View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10542_low_32 (Length: 224)
Name: NF10542_low_32
Description: NF10542
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10542_low_32 |
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Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 15 - 206
Target Start/End: Original strand, 43311927 - 43312118
Alignment:
| Q |
15 |
cagagacactataggataatgattcgaaacatgcaattttgactttgctttgaaaggaagtgaggagcttccaaggaaactacgttccctacaaatatgg |
114 |
Q |
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| T |
43311927 |
cagagacactataggataatgattcgaaacatgcaattttgactttgctttgaaaggaagtgaggagcttccaaggaaactacgttccctacaaatatgg |
43312026 |
T |
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| Q |
115 |
gtctgatgctccttttcatgtgcatagctttttattccataccttcttttccccttcctacgatgaaccaagagacttccaaaacaaataac |
206 |
Q |
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| T |
43312027 |
gtctgatgctccttttcatgtgcatagctttttattccataccttcttttccccttcctacgatgaaccaagagacttccaaaacaaataac |
43312118 |
T |
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