View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10546_low_16 (Length: 223)
Name: NF10546_low_16
Description: NF10546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10546_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 6697497 - 6697309
Alignment:
| Q |
19 |
aattttaggggtctaggtaagtatcatttaagagctggtgtttgataaaatttaatcctgcaaaatgctgcaggctgtagactgtactgtttgttttttg |
118 |
Q |
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| T |
6697497 |
aattttaggggtctaggtaagtatcatttaagagctggtgtttgataaaatttaatcctgcaaaatgctgcaggttgtagactgtactgtttgttttttg |
6697398 |
T |
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| Q |
119 |
tgtttggtctctcatgtgaaggctaaattttttgaggttaacttttaggcttggtgagtcttgtgcttgtgtctttgaactgtattcat |
207 |
Q |
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| T |
6697397 |
tgtttggtctctcatgtgaaggctaaattttttgaggttaacttttaggcttggtgaatcttgtgcttgtgtctttgaactgtattcat |
6697309 |
T |
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