View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10542_high_7 (Length: 244)
Name: NF10542_high_7
Description: NF10542
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10542_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 23 - 234
Target Start/End: Original strand, 34387997 - 34388208
Alignment:
| Q |
23 |
gggctcggagaagaacttgttgacagacggcatcacctgaggtggtttattgcggaggaactttctgactctgtgttcagcatacgcctcgccctcagca |
122 |
Q |
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| T |
34387997 |
gggctcggagaagaacttgttgacagacggcatcacctgaggtggtttattgcggaggaactttctgactctgtgttcagcatacgcctcgccctcagca |
34388096 |
T |
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| Q |
123 |
tggttctcaagcacacctgcaattctgttctgtttgtttaccctgaaaaccaattgaattcaatataatacattcatcagaataaaactaggctcaagtt |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
34388097 |
tggttctcaagcacacctgcaattctgttctgtttgtttaccctaaaaaccaattgaattcaatatattacattcatcagaataaaactaggctcaagtt |
34388196 |
T |
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| Q |
223 |
caatcttcattt |
234 |
Q |
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|||||||||||| |
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| T |
34388197 |
caatcttcattt |
34388208 |
T |
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