatct 44492814  T
Q  106 ttcaatagtcataatatataatttctgaaaatt 138  Q
     |||||| ||||||| |||||||||||||||||    
T  44492813 ctcaataatcataatctataatttctgaaaatt 44492781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 18614327 - 18614240
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaat-caattgaactgttctt-aaggtaaaattg 169  Q
    ||||||||||||| || ||||| |||||| |||| |||||||||||||||||||| || |||||||| ||||||| ||| ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattg 18614240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 23482053 - 23482192
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 180  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 23482150  T
Q  181 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 222  Q
    ||| ||| ||||||||||||  | ||| ||||||||| ||||    
T  23482151 gttgatgctgattttgaaagggatggtgtaagaatcatgttt 23482192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 8727735 - 8727787
Alignment:
Q  86 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||| |||||||  |||||| ||||||| |||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaatt 8727787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 23866670 - 23866618
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  23866670 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 23866618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 8 - 273
Target Start/End: Complemental strand, 16091206 - 16090940
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgattt-gctgtgctaattgtctttgcaattctaaggtaagggtgggattatctt 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16091206 aagctaaggcaaggagagaagaccaagagagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctt 16091107  T
Q  107 tcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaagg 206  Q
    |||||||||||||||| |||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16091106 tcaatagtcataatatgtaatttctgaaagttaatcaattaaactgttcctaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaagg 16091007  T
Q  207 tataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgat 273  Q
    | |||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  16091006 tgtaagaatcaggtttataatgttgtatttgaatgattagtatgatttcttaatccatgttgttgat 16090940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 20906386 - 20906652
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  20906386 aagctaaggcaaggggagaagaccaagagagaagaacttaggaacggatttgctgagctatttgtccttgcaattctaaggtaagggtgggattatcttt 20906485  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  20906486 caatagtcataatatataatttctgaaaattaatcaattgaactattcttaaggtaaaattggg-aattaagggttaatgatgattttgaaagaaaaggt 20906584  T
Q  208 ataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatgt 275  Q
    |||||||||| |||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  20906585 ataagaatcaagtttataatgttgtactttgatgtttagtatgatttcttaatctatgttgttgatgt 20906652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 29181033 - 29181299
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgattt-gctgtgctaattgtctttgcaattctaaggtaagggtgggattatctt 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29181033 aagctaaggcaaggagagaagaccaagagagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctt 29181132  T
Q  107 tcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaagg 206  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29181133 tcaatagtcataatatgtaatttctgaaaattaatcaattaaactattcttaaggtaaaatttggaaaataagggttaatgatgattttgaaagaaaagg 29181232  T
Q  207 tataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgat 273  Q
    | ||||||||||| || |||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  29181233 tgtaagaatcaggcttataatgttgtatttgaatgattagtatgatttcttaatccatgttgttgat 29181299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 2971384 - 2971209
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  2971384 aagctaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatcttt 2971285  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggtt 183  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2971284 caatagtcataatttataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaagataagggtt 2971209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 2966926 - 2966828
Alignment:
Q  177 aagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatgt 275  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2966926 aagggttaatgatgtttttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatgt 2966828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 14319554 - 14319688
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  14319554 aagctaaggcaaggagagaagactaagagagaagaacttaggaacggatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatcttt 14319653  T
Q  108 caatagtcataatatataatttctgaaaattaatc 142  Q
    ||||  |  |||| |||||||||||||||||||||    
T  14319654 caatgattttaatgtataatttctgaaaattaatc 14319688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 23 - 255
Target Start/End: Complemental strand, 2465474 - 2465246
Alignment:
Q  23 gagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatat 122  Q
    |||||||||||||||||||| ||||| || || |||||||  ||  || ||||||||||||||||||||||||||||| ||| ||||||| | |||||||    
T  2465474 gagaagaccaagagagaagagcttagaaattggtttgctgcact--ttatctttgcaattctaaggtaagggtgggatcatccttcaataatgataatat 2465377  T
Q  123 ataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggttt 222  Q
    || ||||||||||||||| ||||| ||||||| ||| ||||||| | || |||| ||||||||||   |||||| ||||||| || ||||| | ||||||    
T  2465376 atgatttctgaaaattaagcaatttaactgtttttatggtaaaaattgggaaattagggttaatggcaattttg-aagaaaatgtgtaagatttaggttt 2465278  T
Q  223 ttaatgttgtactttgatgattagtatgatttc 255  Q
     ||||||| || ||||||||||| |||||||||    
T  2465277 ataatgttata-tttgatgattaatatgatttc 2465246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 14230911 - 14230777
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| |||||||||||||||||||||||||| ||||||||||||| ||||||  |||||  |||||||||||||||||||||||||||||||||||||||    
T  14230911 aagctaaggcaaggagagaagaccaagagaggagaacttaggaacggatttgtcgtgctttttgtctttgcaattctaaggtaagggtgggattatcttt 14230812  T
Q  108 caatagtcataatatataatttctgaaaattaatc 142  Q
    ||||     |||| |||||||||||||||||||||    
T  14230811 caatgaatttaatgtataatttctgaaaattaatc 14230777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 255
Target Start/End: Original strand, 3857308 - 3857536
Alignment:
Q  23 gagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatat 122  Q
    |||||||||||||||||||| ||||| || || |||||||  ||  || |||| |||||||||||||||||||||||| ||||| ||||| | |||||||    
T  3857308 gagaagaccaagagagaagagcttagaaattggtttgctgcact--ttatctt-gcaattctaaggtaagggtgggatcatctt-caataatgataatat 3857403  T
Q  123 ataatttctgaaaattaatcaattgaactgttcttaaggt---aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcagg 219  Q
    || ||||||||||||||| ||||| ||||||| ||| |||   ||||||||| |||| ||||||||||   |||||| ||||||| || ||||| | |||    
T  3857404 atgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaattggg-aaattagggttaatggcaattttg-aagaaaatgtgtaagatttagg 3857501  T
Q  220 tttttaatgttgtactttgatgattagtatgatttc 255  Q
    ||| |||||||||| ||||||||||| |||||||||    
T  3857502 tttataatgttgta-tttgatgattaatatgatttc 3857536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 14567329 - 14567204
Alignment:
Q  13 aaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaata 112  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||  |||||| | ||||||||||||||||||| |  || | ||||||     
T  14567329 aaggcaaggagaaaagaccaagagagaagaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgaggctaaccttcaatg 14567230  T
Q  113 gtcataatatataatttctgaaaatt 138  Q
     | |||||||||  ||||||||||||    
T  14567229 attataatatatggtttctgaaaatt 14567204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 31155463 - 31155396
Alignment:
Q  69 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 136  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  31155463 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 31155396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 11382871 - 11382925
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| |||||| |||||||||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaatt 11382925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 11389348 - 11389402
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| |||||| |||||||||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaatt 11389402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 21230952 - 21231014
Alignment:
Q  76 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||| ||||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  21230952 tgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 21231014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 14423040 - 14422985
