View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10547_high_3 (Length: 286)
Name: NF10547_high_3
Description: NF10547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10547_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 38752106 - 38752340
Alignment:
| Q |
1 |
atttattagtaaattcaccacctgcatagatcaacacaatgcttatgtattttttctcttttaatagccaaaattttattagaaactcaaaccagtgcat |
100 |
Q |
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| T |
38752106 |
atttattagttaattcaccacctgcatagatcaacacaatgcttatgtattttttctcttttaatagccaaaattttattagaaactcaaaccagtgcat |
38752205 |
T |
|
| Q |
101 |
caataatacaccaactatattaactgcgcgaatttgacagaataacagtttgccacgtcttggtttcggcaaaa---actacactttgaatcttaaacaa |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
38752206 |
taataatacaccaactatattaactgcgcgaatttgacagaataacagtttgccacgtcttggtttcggcaaaaactactacactttgaatcttaaacaa |
38752305 |
T |
|
| Q |
198 |
aacctcgatgccatcgtgattttgtcaaatatatt |
232 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
38752306 |
aacctcgatgccatcgtgattttgtcaaatatatt |
38752340 |
T |
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