View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10542_low_38 (Length: 212)
Name: NF10542_low_38
Description: NF10542
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10542_low_38 |
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Alignment Details
Target: chr2 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 37658242 - 37658134
Alignment:
| Q |
85 |
cttgtgaattacaccattttcttcctagttcctagactaaaatgtatacataaagaaacaaaatagttgaaacagagcatgtcaatgagcaacaacacca |
184 |
Q |
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| T |
37658242 |
cttgtgaattacaccattttcttcctagttcctagactaaaatgtatacataaagaaacaaaatagttgaaacagagcatatcaatgagcaacaccacca |
37658143 |
T |
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| Q |
185 |
ccaccatca |
193 |
Q |
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||||||||| |
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| T |
37658142 |
ccaccatca |
37658134 |
T |
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