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  14423040 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 14422985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 16009631 - 16009577
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 16009577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 12590643 - 12590695
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  12590643 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 12590695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 13007487 - 13007435
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  13007487 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 13007435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 20311050 - 20311106
Alignment:
Q  82 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||||| || ||||| |||||| ||||||  |||||||||||||||||    
T  20311050 tctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaatt 20311106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 13679548 - 13679494
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || |||||||||||  |||| ||||||||||| ||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaatt 13679494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 15168230 - 15168176
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 15168176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 12709843 - 12709895
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  12709843 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 12709895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 13122914 - 13122966
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  13122914 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 13122966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 13743764 - 13743712
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  13743764 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 13743712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 16677348 - 16677296
Alignment:
Q  86 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||| ||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaatt 16677296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 17651584 - 17651532
Alignment:
Q  86 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||| ||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaatt 17651532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 8 - 274
Target Start/End: Complemental strand, 19237030 - 19236765
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  19237030 aagctaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatcttt 19236931  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  19236930 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggt 19236831  T
Q  208 ataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatg 274  Q
    ||||| ||||||||| || ||||||||||||| | ||||||||  ||||||||| ||||||||||||    
T  19236830 ataaggatcaggtttatattgttgtactttga-gtttagtatgtgttcttaatctatgttgttgatg 19236765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 8 - 274
Target Start/End: Complemental strand, 22461286 - 22461020
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  22461286 aagctaaggcaaggagagaagaccaagagagaagaacttaagaactgatttgctgtgccttttgtctttgcaattctaaggtaagggtgggattatcttt 22461187  T
Q  108 caatagtcataatatataatttctg-aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaagg 206  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| ||||||||||||||    
T  22461186 caatagtcataatatataatttctgaaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatga-tttgaaagaaaagg 22461088  T
Q  207 tataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatg 274  Q
    |||||| ||||||||| || ||| ||||||||||| |||||||| ||||||| || ||||||||||||    
T  22461087 tataaggatcaggtttatattgtcgtactttgatgtttagtatgttttcttattctatgttgttgatg 22461020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 8 - 274
Target Start/End: Complemental strand, 22467910 - 22467644
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  22467910 aagctaaggcaaggagagaagaccaagagagaagaacttaagaactgatttgctgtgccttttgtctttgcaattctaaggtaagggtgggattatcttt 22467811  T
Q  108 caatagtcataatatataatttctg-aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaagg 206  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| ||||||||||||||    
T  22467810 caatagtcataatatataatttctgaaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatga-tttgaaagaaaagg 22467712  T
Q  207 tataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatg 274  Q
    |||||| ||||||||| || ||| ||||||||||| |||||||| ||||||| || ||||||||||||    
T  22467711 tataaggatcaggtttatattgtcgtactttgatgtttagtatgttttcttattctatgttgttgatg 22467644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 20773090 - 20772834
Alignment:
Q  14 aggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatag 113  Q
    |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||||||    
T  20773090 aggcaagg-gagaagaccaagagagaagagcttaggaattgatttgctgtact--ttatctttgcaattctaaggtaagggtgggattatctttcaatag 20772994  T
Q  114 tcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataaga 213  Q
    | ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| || |||||    
T  20772993 ttataatatatgatttctgaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattttg-aagaaaatgtgtaaga 20772895  T
Q  214 atcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatgt 275  Q
    ||||||||| |||||||||| ||||||||||||||||||||| || || || ||||||||||    
T  20772894 atcaggtttataatgttgta-tttgatgattagtatgatttcctactctatattgttgatgt 20772834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 20781865 - 20781609
Alignment:
Q  14 aggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatag 113  Q
    |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||  || |||||||||||||||||||||||||||||||||||||||||     
T  20781865 aggcaagg-gagaagaccaagagagaagagcttaggaattgatttgctgtact--ttatctttgcaattctaaggtaagggtgggattatctttcaataa 20781769  T
Q  114 tcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataaga 213  Q
    | ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| || |||||    
T  20781768 ttataatatatgatttctgaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattttg-aagaaaatgtgtaaga 20781670  T
Q  214 atcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatgt 275  Q
    ||||||||| |||||||||| ||||||||||| ||||||||| || || || ||||||||||    
T  20781669 atcaggtttataatgttgta-tttgatgattattatgatttcctactctatattgttgatgt 20781609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 14 - 261
Target Start/End: Original strand, 24929862 - 24930105
Alignment:
Q  14 aggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatag 113  Q
    |||||||| |||||||||||||||||||| |||||||| ||| ||||||  ||  || ||||| ||||||||||||||||||||||||||||||||||||    
T  24929862 aggcaagg-gagaagaccaagagagaagagcttaggaattgacttgctgcact--ttatctttacaattctaaggtaagggtgggattatctttcaatag 24929958  T
Q  114 tcataatatataatttctgaaaa-ttaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataag 212  Q
    |  |||||||| |||||| |||| |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| || ||| ||| || ||||    
T  24929959 ttctaatatatgatttctaaaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattctg-aaggaaatgtgtaag 24930057  T
Q  213 aatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  24930058 aatcaggtttataatgttgta-tttgatgattagtatgatttcctaatc 24930105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 8 - 261
Target Start/End: Original strand, 28909215 - 28909466
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||  ||||| |||||||||||||||||||||||||| ||||||    
T  28909215 aagctaaggcaaggagagaagaccaagagagaagaacctaggaattgatttgctgtgctt-ttgtcgttgcaattctaaggtaagggtgggatcatcttt 28909313  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaagg 206  Q
    ||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |    
T  28909314 caatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatg 28909412  T
Q  207 tataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
      ||| | |||||||| | | |||||| ||| ||||||||||||||||| |||||    
T  28909413 cgtaaaattcaggtttatgacgttgta-tttaatgattagtatgatttcctaatc 28909466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 8 - 261
Target Start/End: Original strand, 28945610 - 28945861
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||  ||||| |||||||||||||||||||||||||| ||||||    
T  28945610 aagctaaggcaaggagagaagaccaagagagaagaacctaggaattgatttgctgtgctt-ttgtcgttgcaattctaaggtaagggtgggatcatcttt 28945708  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaagg 206  Q
    ||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |    
T  28945709 caatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatg 28945807  T
