View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10541_low_22 (Length: 258)
Name: NF10541_low_22
Description: NF10541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10541_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 14 - 243
Target Start/End: Original strand, 48255227 - 48255456
Alignment:
| Q |
14 |
agaagtattaggtagaagcacagtggatgccaatgtagcatagttggctccatgtttataataagatcctattgattgtagatatggactcaaaaatgga |
113 |
Q |
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| T |
48255227 |
agaagtattaggtagaagcacagtggatgccaatgtagcatagttggctccatgtttataataagatcctattgattgtagatatggactcaaaaatgga |
48255326 |
T |
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| Q |
114 |
attccaatagcttgagctgccagaatcaaataaataaaaatgtttgattgtttaataaattatatatagctctcaaccattaaattatgtctctaatcat |
213 |
Q |
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| T |
48255327 |
attccaatagcttgagctgccagaatcaaataaatataaatgtttgattgtttaataaatgatatatagctctcaaccattaaattatgtctctaatcat |
48255426 |
T |
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| Q |
214 |
ggtgaatgacatcacataccaagatataca |
243 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
48255427 |
ggtgaatgacatcacataccaagatataca |
48255456 |
T |
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