View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10542_high_4 (Length: 291)
Name: NF10542_high_4
Description: NF10542
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10542_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 18 - 286
Target Start/End: Original strand, 31792428 - 31792696
Alignment:
| Q |
18 |
ctatgtacatactacgttccgaatccaaattatttctaggcagcttaccaagatgtttcaatgttttgtatttttgtgtaccttacaatgtatttaacat |
117 |
Q |
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| T |
31792428 |
ctatgtacatactacgttccaaatccaaattatttctaggcagcttaccaagatgtttcaatgttttgtatttttgtgtaccttacaatgtatttaacat |
31792527 |
T |
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| Q |
118 |
ctttcttggcttgtaagcttcgtagacagagcattgaaattatgtcatggctttcttgttctaatatatatagctttgatgcttgattaatgccaaggcc |
217 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31792528 |
ctttcttggcttgtaagcttcgtagacagagcattgacattatgtcatggctttcttgttctaatatatatagctttgatgcttgattaatgccaaggcc |
31792627 |
T |
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| Q |
218 |
actataacaaaaccttatttcgaccttgctgttattttgagcatgagttttcactccgcctatgctact |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
31792628 |
actataacaaaaccttatttcgaccttgctgttattttgagcatgagttttcactccgcctacgctact |
31792696 |
T |
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