Q  207 tataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
      ||| | |||||||| | | |||||| ||| ||||||||||||||||| |||||    
T  28945808 cgtaaaattcaggtttatgacgttgta-tttaatgattagtatgatttcctaatc 28945861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 261
Target Start/End: Original strand, 28895967 - 28896218
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||  ||| | |||||||||||||||||||||||||| ||||||    
T  28895967 aagctaaggcaaggagagaagaccaagagagaagaacctaggaattgatttgctgtgctt-ttgccgttgcaattctaaggtaagggtgggatcatcttt 28896065  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaagg 206  Q
    ||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |    
T  28896066 caatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatg 28896164  T
Q  207 tataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
      ||| | |||||||| | | |||||| ||| ||||||||||||||||| |||||    
T  28896165 cgtaaaattcaggtttatgacgttgta-tttaatgattagtatgatttcctaatc 28896218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 261
Target Start/End: Original strand, 28924793 - 28925044
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||  ||| | |||||||||||||||||||||||||| ||||||    
T  28924793 aagctaaggcaaggagagaagaccaagagagaagaacctaggaattgatttgctgtgctt-ttgccgttgcaattctaaggtaagggtgggatcatcttt 28924891  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaagg 206  Q
    ||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |    
T  28924892 caatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatg 28924990  T
Q  207 tataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
      ||| | |||||||| | | |||||| ||| ||||||||||||||||| |||||    
T  28924991 cgtaaaattcaggtttatgacgttgta-tttaatgattagtatgatttcctaatc 28925044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 8 - 261
Target Start/End: Original strand, 28889263 - 28889514
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||  ||||  ||| | |||||||||||||||||||||||||| ||||||    
T  28889263 aagctaaggcaaggagagaagaccaagagagaagaacctaggaattgatttgcattgctt-ttgccgttgcaattctaaggtaagggtgggatcatcttt 28889361  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaagg 206  Q
    ||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |    
T  28889362 caatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatg 28889460  T
Q  207 tataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
      ||| | |||||||| | | |||||| ||| ||||||||||||||||| |||||    
T  28889461 cgtaaaattcaggtttatgacgttgta-tttaatgattagtatgatttcctaatc 28889514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 75 - 252
Target Start/End: Complemental strand, 20820279 - 20820105
Alignment:
Q  75 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaa 174  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||  |||||  |||| ||| ||||||||||||||||| |||||    
T  20820279 ttgcaattctaaggtaagggtgggatcatctttcaatagtgttaatatataatttctgatgattaagtaattcaaccgttcttaaggtaaaatt-ggaaa 20820181  T
Q  175 ataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgat 252  Q
    || ||||||||||||||||||| |||| || | |||||| |||||||| |||||||||| ||||||||| ||||||||    
T  20820180 attagggttaatgatgattttg-aagagaatgcataagattcaggtttataatgttgta-tttgatgatgagtatgat 20820105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 75 - 252
Target Start/End: Complemental strand, 20827379 - 20827205
Alignment:
Q  75 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaa 174  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||  |||||  |||| ||| ||||||||||||||||| |||||    
T  20827379 ttgcaattctaaggtaagggtgggatcatctttcaatagtgttaatatataatttctgatgattaagtaattcaaccgttcttaaggtaaaatt-ggaaa 20827281  T
Q  175 ataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgat 252  Q
    || ||||||||||||||||||| |||| || | |||||| |||||||| |||||||||| ||||||||| ||||||||    
T  20827280 attagggttaatgatgattttg-aagagaatgcataagattcaggtttataatgttgta-tttgatgatgagtatgat 20827205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 76 - 261
Target Start/End: Complemental strand, 34830146 - 34829962
Alignment:
Q  76 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaa 173  Q
    ||||||||||||||||||||||||||||||||||||| |  |||| |||||||||||||||| |||| ||| |||  |||||| ||| |||||||  ||     
T  34830146 tgcaattctaaggtaagggtgggattatctttcaataat-ttaatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaatt--gag 34830050  T
Q  174 aataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
    ||| ||||| | ||| |||||||||||| |||| | ||||||||| ||||    ||||||| ||||||||| |||||||||||||||||    
T  34830049 aattagggtatgatgctgattttgaaag-aaagatgtaagaatcatgtttaatgtgttgtaatttgatgatcagtatgatttcttaatc 34829962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 38144472 - 38144591
Alignment:
Q  18 aaggagagaagaccaagagagaagaacttaggaactgatt-tgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtca 116  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||| ||||  | | |||||  |||||||||||||| || ||||| |||||| |||    
T  38144472 aaggagagaagaccaagagagaagaacttaggaaccgattgtgctgtg-taatcat-tctgcaaaactaaggtaagggtgagactatctctcaataatca 38144569  T
Q  117 taatatataatttctgaaaatt 138  Q
    |||| |||||||||||||||||    
T  38144570 taatctataatttctgaaaatt 38144591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 18407944 - 18408083
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 180  Q
    ||||||||||||| || ||||| |||||| ||||||||||||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 18408041  T
Q  181 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 222  Q
    ||| ||| |||||||||||| || ||| ||||||||| ||||    
T  18408042 gttgatgctgattttgaaaggaatggtgtaagaatcatgttt 18408083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 23111200 - 23111339
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 180  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 23111297  T
Q  181 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 222  Q
    ||| ||| ||||||||||||  | ||| ||||||||| ||||    
T  23111298 gttgatgctgattttgaaagggatggtgtaagaatcatgttt 23111339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 22438746 - 22438802
Alignment:
Q  82 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  22438746 tctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaatt 22438802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 19512441 - 19512387
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 19512387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 28370055 - 28370109
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 28370109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 23528686 - 23528634
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  23528686 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 23528634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 49894 - 50161
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgattt-gctgtgctaattgtctttgcaattctaaggtaagggtgggattatctt 106  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||    
T  49894 aagctaaggcaaagagagaaaaccaagagagaagaacttaggaactgattttgttgtgctatttgtctttgcaattctaaggtaagggtgggattatctt 49993  T
Q  107 tcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaag 205  Q
    |||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49994 tcaatagtcataatatgtaatttctaaaaattaatcaattaaactgttcttaaggtaaaaattgggaaaataagggttaatgatgattttgaaagaaaag 50093  T
Q  206 gtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgat 273  Q
    || |||||||||||||| ||||||| || ||  | |||||||||||||||||||||||||||||||||    
T  50094 gtgtaagaatcaggtttataatgttatatttgaaagattagtatgatttcttaatccatgttgttgat 50161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 8 - 274
Target Start/End: Original strand, 20007872 - 20008138
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  20007872 aagctaaggcaaggagagaagaccaagagagaagaacttaggaactcatttgctgtgctt-ttgtctttgcaattctaaggtaagggtgggatcatcttt 20007970  T
Q  108 caatagtcataatatataatttctgaaaa-ttaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaagg 206  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||    
T  20007971 caatagtcataatatataatttatgaaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaagg 20008070  T
Q  207 tataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatg 274  Q
    |||||| ||||||||| || ||||||||||||||| |||||||| |||||||||| || |||||||||    
T  20008071 tataaggatcaggtttatattgttgtactttgatgtttagtatgttttcttaatctatattgttgatg 20008138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 273
Target Start/End: Original strand, 9099005 - 9099260
Alignment:
Q  14 aggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatag 113  Q
    |||||||| |||||||||||||||||||| |||||||| ||||||||||  ||  || ||||||||||||||||||||||||||||||||||||||||||    
