View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10541_low_17 (Length: 282)
Name: NF10541_low_17
Description: NF10541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10541_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 37855747 - 37856002
Alignment:
| Q |
18 |
atatggggttgaaagttttgtttcacaagtattgtcatccaaaccctcaacacaaaataagttattgtatggatgcccaaactccacgattagccattgc |
117 |
Q |
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| T |
37855747 |
atatggggttgaaagttttgtttcacaagtattgtcatccaaaccctcaacacaaaataatttattgtatggatgcccaaactccacgattagccattgc |
37855846 |
T |
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| Q |
118 |
cttcccctcttcaagaatgtcacacacacccaacttcatctatataccttataatcatgtcacatcaacacacttaggatatcatatactcgctttcatg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
37855847 |
cttcccctcttcaagaatgtcacacacacccaacttcatctataaaccttataatcatgtcacatcaacacacttaggatatcatatactcactttcatg |
37855946 |
T |
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| Q |
218 |
atatgatatctcacataagaatctttttctcaatccacattaatttggtcctttgc |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
37855947 |
atatgatatctcacataagaatctttttctcaatccacattaatttggttctttgc |
37856002 |
T |
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