T  9099005 aggcaagg-gagaagaccaagagagaagagcttaggaattgatttgctgcact--ttatctttgcaattctaaggtaagggtgggattatctttcaatag 9099101  T
Q  114 tcataatatataatttctg-aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataag 212  Q
    | ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| || ||||||| || ||||    
T  9099102 ttataatatatgatttctgaaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattctg-aagaaaatgtgtaag 9099200  T
Q  213 aatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgat 273  Q
    |||||||||| |||||||||| ||||||||||||||||||||| ||||| || ||||||||    
T  9099201 aatcaggtttataatgttgta-tttgatgattagtatgatttcctaatctatattgttgat 9099260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 23 - 255
Target Start/End: Original strand, 21364423 - 21364650
Alignment:
Q  23 gagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatat 122  Q
    |||||||||||||||||||||| |||||| || |||||||||||  ||||||||||||||| |||||||||||||||||||| |||| || | |||||||    
T  21364423 gagaagaccaagagagaagaacctaggaattgttttgctgtgctt-ttgtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatat 21364521  T
Q  123 ataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggttt 222  Q
    || ||||||||||||||| ||||| ||||||| ||| |||||||||||| |||| ||||||||||   |||||  |||||||  | ||||| | ||||||    
T  21364522 atgatttctgaaaattaagcaatttaactgtt-ttatggtaaaattggg-aaattagggttaatg-gcatttttgaagaaaatatgtaagacttaggttt 21364618  T
Q  223 ttaatgttgtactttgatgattagtatgatttc 255  Q
     |||||||||| ||||||||||| |||||||||    
T  21364619 ataatgttgta-tttgatgattaatatgatttc 21364650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 23 - 255
Target Start/End: Original strand, 23968405 - 23968632
Alignment:
Q  23 gagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatat 122  Q
    |||||||||||||||||||||| |||||| || |||||||||||  ||||||||||||||| |||||||||||||||||||| |||| || | |||||||    
T  23968405 gagaagaccaagagagaagaacctaggaattgttttgctgtgctt-ttgtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatat 23968503  T
Q  123 ataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggttt 222  Q
    || ||||||||||||||| ||||| ||||||| ||| |||||||||||| |||| ||||||||||   |||||  |||||||  | ||||| | ||||||    
T  23968504 atgatttctgaaaattaagcaatttaactgtt-ttatggtaaaattggg-aaattagggttaatg-gcatttttgaagaaaatatgtaagacttaggttt 23968600  T
Q  223 ttaatgttgtactttgatgattagtatgatttc 255  Q
     |||||||||| ||||||||||| |||||||||    
T  23968601 ataatgttgta-tttgatgattaatatgatttc 23968632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 261
Target Start/End: Complemental strand, 31252549 - 31252300
Alignment:
Q  13 aaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaa--ttgtctttgcaattctaaggtaagggtgggattatctttcaa 110  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |    |||||||||||||||||||||||||||| |||||||||| ||    
T  31252549 aaggcaaggagagaagaccaagagagaagaacttaggaaccgatt-gctgtgttttctttgtctttgcaattctaaggtaagggtgagattatcttttaa 31252451  T
Q  111 tagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataagggt-taatgatgattttgaaagaaaaggt 207  Q
    |  | ||||||||||||||||||||||||||| |||||||  |||||| ||| |||||||  || ||| ||||| | | | |||||||||||| ||||||    
T  31252450 tgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaaatt--gagaattagggtatgaggctgattttgaaag-aaaggt 31252354  T
Q  208 ataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
     ||||||| | ||||    ||||||| ||||||| |  ||||||||||||||||    
T  31252353 gtaagaattatgtttaacgtgttgtaatttgatgctatgtatgatttcttaatc 31252300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 11288596 - 11288721
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||| |||||| |  ||||||| |||||||||||||||||||||||||||||||    
T  11288596 aagctaaggcaagg-gagaagaccaagagagaagagcttaggaactgatt-gctgtgttt-ttgtcttggcaattctaaggtaagggtgggattatcttt 11288692  T
Q  108 caatagtcataatatataatttctgaaaa 136  Q
    ||||  || ||||||||||||||||||||    
T  11288693 caatgatcttaatatataatttctgaaaa 11288721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 15458559 - 15458492
Alignment:
Q  69 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 136  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  15458559 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15458492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 15465154 - 15465087
Alignment:
Q  69 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 136  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  15465154 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15465087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 34639910 - 34640041
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaa--ttgtctttgcaattctaaggtaagggtgggattatct 105  Q
    |||| |||||||||||||||||||||||||||||||||   |||  |||| |||||| |    ||||||| |||||||||||||||||||| || |||||    
T  34639910 aagctaaggcaaggagagaagaccaagagagaagaactagagaatcgatt-gctgtgttttctttgtcttcgcaattctaaggtaagggtgagactatct 34640008  T
Q  106 ttcaatagtcataatatataatttctgaaaatt 138  Q
     |||||| || |||| |||||||||||||||||    
T  34640009 ctcaataatcttaatctataatttctgaaaatt 34640041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 34646584 - 34646715
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaa--ttgtctttgcaattctaaggtaagggtgggattatct 105  Q
    |||| |||||||||||||||||||||||||||||||||   |||  |||| |||||| |    ||||||| |||||||||||||||||||| || |||||    
T  34646584 aagctaaggcaaggagagaagaccaagagagaagaactagagaatcgatt-gctgtgttttctttgtcttcgcaattctaaggtaagggtgagactatct 34646682  T
Q  106 ttcaatagtcataatatataatttctgaaaatt 138  Q
     |||||| || |||| |||||||||||||||||    
T  34646683 ctcaataatcttaatctataatttctgaaaatt 34646715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 28288437 - 28288537
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||| |||||||||||||||||| | |||||||||||||| |||||| |  |||||||||||||||||||||||||||| || ||||| |    
T  28288437 aagctaaggcaagg-gagaagaccaagagagaaaagcttaggaactgatt-gctgtgttt-ttgtctttgcaattctaaggtaagggtgagactatctct 28288533  T
Q  108 caat 111  Q
    ||||    
T  28288534 caat 28288537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 10986173 - 10986235
Alignment:
Q  76 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||||||||||| || |||||||||||| ||||||| |||||||||| ||||||    
T  10986173 tgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaatt 10986235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 24563569 - 24563475
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtg--ctaattgtctttgcaattctaaggtaagggtgggatt 101  Q
    |||| |||||||||||||||||||||||||||||||||  ||||  || ||||||||   |  |||||||||||||||||||||||||||| ||||    
T  24563569 aagctaaggcaaggagagaagaccaagagagaagaactagggaatcga-ttgctgtgttttctttgtctttgcaattctaaggtaagggtgagatt 24563475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 29614146 - 29614201
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  29614146 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 29614201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 4477912 - 4477858
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 4477858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 23839253 - 23839199
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 23839199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 24512836 - 24512898
Alignment:
Q  76 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||| |||||||| |||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  24512836 tgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaatt 24512898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 24641607 - 24641644
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaact 45  Q
    |||| |||||||||||||||||||||||||||||||||    
T  24641607 aagctaaggcaaggagagaagaccaagagagaagaact 24641644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 12168418 - 12168366
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  12168418 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 12168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 19287327 - 19287275
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19287327 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19287275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 19785869 - 19785921
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19785869 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19785921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 19878511 - 19878459
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19878511 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19878459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 930095 - 930150
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    |||||||||||||| || ||||| |||||| ||||||| |||| ||||||||||||    
T  930095 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaatt 930150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 18800493 - 18800438
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    |||| ||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  18800493 ctaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 18800438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 136  Q
    ||||||||||||| || ||||| |||||| || ||||| ||||||||||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 19884287 - 19884235
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    ||||||| |||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19884287 ctaaggttagggtgagactatctctcaataatcataatctataatttctgaaa 19884235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 8 - 273
Target Start/End: Complemental strand, 135568 - 135304
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  135568 aagctaaggcaaggagagaagaccaagagagaagagcttaggaactgatttgctgtgctatttgtctttgcaattctaaggtaagcgtgagattatcttt 135469  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaagg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||    
T  135468 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaaggtaaaattgag-aattaagggttaatgatgattttgaaagaaaagg 135370  T
Q  207 tataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgat 273  Q
    | |||||||||||||| |  ||||||| ||||||| ||||||||||||||||||| |||||||||||    
T  135369 tgtaagaatcaggtttattgtgttgtaatttgatg-ttagtatgatttcttaatctatgttgttgat 135304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 34 - 275
Target Start/End: Original strand, 25180880 - 25181121
Alignment:
Q  34 gagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctga 133  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25180880 gagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctga 25180979  T
Q  134 aaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgta 233  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||   ||||||||| || | |||||    
T  25180980 aaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtatattgatcaggtttatatttttgta 25181079  T
Q  234 ctttgatgattagtatgatttcttaatccatgttgttgatgt 275  Q
    |||||||| ||||||||||||||||||| |||||||||||||    
T  25181080 ctttgatgtttagtatgatttcttaatctatgttgttgatgt 25181121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 36 - 274
Target Start/End: Complemental strand, 10679 - 10441
Alignment:
Q  36 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||| ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10679 gagaaggacttaggaactgatttgctgtgctttttgtctttgaaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 10580  T
Q  136 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 235  Q
    |||||||||||||| |||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| | || |||||| || |||||||||    
T  10579 attaatcaattgaattgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtatagggataaggtttatattgttgtact 10480  T
Q  236 ttgatgattagtatgatttcttaatccatgttgttgatg 274  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  10479 ttgatgtttagtatgatttcttaatctatgttgttgatg 10441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 27207644 - 27207778
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  27207644 aagctaaggcaaggagagaagaccaagagagaagaacttaggaacggatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatcttt 27207743  T
Q  108 caatagtcataatatataatttctgaaaattaatc 142  Q
    ||||  |  |||| |||||||||||||||||||||    
T  27207744 caatgattttaatgtataatttctgaaaattaatc 27207778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 26885312 - 26885179
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| |||||| ||||||  |||||| ||||||||||||||||||||||||||||||||    
T  26885312 aagctaaggcaaggagagaaaaccaagagagaagaacttaggaacggatttgatgtgctttttgtctctgcaattctaaggtaagggtgggattatcttt 26885213  T
Q  108 caatagtcataatatataatttctgaaaattaatc 142  Q
    ||||| || |||| |||||||||||||||||||||    
T  26885212 caataatc-taatgtataatttctgaaaattaatc 26885179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 8 - 261
Target Start/End: Original strand, 23168224 - 23168480
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||| || | |||||||||||  |||| | ||||||||||||||||||||||||||||||||    
T  23168224 aagctaaggcaaggagagaagaccaagagagaagaacttagggacggttttgctgtgctt-ttgtttctgcaattctaaggtaagggtgggattatcttt 23168322  T
Q  108 caatagtcataatatataatttctg-aaaattaatc-aattgaactgttcttaaggt---aaaattgggaaaataagggt-taatgatgattttgaaaga 201  Q
    || |  ||||||| ||||||||||| |||||||||| ||| |||  ||| | ||| |   ||||||  || ||| ||||| | ||| |||||||||||||    
T  23168323 cattgatcataatgtataatttctgaaaaattaatctaatagaatagttttgaagataaaaaaatt--gagaattagggtatgatgctgattttgaaaga 23168420  T
Q  202 aaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
    |||||| ||||| ||| ||||    ||||||| ||||||| | |||||||||||||||||    
T  23168421 aaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatc 23168480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 8 - 261
Target Start/End: Original strand, 23579481 - 23579737
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||| || | |||||||||||  |||| | ||||||||||||||||||||||||||||||||    
T  23579481 aagctaaggcaaggagagaagaccaagagagaagaacttagggacggttttgctgtgctt-ttgtttctgcaattctaaggtaagggtgggattatcttt 23579579  T
Q  108 caatagtcataatatataatttctg-aaaattaatc-aattgaactgttcttaaggt---aaaattgggaaaataagggt-taatgatgattttgaaaga 201  Q
    || |  ||||||| ||||||||||| |||||||||| ||| |||  ||| | ||| |   ||||||  || ||| ||||| | ||| |||||||||||||    
T  23579580 cattgatcataatgtataatttctgaaaaattaatctaatagaatagttttgaagataaaaaaatt--gagaattagggtatgatgctgattttgaaaga 23579677  T
Q  202 aaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
    |||||| ||||| ||| ||||    ||||||| ||||||| | |||||||||||||||||    
T  23579678 aaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatc 23579737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 23265197 - 23265058
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataaggg 181  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| ||  ||||| |  || ||| ||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaat-tgagaattaggg 23265099  T
Q  182 ttaatgatgattttgaaagaaaaggtataagaatcaggttt 222  Q
    || ||| |||||||||||| || ||| ||||||||| ||||    
T  23265098 ttgatgctgattttgaaaggaatggtgtaagaatcatgttt 23265058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 23280265 - 23280126
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataaggg 181  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| ||  ||||| |  || ||| ||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaat-tgagaattaggg 23280167  T
Q  182 ttaatgatgattttgaaagaaaaggtataagaatcaggttt 222  Q
    || ||| |||||||||||| || ||| ||||||||| ||||    
T  23280166 ttgatgctgattttgaaaggaatggtgtaagaatcatgttt 23280126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 27366472 - 27366566
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtg--ctaattgtctttgcaattctaaggtaagggtgggatt 101  Q
    |||| |||||||||||||||||||||||||||||||||  ||||  || ||||||||   |  |||||||||||||||||||||||||||| ||||    
T  27366472 aagctaaggcaaggagagaagaccaagagagaagaactagggaatcga-ttgctgtgttttctttgtctttgcaattctaaggtaagggtgagatt 27366566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 5705947 - 5706075
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaa--ttgtctttgcaattctaaggtaagggtgggattatct 105  Q
    |||| ||||| |||||||||||||||||||||||||||   |||  |||| |||||| |    ||||||| |||||||||||||||||||| || |||||    
T  5705947 aagctaaggctaggagagaagaccaagagagaagaactagagaatcgatt-gctgtgttttctttgtcttcgcaattctaaggtaagggtgagactatct 5706045  T
Q  106 ttcaatagtcataatatataatttctgaaa 135  Q
     ||| || ||||||| ||||||| ||||||    
T  5706046 ctcattaatcataatctataattcctgaaa 5706075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 6483772 - 6483718
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 6483718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 6487239 - 6487185
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 6487185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 21908414 - 21908360
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| |||||| |||| ||||||||||||||||||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaatt 21908360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 26583882 - 26583830
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  26583882 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 26583830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 45 - 273
Target Start/End: Original strand, 16146791 - 16147020
Alignment:
Q  45 ttaggaactgattt-gctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatca 143  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16146791 ttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatca 16146890  T
Q  144 attgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgat 243  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||  |||||    
T  16146891 attaaactgttcttaaggtaaaatttggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttataatgttgtatttgaatgat 16146990  T
Q  244 tagtatgatttcttaatccatgttgttgat 273  Q
    ||||||||||||||||||||||||||||||    
T  16146991 tagtatgatttcttaatccatgttgttgat 16147020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 76 - 261
Target Start/End: Complemental strand, 27906328 - 27906142
Alignment:
Q  76 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaat-caattgaactgttctt-aaggtaaaattgggaa 173  Q
    |||||||||||| |||||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||| |||  |||||| ||| |||||||  ||     
T  27906328 tgcaattctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttcttgaagataaaatt--gag 27906231  T
Q  174 aataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
    ||| ||||| | ||| ||||||||||||||||||| ||||||||| ||||    ||||||| ||||||| |  ||||||||||||||||    
T  27906230 aattagggtgtgatgttgattttgaaagaaaaggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatc 27906142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 14486713 - 14486601
Alignment:
Q  86 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataagggtt 183  Q
    ||||||||||| || |||| ||||||  ||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||||||||||| || ||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaaattgggaatat-agggtt 14486615  T
Q  184 aatgatgattttga 197  Q
     |||||||||||||    
T  14486614 gatgatgattttga 14486601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 53483836 - 53483708
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaa--ttgtctttgcaattctaaggtaagggtgggattatct 105  Q
    |||| ||||| |||||||||||||||||||||||||||   |||  |||| |||||| |    ||||||| |||||||||||||||||||| || |||||    
T  53483836 aagctaaggctaggagagaagaccaagagagaagaactagagaatcgatt-gctgtgttttctttgtcttcgcaattctaaggtaagggtgagactatct 53483738  T
Q  106 ttcaatagtcataatatataatttctgaaa 135  Q
     |||||| ||||||| ||||||| ||||||    
T  53483737 ctcaataatcataatctataattcctgaaa 53483708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 15408196 - 15408140
Alignment:
Q  82 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  15408196 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 15408140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 11848169 - 11848114
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  11848169 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 11848114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 8045832 - 8045884
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| || ||| ||||||| ||||||||||||||    
T  8045832 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa 8045884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 8 - 222
Target Start/End: Original strand, 1837 - 2051
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  1837 aagctaaggcaaggagagaagaccaagagagaagaacttaggaacggatttgctgtgctttttgtctttgcaattgtaaggtaagggtgggattatcttt 1936  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaagg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || |||||||||||||||||||||||||||||||    
T  1937 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttgaaagtaaaattggg-aattaagggttaatgatgattttgaaagaaaagg 2035  T
Q  207 tataagaatcaggttt 222  Q
    | ||||||| ||||||    
T  2036 tgtaagaattaggttt 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 78 - 273
Target Start/End: Complemental strand, 9396 - 9201
Alignment:
Q  78 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaat 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || |    
T  9396 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaaagtaaaattggg-aatt 9298  T
Q  177 aagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgat 273  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||| |  ||||||| ||||||| |||||||||||||| |||| |||||||||||    
T  9297 aagggttaatgatgattttgaaagaaaaggtgtaagaattaggtttattgtgttgtaatttgatgtttagtatgatttctcaatctatgttgttgat 9201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 1126 - 889
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||||| |||| |    
T  1126 aagctaaggcaaggagagaagaccaagagagaagaacctaggaattgatttgctgtgctt-ttgtctttgcaattctaaggtaagggtgggatcatctct 1028  T
Q  108 caatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggt 207  Q
    ||||||| ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||  ||||||| ||||||| ||    
T  1027 caatagtgataatatatgatttctgaaaattaagcaatttaactgttcttatggtaaaattgggaaaattagggttaatggcgattttg-aagaaaatgt 929  T
Q  208 ataagaatcaggtttttaatgttgtactttgatgattagta 248  Q
     ||||| | |||||| ||| |||||  ||||||||||||||    
T  928 gtaagatttaggtttataaagttgt-gtttgatgattagta 889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 10364 - 10156
Alignment:
Q  13 aaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaata 112  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||| | ||||||||||||||||||| ||||||||| |||||    
T  10364 aaggcaaggagagaagaccaagagagaagaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagattatcttccaata 10265  T
Q  113 gtcataatatataatttctgaaaattaatcaattgaactgttcttaag-gtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataa 211  Q
     ||||||||| |||||||||||||||||||||||||| ||||| | ||  ||||||||||  ||| |||||| ||| | ||||||||||  | ||| |||    
T  10264 atcataatatgtaatttctgaaaattaatcaattgaattgttcatgagaataaaattggg--aattagggttgatgctaattttgaaagggatggtgtaa 10167  T
Q  212 gaatcaggttt 222  Q
    |||||| ||||    
T  10166 gaatcatgttt 10156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 492953 - 493162
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||||||||||||||||||||| ||||||||||    
T  492953 aagctaaggcaaggagagaagaccaagagagaagaacttaggaacggatttgctgtgctttttgtctctgcaattctaaggtaagggtgagattatcttt 493052  T
Q  108 caatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataagggt-taatgatgattttgaaagaaaa 204  Q
    ||||| || |||| ||||||||||||||||||||| ||| |||  ||||||  || ||||||   || ||| ||||| ||||| ||||||||||||||||    
T  493053 caataatc-taatgtataatttctgaaaattaatctaatggaatagttcttggagataaaat--agagaattagggtataatgctgattttgaaagaaaa 493149  T
Q  205 ggtataagaatca 217  Q
    ||| |||||||||    
T  493150 ggtgtaagaatca 493162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 69 - 261
Target Start/End: Complemental strand, 1424 - 1234
Alignment:
Q  69 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 168  Q
    |||||||||||||||||||||||||||||||||  |||||||||||  ||||||||  |||||||||||||| ||||| |||||||||||||||||||||    
T  1424 ttgtctttgcaattctaaggtaagggtgggatttcctttcaatagtgttaatatatgctttctgaaaattaaacaatttaactgttcttaaggtaaaatt 1325  T
Q  169 gggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
    |||||||| |||  |||||||||||||| ||||||| |  ||||| ||||||||  |||||| ||  |||||||||||||||||||| |||||    
T  1324 gggaaaattaggtctaatgatgattttg-aagaaaatgcgtaagattcaggtttacaatgttata-attgatgattagtatgatttcctaatc 1234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 42 - 254
Target Start/End: Original strand, 16023 - 16233
Alignment:
Q  42 aacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aaaattaa 140  Q
    ||||||||| ||||||||||||| ||||| |   | ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  16023 aacttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaaattaa 16122  T
Q  141 tcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgat 240  Q
    |||||| ||||||| ||||| ||||| | || || | ||||||||||||||||||| ||||||| ||  ||||||||||||  | |||||||| ||||||    
T  16123 tcaatttaactgtttttaagataaaaattgg-aatttagggttaatgatgattttg-aagaaaatgtgcaagaatcaggttcatgatgttgta-tttgat 16219  T
Q  241 gattagtatgattt 254  Q
    ||||||||||||||    
T  16220 gattagtatgattt 16233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 10125 - 10250
Alignment:
Q  13 aaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaata 112  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||| | |||||||||||||||||||||| ||||| ||||||    
T  10125 aaggcaaggagagaagaccaagagagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaata 10224  T
Q  113 gtcataatatataatttctgaaaatt 138  Q
     ||||||| |||||||||||||||||    
T  10225 atcataatctataatttctgaaaatt 10250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 11042 - 11111
Alignment:
Q  42 aacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaat 111  Q
    ||||||||| ||||||||||||| ||||| |   |  |||||||||||||||||||||||||| ||||||    
T  11042 aacttaggagctgatttgctgtgttaattcttcctaaaattctaaggtaagggtgggattatccttcaat 11111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 1455 - 1580
Alignment:
Q  13 aaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaata 112  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||| | |||||||||||||||||||||| ||||| ||||||    
T  1455 aaggcaaggagagaagaccaagagagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaata 1554  T
Q  113 gtcataatatataatttctgaaaatt 138  Q
     ||||||| |||||||||||||||||    
T  1555 atcataatctataatttctgaaaatt 1580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 87; Significance: 9e-42; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 23 - 255
Target Start/End: Original strand, 91144 - 91374
Alignment:
Q  23 gagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatat 122  Q
    |||||||||||||||||||| ||||| || || |||||||  ||  || ||||||||||||||||||||||||||||| ||||||||||| | |||||||    
T  91144 gagaagaccaagagagaagagcttagaaattggtttgctgcact--ttatctttgcaattctaaggtaagggtgggatcatctttcaataatgataatat 91241  T
Q  123 ataatttctgaaaattaatcaattgaactgttcttaaggt---aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcagg 219  Q
    || ||||||||||||||| ||||| ||||||| ||| |||   ||||||||| |||| ||||||||||   |||||| ||||||| || ||||| | |||    
T  91242 atgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaattggg-aaattagggttaatggcaattttg-aagaaaatgtgtaagatttagg 91339  T
Q  220 tttttaatgttgtactttgatgattagtatgatttc 255  Q
    ||| |||||||||| ||||||||||| |||||||||    
T  91340 tttataatgttgta-tttgatgattaatatgatttc 91374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 23 - 255
Target Start/End: Original strand, 96870 - 97100
Alignment:
Q  23 gagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatat 122  Q
    |||||||||||||||||||| ||||| || || |||||||  ||  || ||||||||||||||||||||||||||||| ||||||||||| | |||||||    
T  96870 gagaagaccaagagagaagagcttagaaattggtttgctgcact--ttatctttgcaattctaaggtaagggtgggatcatctttcaataatgataatat 96967  T
Q  123 ataatttctgaaaattaatcaattgaactgttcttaaggt---aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcagg 219  Q
    || ||||||||||||||| ||||| ||||||| ||| |||   ||||||||| |||| ||||||||||   |||||| ||||||| || ||||| | |||    
T  96968 atgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaattggg-aaattagggttaatggcaattttg-aagaaaatgtgtaagatttagg 97065  T
Q  220 tttttaatgttgtactttgatgattagtatgatttc 255  Q
    ||| |||||||||| ||||||||||| |||||||||    
T  97066 tttataatgttgta-tttgatgattaatatgatttc 97100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 111938 - 111885
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 136  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  111938 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 111885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 261
Target Start/End: Original strand, 5781 - 6035
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaa--ttgtctttgcaattctaaggtaagggtgggattatct 105  Q
    |||| |||||||||||||||||||||||||||||||||  ||||| |||| |||||| |    |||||||||||||||||||||||||||||||||||||    
T  5781 aagctaaggcaaggagagaagaccaagagagaagaactagggaaccgatt-gctgtgttttctttgtctttgcaattctaaggtaagggtgggattatct 5879  T
Q  106 ttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataagggt-taatgatgattttgaaagaa 202  Q
    ||||||  | ||||||||||||||||||||||||||| |||||||  |||||| ||| |||||||  || ||| ||||| | | | |||||||||||| |    
T  5880 ttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaaatt--gagaattagggtatgaggctgattttgaaag-a 5976  T
Q  203 aaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
    ||||| ||||||| | ||||   |||||||| ||||||| |  ||||||||||||||||    
T  5977 aaggtgtaagaattatgtttaacatgttgtaatttgatgttatgtatgatttcttaatc 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 3327 - 3461
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatcttt 107  Q
    |||| ||||||| |||||||||||||||||| ||||||||||||| ||||||| |||||  ||||||||||||||||||||||||||||  |||||||||    
T  3327 aagctaaggcaacgagagaagaccaagagaggagaacttaggaacggatttgccgtgctttttgtctttgcaattctaaggtaagggtgatattatcttt 3426  T
Q  108 caatagtcataatatataatttctgaaaattaatc 142  Q
    ||||     ||||||||||||||||||||||||||    
T  3427 caatgaatttaatatataatttctgaaaattaatc 3461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 125 - 6
Alignment:
Q  14 aggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatag 113  Q
    |||||||| |||||||||||||||||||| |||||||| ||| ||||||  ||  || ||||||||||||||||||||||||||||||||||||||||||    
T  125 aggcaagg-gagaagaccaagagagaagagcttaggaattgacttgctgcact--ttatctttgcaattctaaggtaagggtgggattatctttcaatag 29  T
Q  114 tcataatatataatttctgaaaa 136  Q
    |  |||||||| |||||||||||    
T  28 ttctaatatatgatttctgaaaa 6  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 261
Target Start/End: Original strand, 23562 - 23748
Alignment:
Q  76 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaa 173  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||| ||  |||  |||||| |||  ||||||  ||     
T  23562 tgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatctaaaagaatagttcttgaagacaaaatt--gag 23659  T
Q  174 aataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
    ||| ||||| | ||| ||||||||||||||||| | ||||||||| ||||    ||||||| ||||||| | |||||||||||||||||    
T  23660 aattagggtgtgatgctgattttgaaagaaaagatgtaagaatcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatc 23748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 13880 - 13947
Alignment:
Q  69 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 136  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  13880 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 13947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 111817 - 111686
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaa--ttgtctttgcaattctaaggtaagggtgggattatct 105  Q
    |||| |||||||||||||||||||||||||||||||||   |||  |||| |||||| |    ||||||| |||||||||||||||||||| || |||||    
T  111817 aagctaaggcaaggagagaagaccaagagagaagaactagagaatcgatt-gctgtgttttctttgtcttcgcaattctaaggtaagggtgagactatct 111719  T
Q  106 ttcaatagtcataatatataatttctgaaaatt 138  Q
     |||||| ||||||| |||||||||||||||||    
T  111718 ctcaataatcataatctataatttctgaaaatt 111686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 11850 - 11905
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  11850 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 11905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 40524 - 40725
Alignment:
Q  76 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaat--taatcaattgaactgttcttaaggtaaaattgggaa 173  Q
    ||||| ||||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||  |  | |  |||| ||||||| || ||||| | || |    
T  40524 tgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgttttaacatgaattgttcttgagataaaaattggga 40623  T
Q  174 aataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgat 273  Q
    ||| |||||| ||| |||||||||||| || ||| |||| |||| ||||    ||||||| ||||||| | || |||||||||||||| ||  |||||||    
T  40624 aattagggttgatgctgattttgaaaggaatggtgtaaggatcatgtttaacgtgttgtaatttgatgttcagaatgatttcttaatctataatgttgat 40723  T
Q  274 gt 275  Q
    ||    
T  40724 gt 40725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 261
Target Start/End: Complemental strand, 73347 - 73161
Alignment:
Q  76 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaa 173  Q
    ||||||| | ||||||||||||||||||||||||||  ||||||| |||||||| |||||||||||| ||| | |  | |||| ||| |||||||  ||     
T  73347 tgcaattatgaggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctcttgaagataaaatt--gag 73250  T
Q  174 aataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
    ||| ||||| | ||| ||||||||||||||| ||| ||||||||| ||||    ||||||| ||||||| |  ||||||||||||||||    
T  73249 aattagggtgtgatgttgattttgaaagaaacggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatc 73161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 10546 - 10609
Alignment:
Q  79 aattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 142  Q
    |||||||||||||| ||||||||||||||||||  || |||| |||||||||||||||||||||    
T  10546 aattctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatc 10609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 16875 - 16736
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 180  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 16778  T
Q  181 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 222  Q
    ||| ||| |||||||||||| || ||| ||||||||| ||||    
T  16777 gttgatgctgattttgaaaggaatggtttaagaatcatgttt 16736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 261
Target Start/End: Complemental strand, 135530 - 135349
Alignment:
Q  82 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaat--taatcaattgaactgttcttaaggtaaaattgggaaaataag 179  Q
    ||||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||  |  | |  |||| ||||||| || ||||| | || |||| ||    
T  135530 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgttttaacatgaattgttcttgagataaaaattgggaaattag 135431  T
Q  180 ggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
    |||| ||| |||||||||||| || ||| |||| |||| ||||    ||||||| ||||||| | || ||||||||||||||    
T  135430 ggttgatgctgattttgaaaggaatggtgtaaggatcatgtttaatgtgttgtaatttgatgttcagaatgatttcttaatc 135349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 770 - 717
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 136  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  770 ctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 85 - 261
Target Start/End: Complemental strand, 13019 - 12833
Alignment:
Q  85 aaggtaagggtgggattatcttt-caatagtcataatatataatttctgaaaa-ttaatcaa---ttgaactgttcttaa-ggtaaaatt--gggaaaat 176  Q
    ||||||||||||||||||||||| |||||||  |||||||| |||||| |||| |||||| |   || |||||||||||| ||||||| |  |||||| |    
T  13019 aaggtaagggtgggattatctttacaatagttctaatatatgatttctaaaaaattaatctaaattttaactgttcttaaaggtaaaaattggggaaatt 12920  T
Q  177 aagggttaatg-atgattttgaaagaaaaggtataagaatc-aggtttttaatgttgtactttgatgattagtatgatttcttaatc 261  Q
     |||||||||| |||||| |||| |||| |   |||||||| |||||| |||||||||| ||  ||||||||||||||||| |||||    
T  12919 tagggttaatgtatgattctgaaggaaatgtgttaagaatctaggtttataatgttgtatttgtatgattagtatgatttcctaatc 12833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 13687 - 13548
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 180  Q
    ||||||||||||| || ||||| |||||| || ||||| |||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 13590  T
Q  181 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 222  Q
    ||| ||| |||||||||||| || ||| ||||||||| ||||    
T  13589 gttgatgctgattttgaaaggaatggtgtaagaatcatgttt 13548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 45198 - 45326
Alignment:
Q  8 aagcaaaggcaaggagagaagaccaagagagaagaacttaggaactgatttgctgtgctaa--ttgtctttgcaattctaaggtaagggtgggattatct 105  Q
    |||| ||||| |||||||||||||||||||||||||||   |||  |||| |||||| |    ||||||| |||| ||||||||||||||| || |||||    
T  45198 aagctaaggctaggagagaagaccaagagagaagaactagagaatcgatt-gctgtgttttctttgtcttcgcaaatctaaggtaagggtgagactatct 45296  T
Q  106 ttcaatagtcataatatataatttctgaaa 135  Q
     |||||| ||||||| ||||||| ||||||    
T  45297 ctcaataatcataatctataattcctgaaa 45326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 116951 - 116877
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 157  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 116877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 22536 - 22646
Alignment:
Q  26 aagaccaagagagaagaacttaggaactgattt-gctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatat 124  Q
    ||||||||||||||||| | ||||||| ||||| ||||||| |  | |||  |||| || |||||||||||| || ||||| |||||| ||||| |||||    
T  22536 aagaccaagagagaagagcctaggaaccgattttgctgtgcaatatttct--gcaaatccaaggtaagggtgagactatctctcaataatcatagtatat 22633  T
Q  125 aatttctgaaaat 137  Q
    |||||||||||||    
T  22634 aatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 750 - 805
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  750 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 8 - 147
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 180  Q
    ||||||||||||| || ||||| |||||| || ||||| |||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 105  T
Q  181 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 222  Q
    |||  || |||||||||||| || ||| ||||||||| ||||    
T  106 gttgttgctgattttgaaaggaatggtgtaagaatcatgttt 147  T

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Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 11397 - 11342
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  11397 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 11342  T

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Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 30913 - 30858
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  30913 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 30858  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 101928 - 102002
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 157  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||| ||||||||| ||| ||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattgaattgttctt 102002  T

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Target: scaffold0796 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 1691 - 1784
Alignment:
Q  42 aacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    ||||||||| ||||||||||||| ||||| |   | |||  |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  1691 aacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 1784  T

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Target: scaffold0796; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 5714 - 5807
Alignment:
Q  42 aacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    ||||||||| ||||||||||||| ||||| |   | |||  |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  5714 aacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 5807  T

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Target: scaffold0310 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 17700 - 17644
Alignment:
Q  82 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||||| || ||||| ||||||  |||||| |||||||||||||||||    
T  17700 tctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaatt 17644  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 14398 - 14450
Alignment:
Q  86 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 14450  T

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Target: scaffold0456 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 987 - 932
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    |||||||||||||| || ||||| |||||| ||||||| |||| ||||||||||||    
T  987 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaatt 932  T

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Target: scaffold0456; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 8132 - 8077
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    |||||||||||||| || ||||| |||||| ||||||| |||| ||||||||||||    
T  8132 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaatt 8077  T

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Target: scaffold0090 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 18225 - 18170
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||| ||||||||    
T  18225 ctaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaatt 18170  T

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Target: scaffold1461 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 1485 - 1543
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 142  Q
    ||||||||||||| ||||||||| ||||  || ||||||  ||||||||||||||||||    
T  1485 taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc 1543  T

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Target: scaffold0317 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 1441 - 1387
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || |||||||||||  |||| ||||||||||| ||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaatt 1387  T

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Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 34276 - 34330
Alignment:
Q  84 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 138  Q
    ||||||||||||| || ||||| || ||| ||||| |||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaatt 34330  T

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Target: scaffold1773 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 1242 - 1181
Alignment:
Q  74 tttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||  |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  1242 tttgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 1181  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 1897 - 1950
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 136  Q
    |||||||||||||| || ||| | |||||| ||||||| |||||||||||||||    
T  1897 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaa 1950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 8574 - 8627
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 136  Q
    |||||||||||||| || ||| | |||||| ||||||| |||||||||||||||    
T  8574 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaa 8627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 346 - 294
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| ||||||  |||||| ||||||||||||||    
T  346 ctaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa 294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 50234 - 50182
Alignment:
Q  83 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 135  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  50234 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 50182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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